Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq769 149 9e-30
seq548 100 4e-15
seq526 95.1 2e-13
seq224 91.5 2e-12
seq658 87.8 3e-11
>seq769
Length=2557781
Score = 149 bits (164), Expect = 9e-30
Identities = 215/301 (71%), Gaps = 2/301 (1%)
Strand=Plus/Minus
Query 259883 ACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGC 259941
|||||| | ||||||| |||| ||| ||||| || | ||||| |||||||||||
Sbjct 972389 ACCTACAACCTCATGTCG-AGCAAGTTCTTCACGCATGCTTCCCCCACCCTCTTTAATGC 972331
Query 259942 CGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGAT 260001
||||| || | | ||| || || ||||| ||| | |||||||||| || ||
Sbjct 972330 GGGCACTCCCCAGTCCCAGCTGTCCTCCTGCTTCCTGGTAGACATGAAGGATGACAGCAT 972271
Query 260002 CGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCAT 260061
|| || || || ||||| |||||| || || | ||||||||| ||||||||| ||
Sbjct 972270 TGACGGTATTTACGACACCCTCAAGACTTGTGCCATGATCTCCAAGATGGCCGGCGGTAT 972211
Query 260062 CGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCA 260121
|||| | || ||| | || || | ||| | ||| | || ||||||||||||
Sbjct 972210 CGGTCTCAACGTCCACCGCATTCGTGCTACTGGCTCGTACATTGCCGGCACCAACGGCAC 972151
Query 260122 GTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181
|||||||| || || ||||||||||| || || ||| ||||||| | ||||| |||||
Sbjct 972150 ATCCAACGGTCTGGTCCCCATGCTTCGTGTCTTCAACAACACGGCTAGATACGTGGACCA 972091
Query 260182 G 260182
|
Sbjct 972090 G 972090
>seq548
Length=2810912
Score = 100 bits (110), Expect = 4e-15
Identities = 179/259 (69%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869
||||||||||| ||| |||| ||| || ||| ||| |||| |||||
Sbjct 2217779 ACCTTTTCGGCCTCGATGATCTGCATCAGCCGCTTTACGACTTGTCCGTCCGTGAGCTTG 2217720
Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929
| | ||||||||||| || ||| |||||||| |||||||| | |||| ||||
Sbjct 2217719 GCGTATCGCAGGATGGCGCACCGGGACTGCAGGGGCTCGATGATTTTGTTCGACTGGTTG 2217660
Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGT-CGACCGGAGGGCCTG 332988
||||| | || || ||||| || |||| | |||||||||| |||| | ||||||||
Sbjct 2217659 CAGGCGAACGCGAATCGCGTTGTGTTGGAGTATATTTCCATGGTTCGAC-GTAGGGCCTG 2217601
Query 332989 TTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTG 333048
|||||| ||| || | || ||| || ||||| || || | | |||||| | ||
Sbjct 2217600 TTGGGCGCCCGAGGTCATGCTGTCTGCTTCGTCCAGAATCACCAGCTTGTGTCTTCCCGC 2217541
Query 333049 CGGCAGATCAACCCTTTTC 333067
||| || |||| |||||
Sbjct 2217540 CGGGAGGGTAACCTTTTTC 2217522
>seq526
Length=646438
Score = 95.1 bits (104), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 725068 CGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCG 725127
||||||||||||||||| |||| || || ||| ||| ||| |||||||||| ||||||||
Sbjct 634713 CGCGCGAGATCCAGACCTCCGTCCGTCTCATCCTGCCCGGTGAACTGGCCAAGCACGCCG 634654
Query 725128 TCTCCGAGGGCACCA 725142
|||||||||| ||||
Sbjct 634653 TCTCCGAGGGTACCA 634639
>seq224
Length=800728
Score = 91.5 bits (100), Expect = 2e-12
Identities = 180/261 (69%), Gaps = 4/261 (2%)
Strand=Plus/Minus
Query 1456521 AGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGG 1456580
|||||||| ||| |||||| |||||| | || || | | |||| | || || |
Sbjct 537958 AGATCATCACCGATGCCGTCACTATCGAGCAGGAATTCTTGACCGAGGCCCTTCCCTGCG 537899
Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640
| || | ||||||||| ||||| || ||| |||||||| || || ||||| || ||
Sbjct 537898 CCCTGCTGGGCATGAACTCCACC-CTGATGAAGCAGTACATCGAGTTC-GTCGCTGATCG 537841
Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700
|||||| || | ||| | | ||| |||| | ||||||| ||| | |
Sbjct 537840 TCTGCTCATCGCCTTGGGCAATG-ACAAGGTCTACAAGGTCTCCAACCCCTTCGACTTCA 537782
Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACG 1456759
||||| ||||| |||| |||||||||||||| |||||| |||| || ||| |||
Sbjct 537781 TGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTTGCCGATTACC 537722
Query 1456760 CCAAGGCCGGCGTCACCGCCA 1456780
||||| ||||||| ||||
Sbjct 537721 AGAAGGCTGGCGTCATGGCCA 537701
Score = 91.5 bits (100), Expect = 2e-12
Identities = 139/193 (72%), Gaps = 10/193 (5%)
Strand=Plus/Minus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAA---CAAGGAGGGCCTCGACACTTTGCCG 1456179
|| |||||||||||||| || ||||||| | |||||| |||| ||||||
Sbjct 538217 AAGAAGGCCGACTGGGCTATCCGGTGGATCCAGGACAAGGACT-CCTC----CTTTGCTC 538163
Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238
|||| ||||| | ||| || || || ||||| ||||| ||| ||| || | |||
Sbjct 538162 AGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGCGCCTTTGCCTCCA 538103
Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATC 1456298
|||| |||||||||||||| || || |||||||||| | ||| |||||| | |||
Sbjct 538102 TCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTC-TGACCTTCTCCAACGAGCTCATC 538044
Query 1456299 AGTCGCGACGAAG 1456311
||| |||||||
Sbjct 538043 TCTCGTGACGAAG 538031
>seq658
Length=2797339
Score = 87.8 bits (96), Expect = 3e-11
Identities = 97/127 (76%), Gaps = 2/127 (2%)
Strand=Plus/Minus
Query 1878725 GGGCAGCGTCGGCCTCAACCTCGTCTGC-GCCAACTATGTGCTCCTCATGGACGCCCACT 1878783
|||| || ||||||||||||| | | || | |||| || | ||||||| |||| |
Sbjct 672078 GGGCGGCCTCGGCCTCAACCT-GACGGCCGGCAACAGCGTCTACGTCATGGAGCCCCAGT 672020
Query 1878784 ATAACCCATTTGCCGAGGCACAGGCCATTGATCGCGTCCACCGCATCGGCCAGACGCGAC 1878843
| ||||| |||||||| |||||| | || |||||||||||| ||||||||||||| |
Sbjct 672019 ACAACCCGGCCGCCGAGGCGCAGGCCGTCGACCGCGTCCACCGCCTCGGCCAGACGCGCC 671960
Query 1878844 CGGTGCG 1878850
| || ||
Sbjct 671959 CTGTCCG 671953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177672888064308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |