Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq769 159 4e-33
seq224 118 1e-20
seq1 116 5e-20
seq658 102 1e-15
seq991 93.3 5e-13
>seq769
Length=2557781
Score = 159 bits (176), Expect = 4e-33
Identities = 275/396 (69%), Gaps = 9/396 (2%)
Strand=Plus/Minus
Query 18100 GGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCC-GTGCATGCC 18158
|||||||| ||||| |||| |||||||||||| | ||||| | || |||
Sbjct 2165399 GGCGAGTCCCACGGCAAATCCGTCTCGTGCATCATCGACAACTGCCCGCCCGGGCTCGCC 2165340
Query 18159 ACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACT 18218
|| |||||| |||||||| || ||| | ||||| || ||||||||| | |
Sbjct 2165339 T-TGACCGAGGATGACATCCAACCGCAGCTCACGCGGCGGCGGCCGGGCCAGTCGTCCAT 2165281
Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278
| ||||||||||||||| || ||||||| |||||| |||||||| ||| ||||||
Sbjct 2165280 CACGACGCCGCGCAACGAGAAGGACCGCGTCACCATCCACTCGGGCACCGAGGACGGCCG 2165221
Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338
|| ||||||| | | || || ||| |||| |||||||||||| |||||
Sbjct 2165220 CA-GCTCGGCACCCTGATCTTGCTGACGGTGCCCAATGAGGACCAGCGGCCCAAGGACTA 2165162
Query 18339 TTCCGACATGTGCAAGG------TGCCGCGGCCCTCACACGCCGACTACACCTACATGGC 18392
|||| | || | | || || ||| |||||||||| |||||| | |
Sbjct 2165161 CGGCGACCAGACCATCGACCTGTTCCCCCGCCCCAGCCACGCCGACTGGACCTACCTCGA 2165102
Query 18393 CAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCAT 18452
|||||||||| |||||| || ||||| ||| || ||||||||||||| |
Sbjct 2165101 GAAGTACGGCACCAAGGCCAGCTCCGGCGGCGGCAGGAGCAGTGCCCGCGAGACCATTGC 2165042
Query 18453 GCGCGTCGCCGCCGGCGCGGTCGCCGAGAAATGGCT 18488
|| |||||||| ||||| ||||||||||| |||||
Sbjct 2165041 CCGGGTCGCCGCTGGCGCCGTCGCCGAGAAGTGGCT 2165006
Score = 147 bits (162), Expect = 3e-29
Identities = 323/486 (66%), Gaps = 15/486 (3%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| ||||| | ||||||| ||| ||||| || |||||||| || || ||||||||
Sbjct 972090 CTGGTCCACGTATCTAGCCGTGTTGTTGAAGACACGAAGCATGGGGACCAGACCGTTGGA 972149
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|||||||||||| || | ||| | ||| | || || | ||| || | ||
Sbjct 972150 TGTGCCGTTGGTGCCGGCAATGTACGAGCCAGTAGCACGAATGCGGTGGACGTTGAGACC 972209
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| ||||||||| ||||||||| | || || ||||| |||||||| || || ||
Sbjct 972210 GATACCGCCGGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAAATACCGTC 972269
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| ||| |||||||||| || || ||||| || || || | || | |||||
Sbjct 972270 AATGCTGTCATCCTTCATGTCTACCAGGAAGCAGGAGGACAGCTGGGACTGGGGAGTGCC 972329
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|| || ||||| ||||| | || ||||| |||| | ||||||| || ||||||
Sbjct 972330 CGCATTAAAGAGGGTGGGGGAAGCATGCGTGAAGAACTTGCTCGACATGAGGTTGTAGGT 972389
Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424
| | || ||| || | || | | || || ||||| || ||
Sbjct 972390 CTCAATGACACGC------------TCGATGTTGTC---TCCCCAGATGCCGACAGCAAC 972434
Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484
||||| | ||||| |||||| |||||||||| |||| | |||| ||||| ||
Sbjct 972435 ACGCATAATCATGTGCTGGGGACGCTCGACGATCTTGCCGTCGAGCTTGAGAAGGTATGA 972494
Query 1630485 CCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGATGGC 1630544
|| | ||| ||| ||||||||| || |||||||| |||| | |||||
Sbjct 972495 GCGCTCTAGTGTCTTGAAGCCAAAGTACTGGTAGTTGAAATCGCGATCGTAGACAATGGC 972554
Query 1630545 GGCGTC 1630550
| |||
Sbjct 972555 CGAGTC 972560
Score = 91.5 bits (100), Expect = 2e-12
Identities = 303/475 (64%), Gaps = 10/475 (2%)
Strand=Plus/Plus
Query 1628131 TTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGACGATCTCGGTGCACAGGTTGGCC 1628190
|||||| ||||| || ||||| || ||| || || || ||||| |||||||
Sbjct 971620 TTGCAAACAGCCACCTCATCGGGCGCACAATACTCGATAATTTCCGTGCAAAGGTTGGAG 971679
Query 1628191 GACGTCG--TCGTACCCAGGTTCTGCTGGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGA 1628248
| ||| | || |||||||||| ||||||| | | ||||| | ||||||| ||
Sbjct 971680 --CTTCGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGA 971737
Query 1628249 GCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGATGGCCGACCAGATCTGGCGCG 1628308
||||| |||| ||||||||| |||| ||| | | ||||| |||||| || | |
Sbjct 971738 GCATGAAGGGGTTGCCGGTCTCAGTCTGGGCCTCCAGGATGGAGTACCAGAGCTTCTGAG 971797
Query 1628309 CGGGCACGACAGTCC-GCG--CGCGGCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAA 1628365
| | || ||| ||| | || |||| || |
Sbjct 971798 C---CTTGATTGTCTTGCGACCACGACCCTCCTGCTCGTACTTCTCGTACAAGGCTTCGA 971854
Query 1628366 AGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGT 1628425
| || |||||||||| || |||||||| |||| || || | | | ||| |
Sbjct 971855 ACTCCTCGCCGTAGCAGTCAGCGAGGCCGGGGCACTCGTTGGGGCACATCAAAGTCCATT 971914
Query 1628426 CGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGT 1628485
||||| || | | || ||| || ||||| |||| || || | || | ||
Sbjct 971915 CGCCATTCTTCTCAACACGCTTCATGAACAGGTCGGGAATCCAAAGAGCCAAGAACAAGT 971974
Query 1628486 CGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGT 1628545
| || || ||| |||||||||||||||||||| || || || |||||| | |
Sbjct 971975 CACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTGCGCAGATCAAGAAAGTCGAAGACAT 972034
Query 1628546 CGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
| |||||||||||||| |||||| ||| |||||||| ||||||| ||| ||
Sbjct 972035 CAGCGTGCCACGGCTCGAGGTAGATGGCGAAGGCGCCAGGGCGCTTGTTGCCACC 972089
>seq224
Length=800728
Score = 118 bits (130), Expect = 1e-20
Identities = 178/251 (71%), Gaps = 4/251 (2%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| ||| | |||||| |||||| |||||||||||||| |||| |||||
Sbjct 537715 GCCTTCTGGTAATCGGCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATG 537774
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGA--GCGACG 868808
|||||| | ||| ||||||| ||||||| ||| || || | |||| |
Sbjct 537775 TTCTCCATGAAGTCGAAGGGGTTGGAGACCTTGTAGACCTTGTCATTGCCCAAGGCGATG 537834
Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868
||||| || || ||||| |||||||||||||| ||| ||| || ||||||||| |
Sbjct 537835 --AGCAGACGATCAGCGACGAACTCGATGTACTGCTTCATCAGGGTGGAGTTCATGCCCA 537892
Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928
|| || || || | |||| ||| || || | |||||| |||||| ||| ||
Sbjct 537893 GCAGGGCGCAGGGAAGGGCCTCGGTCAAGAATTCCTGCTCGATAGTGACGGCATCGGTGA 537952
Query 868929 TGATCTGCCTG 868939
|||||| ||||
Sbjct 537953 TGATCTCCCTG 537963
Score = 107 bits (118), Expect = 2e-17
Identities = 142/195 (73%), Gaps = 9/195 (5%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||||||||| ||| ||| | |||||| |||| || |||||||| || || |||||
Sbjct 538029 ACCTTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATCAGACCACGCTT 538088
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||||| | || ||| ||| ||||| ||||| ||||| || ||
Sbjct 538089 CTTGAGCCAGAAGATGGAGGCAAAGGCGCCACTGAAGAAGATACCCTCAACGGCAGCGAA 538148
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATCGC 869355
| | | ||| |||| ||||||| | ||| |||||| | ||||||| || ||
Sbjct 538149 GGCAACGAGACGCTGAGCAAAGGAG--GAG----TCCTTGTCCTGGATCCACCGGATAGC 538202
Query 869356 CCAGTCGGCCTTTTT 869370
|||||||||||| ||
Sbjct 538203 CCAGTCGGCCTTCTT 538217
>seq1
Length=4954631
Score = 116 bits (128), Expect = 5e-20
Identities = 91/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||| | ||||| |||||||||||||| |||| || |||| |||||| | || ||||||
Sbjct 2518863 GCCTCAAACTATCTCGACATCAAGCCCTTGCTGGACGTTGGCTGCAAGACCGTTGCCAAC 2518922
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
||||||||||||||||| || |||||||| || |||||||| || ||||
Sbjct 2518923 ATGATCAAGGGCAAGTCCCCAGAGGAGATTCGAAAGACCTTCAATATCA 2518971
>seq658
Length=2797339
Score = 102 bits (112), Expect = 1e-15
Identities = 216/314 (69%), Gaps = 10/314 (3%)
Strand=Plus/Plus
Query 450778 CGCACCGGCCGCGTTTGGCCGATGCGGTGCACGCGGTCGACGGCCTGCGCCTCGGCAAAC 450837
|| || || ||||| ||||||| |||||| |||||||||||||||||||||||||| |
Sbjct 671953 CGGACAGGGCGCGTCTGGCCGAGGCGGTGGACGCGGTCGACGGCCTGCGCCTCGGCGGCC 672012
Query 450838 GGATTGTAGTGCGCGTCCATGA-GCAGCACATAGTTGGCGCACACGAGGTTGAGGCCGAC 450896
|| ||||| || | ||||||| | || || |||| || | |||||||||||||
Sbjct 672013 GGGTTGTACTGGGGCTCCATGACGTAG-ACGCTGTTGCCGGCCGTCAGGTTGAGGCCGAG 672071
Query 450897 GCTGCCCACGCCGATGGTCATCAGGAGGCAGCGCGCGTCGGCGTCGCTCG-TGAAGCGGT 450955
|| |||| | ||||| | |||| | || ||| ||| |||| |||| ||
Sbjct 672072 GCCGCCCGCCATGATGGAGACGAGGATGACCTGCACGTTCCTGTC-CTCGCGGAAGGCGT 672130
Query 450956 CGACGAGCGCGTTGCGCCGTTCGATCTGTCGCACGCCGCCGTCGATGCGCACGTAGCCGA 451015
| | | ||| ||||| || | | || || |||||||| ||| | || ||
Sbjct 672131 CCATGGCGGCGGTGCGC---GCGGTGCGCGTCATGCTGCCGTCGAGCCGCGTGAAGGTGA 672187
Query 451016 CCCCCACGCGCGTGATCACGGCGCTCTCGATCAGGTCCAGGTAGGTCGACCACTGGGAAA 451075
||| || |||| | | |||| ||||||||||||||||| | || ||| || |
Sbjct 672188 TTCCCGCG-GCGT--TGAGGGCGAACTCGATCAGGTCCAGGTGCGACGTCCAGCCCGAGA 672244
Query 451076 AGACCACCATCTTG 451089
|||| ||| ||||
Sbjct 672245 AGACGACCGACTTG 672258
>seq991
Length=2046878
Score = 93.3 bits (102), Expect = 5e-13
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 18358 CCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCG 18417
|| || ||||| |||||||||| || ||| | | ||||| || |||||||| || ||
Sbjct 358572 CCACGCCCCTCCCACGCCGACTGGACTTACCTTGAGAAGTATGGTATCAAGGCCTCCTCT 358513
Query 18418 GGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCC 18477
||||| |||||| ||||||||||| | ||||| ||||||||||| || |||
Sbjct 358512 GGCGGCGGCCGGAGCAGCGCCCGCGAGACTATTGCCCGCGTTGCCGCCGGCGCTGTTGCC 358453
Query 18478 GAGAAATGGCT 18488
||||| |||||
Sbjct 358452 GAGAAGTGGCT 358442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107021519244578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |