Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq403 87.8 2e-12
>seq403
Length=285126
Score = 87.8 bits (96), Expect = 2e-12
Identities = 195/291 (67%), Gaps = 5/291 (2%)
Strand=Plus/Plus
Query 17228 TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCT 17287
||| | || || || ||||| || || ||| | || ||||| | |||||||||
Sbjct 108002 TCGCTGATGTATGTGTCGATAAGGAGAGAGTAAGTCTCAGAGTGGACGTTCTCCATCATG 108061
Query 17288 ATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347
||||| || ||||| ||||| || || || | ||||| ||||| | |||| |||||
Sbjct 108062 ATCTGGAAACCGTAGAAGCAGCGCGCCTCGGGAATTTGTACTTCGCTGGAGAAGCGTTCG 108121
Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATG 17407
| | || ||||| || ||||| || ||||||||||| || | | ||| |||
Sbjct 108122 ACCAAGTTCTCGTTGACAATGCCATCCGAGGCGGCGAAAAAGGCAAGGACATGGGAGATG 108181
Query 17408 AAATATTTTTCGTCCGGTGTAAGAACGC----GCCAGTCCTTTAAATCTTTGGATATATC 17463
||| | |||| || || | ||| |||||| | | || ||||| | |||
Sbjct 108182 AAAAAGCGCTCGT-CGTCGTTCAATCGCTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATC 108240
Query 17464 CACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCA 17514
| || |||| |||||| ||| |||| | ||||| || ||||| | |||
Sbjct 108241 AATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCA 108291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517542921701520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |