Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq769 149 9e-30 seq548 100 4e-15 seq526 95.1 2e-13 seq224 91.5 2e-12 seq658 87.8 3e-11 >seq769 Length=2557781 Score = 149 bits (164), Expect = 9e-30 Identities = 215/301 (71%), Gaps = 2/301 (1%) Strand=Plus/Minus Query 259883 ACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGC 259941 |||||| | ||||||| |||| ||| ||||| || | ||||| ||||||||||| Sbjct 972389 ACCTACAACCTCATGTCG-AGCAAGTTCTTCACGCATGCTTCCCCCACCCTCTTTAATGC 972331 Query 259942 CGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGAT 260001 ||||| || | | ||| || || ||||| ||| | |||||||||| || || Sbjct 972330 GGGCACTCCCCAGTCCCAGCTGTCCTCCTGCTTCCTGGTAGACATGAAGGATGACAGCAT 972271 Query 260002 CGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCAT 260061 || || || || ||||| |||||| || || | ||||||||| ||||||||| || Sbjct 972270 TGACGGTATTTACGACACCCTCAAGACTTGTGCCATGATCTCCAAGATGGCCGGCGGTAT 972211 Query 260062 CGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCA 260121 |||| | || ||| | || || | ||| | ||| | || |||||||||||| Sbjct 972210 CGGTCTCAACGTCCACCGCATTCGTGCTACTGGCTCGTACATTGCCGGCACCAACGGCAC 972151 Query 260122 GTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 |||||||| || || ||||||||||| || || ||| ||||||| | ||||| ||||| Sbjct 972150 ATCCAACGGTCTGGTCCCCATGCTTCGTGTCTTCAACAACACGGCTAGATACGTGGACCA 972091 Query 260182 G 260182 | Sbjct 972090 G 972090 >seq548 Length=2810912 Score = 100 bits (110), Expect = 4e-15 Identities = 179/259 (69%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869 ||||||||||| ||| |||| ||| || ||| ||| |||| ||||| Sbjct 2217779 ACCTTTTCGGCCTCGATGATCTGCATCAGCCGCTTTACGACTTGTCCGTCCGTGAGCTTG 2217720 Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929 | | ||||||||||| || ||| |||||||| |||||||| | |||| |||| Sbjct 2217719 GCGTATCGCAGGATGGCGCACCGGGACTGCAGGGGCTCGATGATTTTGTTCGACTGGTTG 2217660 Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGT-CGACCGGAGGGCCTG 332988 ||||| | || || ||||| || |||| | |||||||||| |||| | |||||||| Sbjct 2217659 CAGGCGAACGCGAATCGCGTTGTGTTGGAGTATATTTCCATGGTTCGAC-GTAGGGCCTG 2217601 Query 332989 TTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTG 333048 |||||| ||| || | || ||| || ||||| || || | | |||||| | || Sbjct 2217600 TTGGGCGCCCGAGGTCATGCTGTCTGCTTCGTCCAGAATCACCAGCTTGTGTCTTCCCGC 2217541 Query 333049 CGGCAGATCAACCCTTTTC 333067 ||| || |||| ||||| Sbjct 2217540 CGGGAGGGTAACCTTTTTC 2217522 >seq526 Length=646438 Score = 95.1 bits (104), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 725068 CGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCG 725127 ||||||||||||||||| |||| || || ||| ||| ||| |||||||||| |||||||| Sbjct 634713 CGCGCGAGATCCAGACCTCCGTCCGTCTCATCCTGCCCGGTGAACTGGCCAAGCACGCCG 634654 Query 725128 TCTCCGAGGGCACCA 725142 |||||||||| |||| Sbjct 634653 TCTCCGAGGGTACCA 634639 >seq224 Length=800728 Score = 91.5 bits (100), Expect = 2e-12 Identities = 180/261 (69%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 1456521 AGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGG 1456580 |||||||| ||| |||||| |||||| | || || | | |||| | || || | Sbjct 537958 AGATCATCACCGATGCCGTCACTATCGAGCAGGAATTCTTGACCGAGGCCCTTCCCTGCG 537899 Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 | || | ||||||||| ||||| || ||| |||||||| || || ||||| || || Sbjct 537898 CCCTGCTGGGCATGAACTCCACC-CTGATGAAGCAGTACATCGAGTTC-GTCGCTGATCG 537841 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700 |||||| || | ||| | | ||| |||| | ||||||| ||| | | Sbjct 537840 TCTGCTCATCGCCTTGGGCAATG-ACAAGGTCTACAAGGTCTCCAACCCCTTCGACTTCA 537782 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACG 1456759 ||||| ||||| |||| |||||||||||||| |||||| |||| || ||| ||| Sbjct 537781 TGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGCCGATTACC 537722 Query 1456760 CCAAGGCCGGCGTCACCGCCA 1456780 ||||| ||||||| |||| Sbjct 537721 AGAAGGCTGGCGTCATGGCCA 537701 Score = 91.5 bits (100), Expect = 2e-12 Identities = 139/193 (72%), Gaps = 10/193 (5%) Strand=Plus/Minus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAA---CAAGGAGGGCCTCGACACTTTGCCG 1456179 || |||||||||||||| || ||||||| | |||||| |||| |||||| Sbjct 538217 AAGAAGGCCGACTGGGCTATCCGGTGGATCCAGGACAAGGACT-CCTC----CTTTGCTC 538163 Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238 |||| ||||| | ||| || || || ||||| ||||| ||| ||| || | ||| Sbjct 538162 AGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGCGCCTTTGCCTCCA 538103 Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATC 1456298 |||| |||||||||||||| || || |||||||||| | ||| |||||| | ||| Sbjct 538102 TCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTC-TGACCTTCTCCAACGAGCTCATC 538044 Query 1456299 AGTCGCGACGAAG 1456311 ||| ||||||| Sbjct 538043 TCTCGTGACGAAG 538031 >seq658 Length=2797339 Score = 87.8 bits (96), Expect = 3e-11 Identities = 97/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 1878725 GGGCAGCGTCGGCCTCAACCTCGTCTGC-GCCAACTATGTGCTCCTCATGGACGCCCACT 1878783 |||| || ||||||||||||| | | || | |||| || | ||||||| |||| | Sbjct 672078 GGGCGGCCTCGGCCTCAACCT-GACGGCCGGCAACAGCGTCTACGTCATGGAGCCCCAGT 672020 Query 1878784 ATAACCCATTTGCCGAGGCACAGGCCATTGATCGCGTCCACCGCATCGGCCAGACGCGAC 1878843 | ||||| |||||||| |||||| | || |||||||||||| ||||||||||||| | Sbjct 672019 ACAACCCGGCCGCCGAGGCGCAGGCCGTCGACCGCGTCCACCGCCTCGGCCAGACGCGCC 671960 Query 1878844 CGGTGCG 1878850 | || || Sbjct 671959 CTGTCCG 671953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177672888064308