Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq549 107 1e-18
>seq549
Length=514063
Score = 107 bits (118), Expect = 1e-18
Identities = 146/201 (73%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| || ||||||||||| || || ||||| || || || || ||
Sbjct 328559 AAGATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCT 328500
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
||||||| | || ||| | || | || || ||||| || || | ||||| ||
Sbjct 328499 TCGGACACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGCATCCCGCCCGA 328441
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| |||||| | || || |||||||| || || || |||| ||||| | ||| ||
Sbjct 328440 CCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTA 328381
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||||||
Sbjct 328380 CAACATCCAGAAGGAGTCCAC 328360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338003692648472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |