Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stachybotrys_20chartarum_20[genbank_20GCA_5F001021365.1_202015-06-
08] 1,434 sequences; 41,009,036 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq549 179 3e-40
seq1102 156 4e-33
seq658 132 4e-26
seq1 89.7 5e-13
>seq549
Length=514063
Score = 179 bits (198), Expect = 3e-40
Identities = 180/232 (78%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || ||||| | |||||| ||||| ||| ||||||||| ||||| |||||||||
Sbjct 328330 CCGCCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 328389
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| |||||||||||||||||||| ||||| ||||| ||||| | ||
Sbjct 328390 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGG 328449
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| || ||| || | || | ||||| |||||||
Sbjct 328450 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCCGAAGACTCCA 328507
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| | || || || || ||||| || ||||| |||||||||||||| ||
Sbjct 328508 CCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 328559
>seq1102
Length=1535874
Score = 156 bits (172), Expect = 4e-33
Identities = 175/229 (76%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || ||||| | || || || || |||||||||||||| ||||||||||||
Sbjct 933172 CCGCCACGAAGACGGAGAACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGCTC 933231
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| |||||| | || || | ||||||||| || || |||| |||||| ||||| | ||||
Sbjct 933232 AGAGTGCGCCCATCCTCCAACTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGGGGA 933291
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||||||| ||| | ||||| | ||| | | | |||||||||||||| |
Sbjct 933292 ATACCCTCCTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCAA 933349
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || ||||| || ||||| ||||| || || ||||||||
Sbjct 933350 CCTCAAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 933398
Score = 127 bits (140), Expect = 2e-24
Identities = 114/143 (80%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || ||||| ||| ||||||||| ||||| ||||||||
Sbjct 933628 CCACCACGGAGACGGAGAACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 933687
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || ||||||||||||||||| ||||| ||||| ||||| | |||
Sbjct 933688 AGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 933747
Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778
| || |||||||||| ||| ||
Sbjct 933748 ATGCCCTCCTTGTCCTGGATCTT 933770
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||||| ||||| ||| |||||||||||||| ||||||
Sbjct 933400 CCACCACGGAGACGAAGCACCAGGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGCTC 933459
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || || |||| ||||||||||| || || || || |||||||| ||||| | |||
Sbjct 933460 AATGTTCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGGTCAGGAGGA 933519
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||| ||| ||| | || | || || | | | ||||| ||||| ||
Sbjct 933520 ATGCCTTCCTTATCC-TGAATCTTCGATTTGACATTGTCGATCGTGTCTGATGACTCGAC 933578
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || || || || || ||||| || ||||| ||||||||
Sbjct 933579 CTCCAGGGTGATTGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCAT 933626
Score = 111 bits (122), Expect = 1e-19
Identities = 115/151 (76%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || ||||| || ||| ||||||||| ||||| ||||||||
Sbjct 933909 CCACCTCGCAGGCGAAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 933968
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || | || ||||| |||||||||||||| ||||| ||||| ||||| | |||
Sbjct 933969 AGGGTACGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGAGGA 934028
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA 41786
| || |||||| ||| ||| || |||||
Sbjct 934029 ATGCCCTCCTTATCCTGGATCTTCGACTTCA 934059
>seq658
Length=2797339
Score = 132 bits (146), Expect = 4e-26
Identities = 141/184 (77%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||||| ||||| || |||| |||||||||||||| || || |
Sbjct 1468257 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGA 1468316
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
|||||||||| ||||| | ||| | || |||||||||| ||| || ||| || |
Sbjct 1468317 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1468376
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | |||||| |||||||||||| | || || || || ||||| || ||||| ||
Sbjct 1468377 CG--ATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCAC 1468434
Query 41851 GAAA 41854
||||
Sbjct 1468435 GAAA 1468438
>seq1
Length=4954631
Score = 89.7 bits (98), Expect = 5e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 85799 TCGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGT 85858
||| || || || || || ||||| || ||||||| |||||| ||||||||||||
Sbjct 771670 TCGCATTGCCCCACGGTCGGGCCTTGCTTCCAAGCACTTCATCGACACGGGCGCCGGGGT 771611
Query 85859 CATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912
||||||||||||||||||||| | |||| | | || |||||||||| |||
Sbjct 771610 CATCGACGCCGACTACCGCGGCCAGGTCAAGGTGCTGCTTTTCAACCACGCCGA 771557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462295713200800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |