Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq549 140 8e-28
seq1102 131 4e-25
seq1369 129 1e-24
seq658 116 9e-21
seq1424 105 2e-17
>seq549
Length=514063
Score = 140 bits (154), Expect = 8e-28
Identities = 166/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || ||||| || ||||| || || |||| ||||| |||| | ||
Sbjct 328335 ACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 328394
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || |||||||| || || || ||||||||||| || ||
Sbjct 328395 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCC 328454
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||||||||| || | ||||| || |
Sbjct 328455 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAG 328514
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| ||||||||||| | || || | ||| | ||||| ||
Sbjct 328515 GGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 328559
>seq1102
Length=1535874
Score = 131 bits (144), Expect = 4e-25
Identities = 143/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || || ||||| ||||| || || |||| ||||| |||| || || | |||||
Sbjct 933924 AGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCC 933983
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct 933984 TCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 934043
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| |||||||| || ||| | || || || | ||||| |||
Sbjct 934044 TGGATCTTCGACTTCACATTGTCGATGGTATCGGAGCTCTCGACCTCAAGGGTGATGGTC 934103
Query 225682 TTGCCCGTCA 225691
||||||||||
Sbjct 934104 TTGCCCGTCA 934113
Score = 104 bits (114), Expect = 6e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || |||||||||||| || || |||| || || ||| || |||
Sbjct 933177 ACGAAGACGGAGAACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGT 933236
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||| || | |||||| || || ||||| | || || ||||| || ||||||||
Sbjct 933237 GCGCCCATCCTCCAACTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGAATACC 933296
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| || ||||| ||| || ||||||||||| | || || || |
Sbjct 933297 CTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCAACCTCAAG 933356
Query 225672 CGTGATCGTCTTGCCCGTCA 225691
||||| || ||||| ||||
Sbjct 933357 AGTGATGGTTTTGCCAGTCA 933376
>seq1369
Length=37551
Score = 129 bits (142), Expect = 1e-24
Identities = 204/289 (71%), Gaps = 5/289 (2%)
Strand=Plus/Plus
Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499
||| |||||||||||||||||| ||||| ||| | ||||||| ||||| | |
Sbjct 24044 AACTTTATATTTAATATTTGGTCTTTTTTCAGGTTTATTAGGTACAGCTTTTTCAGTTTT 24103
Query 7500 TATAAGGTTAGAA-TTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTT 7558
|| || ||||| |||| || || ||| |||| | | || ||| ||||| |
Sbjct 24104 AATTAGACTAGAACTTAG-TGGACCAGGTGTTCAATTTATAGCTGACAAT---CAACTAT 24159
Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618
| || |||||| || || ||||| | | ||||| || ||| | |||||||| |
Sbjct 24160 ATAATAGTATTATAACAGCTCATGCTATATTAATGATATTTTTTATGGTTATGCCTGCAT 24219
Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678
| ||||| ||||| || |||| || | || |||||| | |||| |||||||||||| |
Sbjct 24220 TAATAGGAGGTTTTGGTAATTTTTTATTACCATTAATGGTAGGTGGTCCTGATATGGCAT 24279
Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727
| || || | |||||||| ||||| |||||| |||| ||| |||||
Sbjct 24280 TCCCTAGATTAAACAATATTAGTTTCTGATTATTACCACCTAGTTTATT 24328
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||| ||||| ||||||||||| | |||||| | | ||||| || ||||| ||||
Sbjct 24725 TTCAGGGTGACCGAAAAATCAGAAAAGATGTTGGAATAATATAGGGTCTCCTCCACCTGC 24666
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772
| ||||| || |||||||||||||||||| |||||||
Sbjct 24665 TACTTCAAAGAATGAAGTATTAAAATTTCTATCTGTTAAAA 24625
>seq658
Length=2797339
Score = 116 bits (128), Expect = 9e-21
Identities = 124/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| || |||| || || || |||||||| ||||| |||||
Sbjct 1468259 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATC 1468318
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || || || || |||||||| |||||||| ||| ||| |||
Sbjct 1468319 AGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1468378
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|||||||| || | ||||| || | ||||| |||||||||||
Sbjct 1468379 ATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGT 1468422
>seq1424
Length=35696
Score = 105 bits (116), Expect = 2e-17
Identities = 129/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611
||||| || || |||||| || || ||||| | | ||||| || ||| | ||||||
Sbjct 20698 CAACTATATAATAGTATTATAACAGCTCATGCTATATTAATGATATTTTTTATGGTTATG 20757
Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671
|| | | ||||| ||||| || |||| || | || |||||| | |||| |||||||
Sbjct 20758 CCTGCATTAATAGGAGGTTTTGGTAATTTTTTATTACCATTAATGGTAGGTGGTCCTGAT 20817
Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727
||||| || || || | |||||||| ||||| |||||| |||| ||| |||||
Sbjct 20818 ATGGCATTCCCTAGATTAAACAATATTAGTTTCTGATTATTACCACCTAGTTTATT 20873
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||| ||||| ||||||||||| | |||||| | | ||||| || ||||| ||||
Sbjct 29892 TTCAGGGTGACCGAAAAATCAGAAAAGATGTTGGAATAATATAGGGTCTCCTCCACCTGC 29833
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772
| ||||| || |||||||||||||||||| |||||||
Sbjct 29832 TACTTCAAAGAATGAAGTATTAAAATTTCTATCTGTTAAAA 29792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192509289475196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |