Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq171 104 3e-17 >seq171 Length=1567143 Score = 104 bits (114), Expect = 3e-17 Identities = 190/274 (69%), Gaps = 6/274 (2%) Strand=Plus/Minus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCAC--GTACGCGGCCCCGA 146053 ||||| || |||||||| ||| |||||||| | | | || |||| | || |||| Sbjct 618397 AGCTGATCGACGCCCTGGCCCTCGTAATCTGCC--GCATGCCCTTTGTACTCTGCGCCGA 618340 Query 146054 AGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCC 146113 | |||| ||| ||||| ||||| ||||| ||||| || || | ||| |||| || | Sbjct 618339 AATGCCGCCATTGGAAACCGTATACGGGGCCCAGCTCGCCCGTCTCGTAGTGCGAGAGGC 618280 Query 146114 CGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCG-CG 146172 | | | | |||| | || ||| |||||| ||||||||||||||| |||| || | Sbjct 618279 CCACGCTGTCGAGATACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGA-TCCCCGCGTCT 618221 Query 146173 GAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCC 146232 |||||| | || |||| || || ||||||||| ||||| ||| || | Sbjct 618220 GAGAGCGGCCCGCTGTGCGTGCTTCCGGCGACGAACCAGAGAAGCTCGCCGATTACGGCG 618161 Query 146233 CTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | | ||| |||| ||| ||||| || ||||||| Sbjct 618160 CGCAGGAATACCCGCTTCGTGGTGAGGAGGGGGA 618127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073746352560