Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq1102 168 2e-36
seq769 120 9e-22
seq549 96.9 1e-14
>seq1102
Length=1535874
Score = 168 bits (186), Expect = 2e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || || || || || || ||||| || || ||
Sbjct 933396 CATACCACCACGGAGACGAAGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTC 933455
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|||||||| || ||||| || || |||||||||||||| || || ||||| |||||
Sbjct 933456 GCTCAATGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGG 933515
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| ||||| ||||||||||| || | ||| ||||| || |||| || |||| ||
Sbjct 933516 AGGAATGCCTTCCTTATCCTGAATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTC 933575
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || | |||||| ||||| || ||||| || || ||||||||
Sbjct 933576 GACCTCCAGGGTGATTGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626
Score = 120 bits (132), Expect = 9e-22
Identities = 153/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||||||||| || | | ||||| ||||| || || ||||| || || || || |
Sbjct 933901 TTTGCATACCACCTCGCAGGCGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGT 933960
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| || ||||| || || || ||||| ||||| ||||| |
Sbjct 933961 AGTCGGACAGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGT 934020
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
|||||||||| || || |||||||| || || | || ||||| || || | ||| ||
Sbjct 934021 CAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTCACATTGTCGATGGTATCGGAGC 934080
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
|| || ||||| || | ||||| || ||
Sbjct 934081 TCTCGACCTCAAGGGTGATGGTCTTGCCCGT 934111
Score = 111 bits (122), Expect = 5e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | ||||| || || || || ||||| || || || || || ||
Sbjct 933624 CATACCACCACGGAGACGGAGAACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 933683
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || |||||||| || || || || ||||| ||||| ||||| |||||
Sbjct 933684 GGAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGG 933743
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| || || || ||||| || || | || || || || || | ||| || ||
Sbjct 933744 AGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAGCTCTC 933803
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAA 140727
|| ||||| || | || || ||||| | || || ||||
Sbjct 933804 GACCTCAAGGGTGATGGTTTTGCCGGTCAAGGTCTTGACAA 933844
>seq769
Length=2557781
Score = 120 bits (132), Expect = 9e-22
Identities = 215/314 (68%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669
|||||| | ||||| || ||||| || || || ||||||| || || || || ||
Sbjct 1409426 GCTGTTGTCACTGTTCCCGCCTACTTCAACGACAGCCAGCGTCAGGCTACCAAGGACGCA 1409367
Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729
|| |||||| || | || ||||| | || || || || || || || || || |||
Sbjct 1409366 GGTCTCATTGCCGGCCTGAACGTTCTCCGTATCATCAACGAGCCTACCGCCGCTGCCATT 1409307
Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789
|| || || || || || | | ||| || ||| | || || || ||| | |||
Sbjct 1409306 GCCTACGGCCTCGACAAGAAGGTTGAGGGTGAGCGCAATGTCCTGATCTTCGATCTCGGT 1409247
Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849
|||||||| || ||||| || || || || |||| ||||| || || || || || |
Sbjct 1409246 GGTGGTACCTTCGATGTCTCTCTCCTTACCATTGAGGAGGGTATCTTCGAGGTCAAGTCT 1409187
Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909
|| || ||||| || || || ||||| ||||| ||||| || ||||| || || ||
Sbjct 1409186 ACCGCCGGTGACACTCACCTGGGTGGTGAAGACTTTGACAACCGTCTTGTCAACCACTTC 1409127
Query 349910 GTTAAAGAATTTAA 349923
||||| || || ||
Sbjct 1409126 GTTAACGACTTCAA 1409113
>seq549
Length=514063
Score = 96.9 bits (106), Expect = 1e-14
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||| ||||| | | || || || || || || ||||| || || || || || || ||
Sbjct 328329 ACCGCCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 328388
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || || || || || || || || || ||||| ||||| ||||| || || ||
Sbjct 328389 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGG 328448
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|| || || || ||||| || || | || ||||| || || | || || | || ||
Sbjct 328449 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCAC 328508
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | ||||| || || || || || || |||||||||||
Sbjct 328509 CTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 328556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515226560041502
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |