Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq403 87.8 2e-12 >seq403 Length=285126 Score = 87.8 bits (96), Expect = 2e-12 Identities = 195/291 (67%), Gaps = 5/291 (2%) Strand=Plus/Plus Query 17228 TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCT 17287 ||| | || || || ||||| || || ||| | || ||||| | ||||||||| Sbjct 108002 TCGCTGATGTATGTGTCGATAAGGAGAGAGTAAGTCTCAGAGTGGACGTTCTCCATCATG 108061 Query 17288 ATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347 ||||| || ||||| ||||| || || || | ||||| ||||| | |||| ||||| Sbjct 108062 ATCTGGAAACCGTAGAAGCAGCGCGCCTCGGGAATTTGTACTTCGCTGGAGAAGCGTTCG 108121 Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATG 17407 | | || ||||| || ||||| || ||||||||||| || | | ||| ||| Sbjct 108122 ACCAAGTTCTCGTTGACAATGCCATCCGAGGCGGCGAAAAAGGCAAGGACATGGGAGATG 108181 Query 17408 AAATATTTTTCGTCCGGTGTAAGAACGC----GCCAGTCCTTTAAATCTTTGGATATATC 17463 ||| | |||| || || | ||| |||||| | | || ||||| | ||| Sbjct 108182 AAAAAGCGCTCGT-CGTCGTTCAATCGCTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATC 108240 Query 17464 CACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCA 17514 | || |||| |||||| ||| |||| | ||||| || ||||| | ||| Sbjct 108241 AATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCA 108291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542921701520