Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1102 170 4e-37 seq549 159 8e-34 seq658 138 3e-27 >seq1102 Length=1535874 Score = 170 bits (188), Expect = 4e-37 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| || || | |||||| | || ||| Sbjct 933643 AGAACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCT 933702 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||||||||||| || ||||||||| Sbjct 933703 TCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 933762 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||| || ||||| || ||||| || ||||| || Sbjct 933763 TGGATCTTCGACTTGACGTTGTCGATGGTATCGGAGCTCTCGACCTCAAGGGTGATGGTT 933822 Query 211083 TTTCCCGTGAGAGTCTTTACAA 211104 || || || | ||||| |||| Sbjct 933823 TTGCCGGTCAAGGTCTTGACAA 933844 Score = 154 bits (170), Expect = 3e-32 Identities = 170/225 (76%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || ||||| |||||| ||| || ||||||||||| || || || Sbjct 933177 ACGAAGACGGAGAACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGT 933236 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||| ||||||||| || ||||| | ||| || |||||||| |||| || Sbjct 933237 GCGCCCATCCTCCAACTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGAATACC 933296 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTC 211069 ||||||||||| ||||| || ||||| ||||||||||| ||| |||||||| Sbjct 933297 CTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTC---GCTCGACTCAACCTC 933353 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| || || || || || ||||| ||||| | |||||| Sbjct 933354 AAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 933398 Score = 154 bits (170), Expect = 3e-32 Identities = 147/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || |||||||| || |||||||| || || | ||||| | ||||| Sbjct 933924 AGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCC 933983 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| || || || ||||||||||||| || ||||| ||| Sbjct 933984 TCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 934043 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || |||||||| || ||||| || ||||| || ||||| ||| Sbjct 934044 TGGATCTTCGACTTCACATTGTCGATGGTATCGGAGCTCTCGACCTCAAGGGTGATGGTC 934103 Query 211083 TTTCCCGT 211090 || ||||| Sbjct 934104 TTGCCCGT 934111 Score = 143 bits (158), Expect = 6e-29 Identities = 161/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 || || ||||| || ||||| || || || ||||| || || | ||| | || || || Sbjct 933415 AGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTCAATGTTCGG-CCGTC 933473 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 ||| |||||||| || || ||||||||||| || ||||||||||||| |||||||| || Sbjct 933474 TTCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC 933533 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||| ||||| ||| || || ||||| ||||| || || ||||| || ||||| || Sbjct 933534 CTGAATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGACCTCCAGGGTGATTGT 933593 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || ||||| || || || || | |||||| Sbjct 933594 CTTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626 >seq549 Length=514063 Score = 159 bits (176), Expect = 8e-34 Identities = 174/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || |||||||| || |||||||| || || | ||||| | || || Sbjct 328345 AGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 328404 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || || | || ||||||||| Sbjct 328405 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 328464 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||||||||| || || ||||| || ||||| ||| Sbjct 328465 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTC 328524 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATGGTTACTTGATGC 211132 || |||||||| ||||| || || | |||||| | || |||||| ||| Sbjct 328525 TTGCCCGTGAGGGTCTTGACGAAAATCTGCATCT--TGCCTACTTGGTGC 328572 >seq658 Length=2797339 Score = 138 bits (152), Expect = 3e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | || || || ||||||||||| || ||||| Sbjct 1468259 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATC 1468318 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || |||||||| || | || ||||||||||||||||| || || || ||| Sbjct 1468319 AGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1468378 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| || || |||||||| ||||| ||||| |||||||| ||||| || || Sbjct 1468379 ATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 1468437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159130702755410