Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq1102 114 8e-21
>seq1102
Length=1535874
Score = 114 bits (126), Expect = 8e-21
Identities = 151/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| ||||||||||| || || ||||| || ||| || ||||| | || ||||| ||
Sbjct 933196 TGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGTGCGCCCATCCTCCAACTGC 933255
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAAT-TTT 33665
|| || ||||| ||||| |||||||| || | || | ||| || ||||| ||| ||
Sbjct 933256 TTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGAATCTTG 933315
Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724
|| || || | ||| | ||||||||| || || || |||| ||||| ||||| || |
Sbjct 933316 CTCTT--GACGTTGTCGATGGTGTCGCTCGACTCAACCTCAAGAGTGATGGTTTTGCCAG 933373
Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750
| | || || |||||||||||||||
Sbjct 933374 TCAGGGTCTTGACAAAGATCTGCATA 933399
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | ||||| || || ||| || || || |||||||| |||
Sbjct 933399 ACCACCACGGAGACGAAGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCT 933458
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||| || |||| || | || ||||| ||||| || | |||||||| || | ||
Sbjct 933459 CAATGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGG 933518
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| || || ||| ||| ||| | ||| ||| | ||||| ||| || |
Sbjct 933519 AATGCCTTCCTTATCCTGAATCTTCGATTTGA-CATTGTCGATCGTGTCTGATGACTCGA 933577
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || | |||||| || ||||||||||||
Sbjct 933578 CCTCCAGGGTGATTGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCATA 933627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328698255281280
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |