Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06- 08] 1,434 sequences; 41,009,036 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq549 179 3e-40 seq1102 156 4e-33 seq658 132 4e-26 seq1 89.7 5e-13 >seq549 Length=514063 Score = 179 bits (198), Expect = 3e-40 Identities = 180/232 (78%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | |||||| ||||| ||| ||||||||| ||||| ||||||||| Sbjct 328330 CCGCCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 328389 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| ||||| ||||| ||||| | || Sbjct 328390 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 328449 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | ||||| ||||||| Sbjct 328450 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCCGAAGACTCCA 328507 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | || || || || ||||| || ||||| |||||||||||||| || Sbjct 328508 CCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 328559 >seq1102 Length=1535874 Score = 156 bits (172), Expect = 4e-33 Identities = 175/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || |||||||||||||| |||||||||||| Sbjct 933172 CCGCCACGAAGACGGAGAACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCTC 933231 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| | || || | ||||||||| || || |||| |||||| ||||| | |||| Sbjct 933232 AGAGTGCGCCCATCCTCCAACTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGA 933291 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| | ||||| | ||| | | | |||||||||||||| | Sbjct 933292 ATACCCTCCTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCAA 933349 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || ||||| || ||||| ||||| || || |||||||| Sbjct 933350 CCTCAAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 933398 Score = 127 bits (140), Expect = 2e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || ||||| ||| ||||||||| ||||| |||||||| Sbjct 933628 CCACCACGGAGACGGAGAACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 933687 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || ||||||||||||||||| ||||| ||||| ||||| | ||| Sbjct 933688 AGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 933747 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 933748 ATGCCCTCCTTGTCCTGGATCTT 933770 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| ||||| ||| |||||||||||||| |||||| Sbjct 933400 CCACCACGGAGACGAAGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTC 933459 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || |||| ||||||||||| || || || || |||||||| ||||| | ||| Sbjct 933460 AATGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGA 933519 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||| ||| ||| | || | || || | | | ||||| ||||| || Sbjct 933520 ATGCCTTCCTTATCC-TGAATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGAC 933578 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || ||||| || ||||| |||||||| Sbjct 933579 CTCCAGGGTGATTGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626 Score = 111 bits (122), Expect = 1e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || ||| ||||||||| ||||| |||||||| Sbjct 933909 CCACCTCGCAGGCGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 933968 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || ||||| |||||||||||||| ||||| ||||| ||||| | ||| Sbjct 933969 AGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 934028 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA 41786 | || |||||| ||| ||| || ||||| Sbjct 934029 ATGCCCTCCTTATCCTGGATCTTCGACTTCA 934059 >seq658 Length=2797339 Score = 132 bits (146), Expect = 4e-26 Identities = 141/184 (77%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||||| ||||| || |||| |||||||||||||| || || | Sbjct 1468257 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGA 1468316 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 |||||||||| ||||| | ||| | || |||||||||| ||| || ||| || | Sbjct 1468317 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1468376 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | |||||| |||||||||||| | || || || || ||||| || ||||| || Sbjct 1468377 CG--ATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCAC 1468434 Query 41851 GAAA 41854 |||| Sbjct 1468435 GAAA 1468438 >seq1 Length=4954631 Score = 89.7 bits (98), Expect = 5e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 85799 TCGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGT 85858 ||| || || || || || ||||| || ||||||| |||||| |||||||||||| Sbjct 771670 TCGCATTGCCCCACGGTCGGGCCTTGCTTCCAAGCACTTCATCGACACGGGCGCCGGGGT 771611 Query 85859 CATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912 ||||||||||||||||||||| | |||| | | || |||||||||| ||| Sbjct 771610 CATCGACGCCGACTACCGCGGCCAGGTCAAGGTGCTGCTTTTCAACCACGCCGA 771557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462295713200800