Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1102 150 4e-31
seq549 150 4e-31
seq658 136 1e-26
>seq1102
Length=1535874
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| ||||| ||||| || || || |||||||| ||||| || ||||||
Sbjct 933623 CAGATCTTCGTCAAAACGCTCACCGGCAAGACAATCACCCTGGAGGTCGAGTCATCAGAC 933564
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || |||||| ||||||||||| || ||||| || ||||| ||||||||
Sbjct 933563 ACGATCGACAATGTCAAATCGAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAG 933504
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| || ||||| ||||||||||| || | || | ||| || ||| |
Sbjct 933503 CGCCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCCGAACATTGAGCGACTACAACATT 933444
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || ||||| || ||
Sbjct 933443 CAGAAGGAATCCACCCTGCACCTGGT 933418
Score = 150 bits (166), Expect = 4e-31
Identities = 145/186 (78%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || ||||| |||||||| ||||| || ||||| || |||||||| ||||||||
Sbjct 933830 ACCGGCAAAACCATCACCCTTGAGGTCGAGAGCTCCGATACCATCGACAACGTCAAGTCG 933771
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||| |||||||| || || || ||||| |||||||| || || ||||||||||| ||
Sbjct 933770 AAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAG 933711
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||||| ||||| || | || ||| |||| || ||| |||| || || || || |||||
Sbjct 933710 CAGCTTGAAGACGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCCACCCTGCAC 933651
Query 178125 CTTGTT 178130
|| |||
Sbjct 933650 CTCGTT 933645
Score = 129 bits (142), Expect = 1e-24
Identities = 140/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| || || || |||||||| ||||| || ||||| || |||||||| || || ||
Sbjct 934111 ACGGGCAAGACCATCACCCTTGAGGTCGAGAGCTCCGATACCATCGACAATGTGAAGTCG 934052
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||| ||||| || || || || ||||| |||||||| || || ||||||||||| ||
Sbjct 934051 AAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTGATCTTCGCCGGCAAG 933992
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
|| ||||| ||||| | || || |||| || ||| |||| || || || || || |||
Sbjct 933991 CAACTCGAGGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAT 933932
Query 178125 CTTGTT 178130
|| |||
Sbjct 933931 CTCGTT 933926
Score = 107 bits (118), Expect = 5e-18
Identities = 139/191 (73%), Gaps = 6/191 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| || || || || || || || || ||||| ||||| || ||||| || |||
Sbjct 933395 CAGATCTTTGTCAAGACCCTGACTGGCAAAACCATCACTCTTGAGGTTGAGTCGAGC--- 933339
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||||||||| |||||||| |||||||||||||| || || || || || ||||||
Sbjct 933338 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCCCCTGACCAG 933279
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| || | ||||| || || || ||| | || ||||| | ||||| ||| ||||||
Sbjct 933278 CAGCGCTTGATCTTTGCGGGCAAGCAGTTGGAGGATGGGCGCACTCTGAGCGACTATAAC 933219
Query 178101 GTCCAAAAAGA 178111
|||| || ||
Sbjct 933218 ATCCAGAAGGA 933208
>seq549
Length=514063
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| || || || |||||||| |||||||| || |||
Sbjct 328553 CAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCGGAC 328494
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || ||||| || ||||||||
Sbjct 328493 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAG 328434
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| || || | || || |||| || ||| ||
Sbjct 328433 CGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATC 328374
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| || ||
Sbjct 328373 CAGAAGGAGTCCACCCTGCACCTGGT 328348
>seq658
Length=2797339
Score = 136 bits (150), Expect = 1e-26
Identities = 138/180 (77%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||||||||| || ||||| || || || ||||||||||||||||| || ||||||||
Sbjct 1468438 TTTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCGTCCGACACCAT 1468379
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
||| || ||||| ||||| |||||||| || || ||||| || |||||||| || ||
Sbjct 1468378 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCT 1468319
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||| || || || |||||||| || || | || || |||| || ||| |||| ||
Sbjct 1468318 GATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGAACCCTGTCCGACTACAACATCCAGAA 1468259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203709083696196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |