Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq224 145 9e-30 seq548 86.0 7e-12 >seq224 Length=800728 Score = 145 bits (160), Expect = 9e-30 Identities = 161/212 (76%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792 |||||| || |||| ||||| || || |||||||| |||| | | |||| | | | Sbjct 538233 AGTTCCTTGCATTCGTAAGAAGGCCGACTGGGCTATCCGGTGGATCCAGGACAAGGACTC 538174 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 | |||||||| |||| ||| | || || || |||||||||||||||||| ||| Sbjct 538173 CT-CCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCAGTGGCG 538115 Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 |||| | | || | |||||||||||||| ||||| ||||| ||||| |||||||| Sbjct 538114 CCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTGACCTTCTCCA 538055 Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||||||| |||||||||||||| || |||||| Sbjct 538054 ACGAGCTCATCTCTCGTGACGAAGGTCTCCAC 538023 >seq548 Length=2810912 Score = 86.0 bits (94), Expect = 7e-12 Identities = 158/231 (68%), Gaps = 12/231 (5%) Strand=Plus/Plus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762 ||||||||| || || ||||||| ||||||||| |||| ||| | | |||| | Sbjct 2055978 GGCATCAATTTCGTCGATGAAGATGATGCATGGCGCGTTTTTGCGGCCCTCGGCAAACAA 2056037 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9821 || | ||| | | | ||| ||||| ||||||||||||||||| | |||| | Sbjct 2056038 GTCTCTTACTCTCGACGGGCCAACACCGACAAACATCTCCACAAACT------CGGATCC 2056091 Query 9822 ATTG-----GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9876 | || || ||| || || || || ||||| ||||| ||| || || ||||| Sbjct 2056092 ACTGACGCTGAAGAACGGAACCCCCGACTCTCCCGCCGTGGCTTTGGCAAGCAGTGTCTT 2056151 Query 9877 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 || || || ||| || || || | ||||||||| || |||||||| || Sbjct 2056152 GCCAGTTCCGGGCGGTCCAGCAAGAATGGCACCTCGAGGGATCTTGGCTCC 2056202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583250345050160