Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq403 129 1e-24 >seq403 Length=285126 Score = 129 bits (142), Expect = 1e-24 Identities = 182/253 (72%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || ||||| || || | || |||||||| | | ||||| |||| || ||| Sbjct 107637 ATCATCACCGAAGCTGTCGAGATTGAGCAGGAGTTCCTCAGCGACGCGCTTCCTTG-CGC 107579 Query 230446 -CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 ||| | ||||||||||| || ||| | |||||||| || ||||| |||||||| | Sbjct 107578 TCTTCTCGGCATGAACGCCACTCTCATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCT 107519 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | |||| || || || || |||||| | | |||||||| | || ||||| Sbjct 107518 GCTCCTTGCTCTCGGCAACCCCAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGA 107459 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | ||| |||||| || ||||||||||||||||| |||||||| ||||||| || | Sbjct 107458 GAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAAAA 107399 Query 230625 GCCTGGTGTGATG 230637 | | ||||| ||| Sbjct 107398 GGCCGGTGTCATG 107386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057818388904820