Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq549 140 8e-28 seq1102 131 4e-25 seq1369 129 1e-24 seq658 116 9e-21 seq1424 105 2e-17 >seq549 Length=514063 Score = 140 bits (154), Expect = 8e-28 Identities = 166/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || ||||| || || |||| ||||| |||| | || Sbjct 328335 ACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 328394 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| || || || ||||||||||| || || Sbjct 328395 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCC 328454 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||||||||| || | ||||| || | Sbjct 328455 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCAAG 328514 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||||||||| | || || | ||| | ||||| || Sbjct 328515 GGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 328559 >seq1102 Length=1535874 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || ||||| ||||| || || |||| ||||| |||| || || | ||||| Sbjct 933924 AGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCC 933983 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || |||||||| || || || ||||| || ||||| || ||||| || Sbjct 933984 TCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 934043 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| |||||||| || ||| | || || || | ||||| ||| Sbjct 934044 TGGATCTTCGACTTCACATTGTCGATGGTATCGGAGCTCTCGACCTCAAGGGTGATGGTC 934103 Query 225682 TTGCCCGTCA 225691 |||||||||| Sbjct 934104 TTGCCCGTCA 934113 Score = 104 bits (114), Expect = 6e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || |||||||||||| || || |||| || || ||| || ||| Sbjct 933177 ACGAAGACGGAGAACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCTCAGAGT 933236 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||| || | |||||| || || ||||| | || || ||||| || |||||||| Sbjct 933237 GCGCCCATCCTCCAACTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGAATACC 933296 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| || ||||||||||| | || || || | Sbjct 933297 CTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCAACCTCAAG 933356 Query 225672 CGTGATCGTCTTGCCCGTCA 225691 ||||| || ||||| |||| Sbjct 933357 AGTGATGGTTTTGCCAGTCA 933376 >seq1369 Length=37551 Score = 129 bits (142), Expect = 1e-24 Identities = 204/289 (71%), Gaps = 5/289 (2%) Strand=Plus/Plus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 ||| |||||||||||||||||| ||||| ||| | ||||||| ||||| | | Sbjct 24044 AACTTTATATTTAATATTTGGTCTTTTTTCAGGTTTATTAGGTACAGCTTTTTCAGTTTT 24103 Query 7500 TATAAGGTTAGAA-TTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTT 7558 || || ||||| |||| || || ||| |||| | | || ||| ||||| | Sbjct 24104 AATTAGACTAGAACTTAG-TGGACCAGGTGTTCAATTTATAGCTGACAAT---CAACTAT 24159 Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618 | || |||||| || || ||||| | | ||||| || ||| | |||||||| | Sbjct 24160 ATAATAGTATTATAACAGCTCATGCTATATTAATGATATTTTTTATGGTTATGCCTGCAT 24219 Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678 | ||||| ||||| || |||| || | || |||||| | |||| |||||||||||| | Sbjct 24220 TAATAGGAGGTTTTGGTAATTTTTTATTACCATTAATGGTAGGTGGTCCTGATATGGCAT 24279 Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727 | || || | |||||||| ||||| |||||| |||| ||| ||||| Sbjct 24280 TCCCTAGATTAAACAATATTAGTTTCTGATTATTACCACCTAGTTTATT 24328 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| ||||| ||||||||||| | |||||| | | ||||| || ||||| |||| Sbjct 24725 TTCAGGGTGACCGAAAAATCAGAAAAGATGTTGGAATAATATAGGGTCTCCTCCACCTGC 24666 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 | ||||| || |||||||||||||||||| ||||||| Sbjct 24665 TACTTCAAAGAATGAAGTATTAAAATTTCTATCTGTTAAAA 24625 >seq658 Length=2797339 Score = 116 bits (128), Expect = 9e-21 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| || |||| || || || |||||||| ||||| ||||| Sbjct 1468259 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATC 1468318 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || || || || |||||||| |||||||| ||| ||| ||| Sbjct 1468319 AGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1468378 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| || | ||||| || | ||||| ||||||||||| Sbjct 1468379 ATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGT 1468422 >seq1424 Length=35696 Score = 105 bits (116), Expect = 2e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||||| || || |||||| || || ||||| | | ||||| || ||| | |||||| Sbjct 20698 CAACTATATAATAGTATTATAACAGCTCATGCTATATTAATGATATTTTTTATGGTTATG 20757 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || | | ||||| ||||| || |||| || | || |||||| | |||| ||||||| Sbjct 20758 CCTGCATTAATAGGAGGTTTTGGTAATTTTTTATTACCATTAATGGTAGGTGGTCCTGAT 20817 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727 ||||| || || || | |||||||| ||||| |||||| |||| ||| ||||| Sbjct 20818 ATGGCATTCCCTAGATTAAACAATATTAGTTTCTGATTATTACCACCTAGTTTATT 20873 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| ||||| ||||||||||| | |||||| | | ||||| || ||||| |||| Sbjct 29892 TTCAGGGTGACCGAAAAATCAGAAAAGATGTTGGAATAATATAGGGTCTCCTCCACCTGC 29833 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 | ||||| || |||||||||||||||||| ||||||| Sbjct 29832 TACTTCAAAGAATGAAGTATTAAAATTTCTATCTGTTAAAA 29792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192509289475196