Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq549 96.9 2e-15
seq1102 95.1 8e-15
>seq549
Length=514063
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | ||||||| ||||| || || ||| |||||| || ||||| || || ||
Sbjct 328330 CCGCCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 328389
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| || || || || ||||| || || | |||||| ||||| |||||
Sbjct 328390 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 328449
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||||| | || || | || ||||| ||||||
Sbjct 328450 ATGCCCTCCTTGTCCTGGATCTTG-GACTTGACATTGTCGATGGTGTCCGAAGACTCCAC 328508
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
|| | ||| || || || || || | || || || ||||||||||| |||
Sbjct 328509 CTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 328560
>seq1102
Length=1535874
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
|| || ||| |||||| || ||||| || || ||||| || || |||||||||| ||
Sbjct 933652 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCAAGCTGC 933711
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| ||||| || || | |||||| ||||| || || | ||||||||||| |||| ||
Sbjct 933712 TTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATC-TT 933770
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || ||| | || || || |||||| || || | ||| || ||||| |||||
Sbjct 933771 CGACTTGACGTTGTCGATGGTATCGGAGCTCTCGACCTCAAGGGTGATGGTTTTGCCGGT 933830
Query 34683 TAACGTTTTCACAA 34696
|| || || ||||
Sbjct 933831 CAAGGTCTTGACAA 933844
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | |||||| | || | ||||||||||||||||| || |||||||| ||
Sbjct 933172 CCGCCACGAAGACGGAGAACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCTC 933231
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || ||| | || || | || || || ||||| || || ||||| ||||| || ||
Sbjct 933232 AGAGTGCGCCCATCCTCCAACTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGA 933291
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCA 34657
| ||||||||||| ||| || | || ||| | || ||||| ||| ||| |
Sbjct 933292 ATACCCTCCTTGTC-CTGAATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCG-ACTCAA 933349
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || || ||||| || || | || || ||||| ||||||||
Sbjct 933350 CCTCAAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 933398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314724099510122
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |