Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1102 168 2e-36 seq769 120 9e-22 seq549 96.9 1e-14 >seq1102 Length=1535874 Score = 168 bits (186), Expect = 2e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || || || || ||||| || || || Sbjct 933396 CATACCACCACGGAGACGAAGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTC 933455 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||||||| || ||||| || || |||||||||||||| || || ||||| ||||| Sbjct 933456 GCTCAATGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGG 933515 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| ||||| ||||||||||| || | ||| ||||| || |||| || |||| || Sbjct 933516 AGGAATGCCTTCCTTATCCTGAATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTC 933575 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | |||||| ||||| || ||||| || || |||||||| Sbjct 933576 GACCTCCAGGGTGATTGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626 Score = 120 bits (132), Expect = 9e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | | ||||| ||||| || || ||||| || || || || | Sbjct 933901 TTTGCATACCACCTCGCAGGCGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGT 933960 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| || ||||| || || || ||||| ||||| ||||| | Sbjct 933961 AGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGT 934020 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| || || |||||||| || || | || ||||| || || | ||| || Sbjct 934021 CAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGC 934080 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 || || ||||| || | ||||| || || Sbjct 934081 TCTCGACCTCAAGGGTGATGGTCTTGCCCGT 934111 Score = 111 bits (122), Expect = 5e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| || || || || ||||| || || || || || || Sbjct 933624 CATACCACCACGGAGACGGAGAACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 933683 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || |||||||| || || || || ||||| ||||| ||||| ||||| Sbjct 933684 GGAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGG 933743 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | || || || || || | ||| || || Sbjct 933744 AGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAGCTCTC 933803 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727 || ||||| || | || || ||||| | || || |||| Sbjct 933804 GACCTCAAGGGTGATGGTTTTGCCGGTCAAGGTCTTGACAA 933844 >seq769 Length=2557781 Score = 120 bits (132), Expect = 9e-22 Identities = 215/314 (68%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 |||||| | ||||| || ||||| || || || ||||||| || || || || || Sbjct 1409426 GCTGTTGTCACTGTTCCCGCCTACTTCAACGACAGCCAGCGTCAGGCTACCAAGGACGCA 1409367 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || ||||| | || || || || || || || || || ||| Sbjct 1409366 GGTCTCATTGCCGGCCTGAACGTTCTCCGTATCATCAACGAGCCTACCGCCGCTGCCATT 1409307 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || || || || | | ||| || ||| | || || || ||| | ||| Sbjct 1409306 GCCTACGGCCTCGACAAGAAGGTTGAGGGTGAGCGCAATGTCCTGATCTTCGATCTCGGT 1409247 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 |||||||| || ||||| || || || || |||| ||||| || || || || || | Sbjct 1409246 GGTGGTACCTTCGATGTCTCTCTCCTTACCATTGAGGAGGGTATCTTCGAGGTCAAGTCT 1409187 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || || ||||| || || || ||||| ||||| ||||| || ||||| || || || Sbjct 1409186 ACCGCCGGTGACACTCACCTGGGTGGTGAAGACTTTGACAACCGTCTTGTCAACCACTTC 1409127 Query 349910 GTTAAAGAATTTAA 349923 ||||| || || || Sbjct 1409126 GTTAACGACTTCAA 1409113 >seq549 Length=514063 Score = 96.9 bits (106), Expect = 1e-14 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||| ||||| | | || || || || || || ||||| || || || || || || || Sbjct 328329 ACCGCCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 328388 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || || || || || || || || || ||||| ||||| ||||| || || || Sbjct 328389 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGG 328448 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || || ||||| || || | || ||||| || || | || || | || || Sbjct 328449 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCAC 328508 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || || ||||||||||| Sbjct 328509 CTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 328556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515226560041502