Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 134 4e-26 seq224 111 5e-19 seq504 89.7 2e-12 >seq1 Length=4954631 Score = 134 bits (148), Expect = 4e-26 Identities = 193/272 (71%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||| | | ||||| | ||| |||||||| ||||| || | ||| || || || Sbjct 156652 TCTTCGAGAGCCTTGACCAGACGTCGCTGAATGTAACCTGTCTCGGCTGTCTTGACGGCG 156593 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 |||||||| ||||| | | |||| |||| || ||||| || | ||| ||| || Sbjct 156592 GTATCAATGAGACCTTCTCTACCAGCCATGGCGTGGAAAAAGAACTCGGAGGGTGTGAGA 156533 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | || | | ||| |||| ||||||||||| |||||||| || | ||| ||| || Sbjct 156532 CCACGAAGATATGAGTTCTCGACGAAACCACGAGCCTCGGGAGAGTAATCGTCCTTTGTG 156473 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 || |||||||| || | || || | ||| | ||||||||||| || || ||| ||||| Sbjct 156472 AAATGTGGCAGAGTTCGGTACTTGAAACCGAACGGGATACGCTTGCCTTCCACGATCTGC 156413 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || || | | || |||||||||| || || Sbjct 156412 TGGCCGACGAGCGCCGTCATCTGCGAGATGTT 156381 >seq224 Length=800728 Score = 111 bits (122), Expect = 5e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 ||||||| ||| ||||| | ||||||||||| ||||||||||||||| | Sbjct 538231 TTCCTTGCATTCGTAAGAAGGCCGACTGGGCTATCCGGTGGATCCAGGACAAGGACTCCT 538172 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 |||||| ||||||||||| || |||| || ||||| || || |||||||| || | Sbjct 538171 CCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGCGCCT 538112 Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616 | ||| || || ||||| || ||||||||| | | || || ||| || || |||| Sbjct 538111 TTGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCAACG 538052 Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 | || || || | ||||| | || ||||| || || ||| Sbjct 538051 AGCTCATCTCTCGTGACGAAGGTCTCCACACTGATTTCGCC 538011 >seq504 Length=729665 Score = 89.7 bits (98), Expect = 2e-12 Identities = 385/597 (64%), Gaps = 20/597 (3%) Strand=Plus/Plus Query 251402 AGGCG--ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATA 251459 ||||| ||||| ||||| | | ||| | ||||| | | | ||||| ||| | || | Sbjct 64644 AGGCGTCATAAGTCCACAGATCTCACAAATGTGGACTCGGAACGCATCCGATACCTCGAA 64703 Query 251460 TAGCCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTC 251519 | || |||| |||| | |||||||| | ||||||||||||||| |||||||| Sbjct 64704 CAATCGCTCCTTCAAGAAGGCTGCCGCACCGTGGGCAATCATACAATCACGTTCCATTTC 64763 Query 251520 ACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGA-GATTAA 251578 |||||||| | |||||||| | || | |||||| ||||||| | || | |||| Sbjct 64764 TCCGAAACGCAACCCACCATCTCTCGCACGACCCTCCACAGGCTGCCTGGTCATGATT-T 64822 Query 251579 CCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGT 251638 || || ||| | || || ||| || | ||||| || || ||||||| Sbjct 64823 GCACTGGCCCGCGAGCTCGTGCGTGAATCTTGTCGTCCACCATGTGGCGCAGTCGCTGGT 64882 Query 251639 AGAATGCGGGACCGATGAAGATGCTCGAAGGCATTTGCT---CTCCAGTTAGAGCGTTAT 251695 || ||| || || | ||||| || | | | | ||| ||||| | | || | Sbjct 64883 AGTATGTCGGGCCAAAGAAGA-CCTGG--GCCCTAAGCTTACGACCAGTGTGGCCATTGT 64939 Query 251696 ACATAACTTCGTTTCCATTAGATTCATAACCAAGTTTCTGTAGC---TCTGAAGCAATAT 251752 |||| | ||| || ||||| ||| ||| | || | ||| || || | || Sbjct 64940 ACATGATCTCGAAGCCTCGAGATTGATAGCCATGCTTGCGAAGCAGATCAGACACCGAAT 64999 Query 251753 CACCAATCTTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACA 251812 ||| | | | | | || ||| ||||||| | | ||| | | ||| Sbjct 65000 ---CAACCGTCACATCCGTGAACGGGGTTGCGTCTCCCTCCATTCCCTCGAGCGTTGACA 65056 Query 251813 CTTTGCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGG 251872 | |||| || | ||| ||| || || || |||||||| || ||||| |||| Sbjct 65057 CCTTGCTCAATAAGCACTCAATCAAATGTGCAATTGTCATACGGGACGGGATAGCGTGGG 65116 Query 251873 GATTGATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAA 251932 | ||||||||||| || || | || || ||| | ||| ||||||| ||| | || Sbjct 65117 GGTTGATGATGATATCCGGCGTTAGACCCTCACGCGAGAAAGGCATAT-CTTCTTGTCGG 65175 Query 251933 TAATGTT--TCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | ||||| ||||| || ||||| |||||||| ||||| |||||| |||||||| Sbjct 65176 T-ATGTTACACCAATCGTACCCTTCTGTCCGTGGCGAGAGGCGAACTTGTCACCAAT 65231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471790558111258