Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1102 150 4e-31 seq549 150 4e-31 seq658 136 1e-26 >seq1102 Length=1535874 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| ||||| || || || |||||||| ||||| || |||||| Sbjct 933623 CAGATCTTCGTCAAAACGCTCACCGGCAAGACAATCACCCTGGAGGTCGAGTCATCAGAC 933564 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || |||||| ||||||||||| || ||||| || ||||| |||||||| Sbjct 933563 ACGATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAG 933504 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || ||||| ||||||||||| || | || | ||| || ||| | Sbjct 933503 CGCCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACATTGAGCGACTACAACATT 933444 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || ||||| || || Sbjct 933443 CAGAAGGAATCCACCCTGCACCTGGT 933418 Score = 150 bits (166), Expect = 4e-31 Identities = 145/186 (78%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || ||||| |||||||| ||||| || ||||| || |||||||| |||||||| Sbjct 933830 ACCGGCAAAACCATCACCCTTGAGGTCGAGAGCTCCGATACCATCGACAACGTCAAGTCG 933771 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || || || ||||| |||||||| || || ||||||||||| || Sbjct 933770 AAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAG 933711 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| ||||| || | || ||| |||| || ||| |||| || || || || ||||| Sbjct 933710 CAGCTTGAAGACGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTGCAC 933651 Query 178125 CTTGTT 178130 || ||| Sbjct 933650 CTCGTT 933645 Score = 129 bits (142), Expect = 1e-24 Identities = 140/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || |||||||| ||||| || ||||| || |||||||| || || || Sbjct 934111 ACGGGCAAGACCATCACCCTTGAGGTCGAGAGCTCCGATACCATCGACAATGTGAAGTCG 934052 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| ||||| || || || || ||||| |||||||| || || ||||||||||| || Sbjct 934051 AAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAG 933992 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || ||||| ||||| | || || |||| || ||| |||| || || || || || ||| Sbjct 933991 CAACTCGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAT 933932 Query 178125 CTTGTT 178130 || ||| Sbjct 933931 CTCGTT 933926 Score = 107 bits (118), Expect = 5e-18 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || || || || || || || || ||||| ||||| || ||||| || ||| Sbjct 933395 CAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTTGAGGTTGAGTCGAGC--- 933339 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| |||||||| |||||||||||||| || || || || || |||||| Sbjct 933338 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACCAG 933279 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || | ||||| || || || ||| | || ||||| | ||||| ||| |||||| Sbjct 933278 CAGCGCTTGATCTTTGCGGGCAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTATAAC 933219 Query 178101 GTCCAAAAAGA 178111 |||| || || Sbjct 933218 ATCCAGAAGGA 933208 >seq549 Length=514063 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || |||||||| |||||||| || ||| Sbjct 328553 CAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCGGAC 328494 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || ||||| || |||||||| Sbjct 328493 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAG 328434 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || |||| || ||| || Sbjct 328433 CGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATC 328374 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| || || Sbjct 328373 CAGAAGGAGTCCACCCTGCACCTGGT 328348 >seq658 Length=2797339 Score = 136 bits (150), Expect = 1e-26 Identities = 138/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || ||||| || || || ||||||||||||||||| || |||||||| Sbjct 1468438 TTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCAT 1468379 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || ||||| || |||||||| || || Sbjct 1468378 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCT 1468319 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || || |||||||| || || | || || |||| || ||| |||| || Sbjct 1468318 GATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACCCTGTCCGACTACAACATCCAGAA 1468259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203709083696196