Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq393 455 3e-123
seq403 120 3e-22
>seq393
Length=255347
Score = 455 bits (504), Expect = 3e-123
Identities = 1235/1865 (66%), Gaps = 62/1865 (3%)
Strand=Plus/Minus
Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202
|||| || || || |||||||||||||| ||||| | |||||| | ||| || ||||
Sbjct 193175 TGGTACGGAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCATCCAGCAAAGTGCATCG 193116
Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262
|||| | || || | ||| | ||||| | || |||||||| ||| ||||
Sbjct 193115 ACGTGATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTCAACGACTGGGACTGGTCGA 193056
Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322
|||| || || || ||||| ||||| | || | | | ||| ||| |||||||| || |
Sbjct 193055 TAAAGGCACCACGGTCGGCAGCCATCTCGATGATTCTGCGCTGCGAGATTTCCCAAACAG 192996
Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGG---TATCG---ATTCGATCCTCTGGACGGACC 22376
||||||| || | | || |||| | ||| ||| | ||||| | | |||| |||
Sbjct 192995 TCTTGTAAAGCTCCTTGGTCTC-ATCGGGGATATTGGGAATTCG-TGCAATGGAACCACC 192938
Query 22377 CGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAAT 22436
| | | ||||| || || || | || ||||| || ||| || | |
Sbjct 192937 C----TCGGCGATGATGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACAAGGT 192882
Query 22437 CTTTGACCAG--ATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTA 22494
| |||| ||| ||| |||| ||||| || ||||| || | | || ||||| |||
Sbjct 192881 CCTTGAGCAGCCATG--GGTTGACCACCTGGAACTCACCAGCGAGCACACGGCGAGAGTA 192824
Query 22495 AATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGC 22554
||||||||| ||| | || ||||| | || |||||||| || ||||| | ||| || ||
Sbjct 192823 AATGTTGGAAGTGTATGGCTCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGC 192764
Query 22555 GGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTT 22614
|| ||||| || || | || |||||||| | | ||||||| | ||| || |||
Sbjct 192763 AGTTGGCATGGGTGCGATGAGCAGCGAGTTGCGGACACCGTGCTGGGCAATCTTGGCCTT 192704
Query 22615 GAGC--ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGC 22672
|||| ||| ||||||||| ||||||| || ||| || |||||||| ||||| ||
Sbjct 192703 GAGCTCATC--CCAGTCCCAGAGATCGGTAGGGGTC---TTCTCCCACATGTCGTACTGG 192649
Query 22673 AACACGCCGCGACTCG----CCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGC 22728
| | ||| || | | || || ||||| || ||||| |||||| | |
Sbjct 192648 AGAATGCC----CTTGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGGACCAAGTTCCTT 192593
Query 22729 GGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTT 22788
||||| |||||| || || ||| ||| || || ||||||||||| | ||||
Sbjct 192592 GGCAATATCGCAGGACGAAGTCAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTT 192533
Query 22789 CAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCAT 22848
| | ||| | | ||| | |||| |||| | ||| || || ||||
Sbjct 192532 GAGCTTCTTGGCCTGGTTGGACTCGAAGGGCAGGCGCAGGGCGAGGAAAGCATCGGCCAG 192473
Query 22849 ACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATT----CGACACTTTTGCCTCGG 22904
|||||| || || ||||| || ||||||| | || || | | |||||
Sbjct 192472 ACCCTGTACACCCATACCAATAGGTCGGTGGCGGAAGTTGCTGCGGCGC----GCCTCCT 192417
Query 22905 GCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTA 22964
| || || || || || | |||||||||| | ||| || | || || |
Sbjct 192416 CAACGGGGTAGTGGTTGACCTCAATAATCTTGTTCAAGTTGCGGGTGACGACTTGGGTAA 192357
Query 22965 TNNNNNNNNNNNNNTCAAAGTCGTAAACGCC-CGATTGTA--CAACAAACTTGTTGACGG 23021
| |||||| | |||| || ||||| | ||||| || | | |
Sbjct 192356 CCTCGTGCAGCTTTTGAAAGTCAAACTCGCCGCGCTTGTAGTCGACAAA--TGAAGGCAG 192299
Query 23022 --CGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079
||| ||| || || ||||| || || ||||| || | |||||||| ||||| ||
Sbjct 192298 AGCGAGCGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGCAGTGTACTCGACAATCTC 192239
Query 23080 GGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCA 23139
||| || || ||| | || ||||||| || |||||||||| || || |||||
Sbjct 192238 GGTGCAGAGGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCA 192179
Query 23140 CGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCG 23199
| ||||||||||||||| | || | || ||||| ||| | ||| | ||| ||
Sbjct 192178 AGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGAGCCTCAAGGATAGCATA 192119
Query 23200 CCACATAGTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGT 23258
||||| |||| ||| |||| |||| | || ||| | || | |||||| | | ||
Sbjct 192118 CCACAGCTTCTGGGCGCGAAC-CGTCTCGCGGCCCTTGTTTTGCTTCTCGTAGCTCTCGT 192060
Query 23259 ACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACAC 23317
||| ||| || || ||| | ||||| ||| ||||| || || || | | | || |||
Sbjct 192059 ACAGCGCTTCGAACTCGTCGCCGTAGACA-TCGGCAAGACCAGGGCACTCGTTGGGGCAC 192001
Query 23318 ATGAGACTCCACATTGA-GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376
|| || |||| || | || | || || || |||| || | || || ||||| ||
Sbjct 192000 ATCAGGGTCCA-ATCGCCGTTCTCTTGGACACGCTTCATGAACAAGTCGGGAATCCACAG 191942
Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436
||||||||| || ||||||||||| |||||||| || ||| |||||| || ||||
Sbjct 191941 AGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAG 191882
Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496
||| | || || || || ||||| ||||| ||||| | |||||| || || || | |||
Sbjct 191881 GAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTT 191822
Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556
||||| ||||| |||||||| || || ||||||||||| || | ||||| || | |||
Sbjct 191821 GTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAG 191762
Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAA 23615
|||||| || | ||| | |||||| | || || | || || | ||| |
Sbjct 191761 ACCGTTTGATGTTCCG-TTGGTGCCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTGGA 191703
Query 23616 CGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGT 23675
||| || ||| || || || | | || || |||| ||||| || || |||||||
Sbjct 191702 CGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGT 191643
Query 23676 AGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTT 23735
||||||| ||||||||||| || || | ||| | ||| || || ||||| || | |
Sbjct 191642 AGATGCCGTCGATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTG 191583
Query 23736 TGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-T 23794
|| || | || |||||| || || |||||| |||||||| | |||||| |
Sbjct 191582 ATGGTGTGCCTGCGTTGAACAGGGTTGGCGAGGCGTGTGTAAAGTACTTTTGCGACATGT 191523
Query 23795 AGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGC 23854
|| | ||| || || ||||| |||||||| || |||||||| |||| ||| || |||
Sbjct 191522 AG-TCGTAAGTCTCAATGGCCTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGC 191464
Query 23855 ATCATCATGTATTGAGGTCTCTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAA 23911
|| | ||||| ||| || | |||| ||| | ||| || | || || || ||
Sbjct 191463 ATGAGCATGTGTTGTGGGCGCTCGGCAACCTT---GCCATTTACACGGAGGAGGTAGGAC 191407
Query 23912 CGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCC 23971
|| | | ||| || || || || | | ||||| ||||| || |||| ||||| |||
Sbjct 191406 CGCTCGAGCGTCTTGAAGCCGAAGAACTGGTAGTTGAAGTCTCGGTCGTATACTATAGCC 191347
Query 23972 GAATT 23976
|| ||
Sbjct 191346 GAGTT 191342
>seq403
Length=285126
Score = 120 bits (132), Expect = 3e-22
Identities = 317/478 (66%), Gaps = 16/478 (3%)
Strand=Plus/Minus
Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017
|||| || ||| | | || ||||||| |||||||| || ||||| ||||| ||
Sbjct 107855 CCACCTTTGCCAACCGTCTTGTCGCGTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTT 107796
Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077
|| || | || || ||| ||||||| || || || |||||||| || || || ||
Sbjct 107795 CATTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCA 107736
Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137
||||| | || || || ||||||||| | || || || ||||| ||||| | | |||||
Sbjct 107735 ACGAGCTCATCTCTCGTGACGAGGGTATGCACACCGACTTTGCCTGCCTGCTCTTCTCTC 107676
Query 58138 ACATTGTCAATAAACCGACGCGGGATCGCATCTT----GGACATTATCACCGAGGCGGTC 58193
| | ||| || ||| | | | | || || || || |||||||| || |||
Sbjct 107675 TCCT---CAACAA-CCGCCCCAGCAAGGCTGCTGTCGAGGCTATCATCACCGAAGCTGTC 107620
Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253
| ||| || | ||||| ||| ||| || || || || | ||||| ||||||
Sbjct 107619 GAGATTGAGCAGGAGTTCCTCAGCGACGCGCTTCCTTGCGCTCTTCTCGGCATGAACGCC 107560
Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGA 58313
| | |||| ||||||||||||| || |||||| | || | || | || | ||
Sbjct 107559 ACTCTCATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTGCTCCTTG--CT-CTCGGC 107503
Query 58314 GAGC----GTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGA 58369
| | || | |||||| | | || || || || || ||| | |||||||| |
Sbjct 107502 AACCCCAAGT-ACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGC 107444
Query 58370 GGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427
|||||||| ||||| ||||| || ||| | || || ||||| ||| || |||
Sbjct 107443 TGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAAAAGGCCGGTGTCATG 107386
Score = 96.9 bits (106), Expect = 3e-15
Identities = 191/282 (68%), Gaps = 3/282 (1%)
Strand=Plus/Minus
Query 57573 TGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCT 57632
||| | |||||||| ||||| || || || || ||||||| ||| || | || || ||
Sbjct 108291 TGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTCTCC 108232
Query 57633 AAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACAC 57689
||||| || ||| ||| | | | || || ||| | ||| || ||
Sbjct 108231 AAGGACCTTCACGACTGGAACAAGCGATTGAACGACGACGAGCGCTTTTTCATCTCCCAT 108172
Query 57690 GTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTT 57749
|| | || ||||||||||| || ||||| ||||| |||||||| ||||||||| | ||
Sbjct 108171 GTCCTTGCCTTTTTCGCCGCCTCGGATGGCATTGTCAACGAGAACTTGGTCGAACGCTTC 108112
Query 57750 TCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAA 57809
|| ||||| ||| | | |||||| | ||||| ||||| || || | || ||
Sbjct 108111 TCCAGCGAAGTACAAATTCCCGAGGCGCGCTGCTTCTACGGTTTCCAGATCATGATGGAG 108052
Query 57810 AACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTAC 57851
||||| || || || | || || || || ||||| || |||
Sbjct 108051 AACGTCCACTCTGAGACTTACTCTCTCCTTATCGACACATAC 108010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445764093158880
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