Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq393 455 3e-123 seq403 120 3e-22 >seq393 Length=255347 Score = 455 bits (504), Expect = 3e-123 Identities = 1235/1865 (66%), Gaps = 62/1865 (3%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 |||| || || || |||||||||||||| ||||| | |||||| | ||| || |||| Sbjct 193175 TGGTACGGAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCATCCAGCAAAGTGCATCG 193116 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 |||| | || || | ||| | ||||| | || |||||||| ||| |||| Sbjct 193115 ACGTGATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTCAACGACTGGGACTGGTCGA 193056 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 |||| || || || ||||| ||||| | || | | | ||| ||| |||||||| || | Sbjct 193055 TAAAGGCACCACGGTCGGCAGCCATCTCGATGATTCTGCGCTGCGAGATTTCCCAAACAG 192996 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGG---TATCG---ATTCGATCCTCTGGACGGACC 22376 ||||||| || | | || |||| | ||| ||| | ||||| | | |||| ||| Sbjct 192995 TCTTGTAAAGCTCCTTGGTCTC-ATCGGGGATATTGGGAATTCG-TGCAATGGAACCACC 192938 Query 22377 CGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAAT 22436 | | | ||||| || || || | || ||||| || ||| || | | Sbjct 192937 C----TCGGCGATGATGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACAAGGT 192882 Query 22437 CTTTGACCAG--ATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTA 22494 | |||| ||| ||| |||| ||||| || ||||| || | | || ||||| ||| Sbjct 192881 CCTTGAGCAGCCATG--GGTTGACCACCTGGAACTCACCAGCGAGCACACGGCGAGAGTA 192824 Query 22495 AATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGC 22554 ||||||||| ||| | || ||||| | || |||||||| || ||||| | ||| || || Sbjct 192823 AATGTTGGAAGTGTATGGCTCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGC 192764 Query 22555 GGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTT 22614 || ||||| || || | || |||||||| | | ||||||| | ||| || ||| Sbjct 192763 AGTTGGCATGGGTGCGATGAGCAGCGAGTTGCGGACACCGTGCTGGGCAATCTTGGCCTT 192704 Query 22615 GAGC--ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGC 22672 |||| ||| ||||||||| ||||||| || ||| || |||||||| ||||| || Sbjct 192703 GAGCTCATC--CCAGTCCCAGAGATCGGTAGGGGTC---TTCTCCCACATGTCGTACTGG 192649 Query 22673 AACACGCCGCGACTCG----CCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGC 22728 | | ||| || | | || || ||||| || ||||| |||||| | | Sbjct 192648 AGAATGCC----CTTGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGGACCAAGTTCCTT 192593 Query 22729 GGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTT 22788 ||||| |||||| || || ||| ||| || || ||||||||||| | |||| Sbjct 192592 GGCAATATCGCAGGACGAAGTCAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTT 192533 Query 22789 CAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCAT 22848 | | ||| | | ||| | |||| |||| | ||| || || |||| Sbjct 192532 GAGCTTCTTGGCCTGGTTGGACTCGAAGGGCAGGCGCAGGGCGAGGAAAGCATCGGCCAG 192473 Query 22849 ACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATT----CGACACTTTTGCCTCGG 22904 |||||| || || ||||| || ||||||| | || || | | ||||| Sbjct 192472 ACCCTGTACACCCATACCAATAGGTCGGTGGCGGAAGTTGCTGCGGCGC----GCCTCCT 192417 Query 22905 GCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTA 22964 | || || || || || | |||||||||| | ||| || | || || | Sbjct 192416 CAACGGGGTAGTGGTTGACCTCAATAATCTTGTTCAAGTTGCGGGTGACGACTTGGGTAA 192357 Query 22965 TNNNNNNNNNNNNNTCAAAGTCGTAAACGCC-CGATTGTA--CAACAAACTTGTTGACGG 23021 | |||||| | |||| || ||||| | ||||| || | | | Sbjct 192356 CCTCGTGCAGCTTTTGAAAGTCAAACTCGCCGCGCTTGTAGTCGACAAA--TGAAGGCAG 192299 Query 23022 --CGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 ||| ||| || || ||||| || || ||||| || | |||||||| ||||| || Sbjct 192298 AGCGAGCGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGCAGTGTACTCGACAATCTC 192239 Query 23080 GGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCA 23139 ||| || || ||| | || ||||||| || |||||||||| || || ||||| Sbjct 192238 GGTGCAGAGGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCA 192179 Query 23140 CGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCG 23199 | ||||||||||||||| | || | || ||||| ||| | ||| | ||| || Sbjct 192178 AGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGAGCCTCAAGGATAGCATA 192119 Query 23200 CCACATAGTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGT 23258 ||||| |||| ||| |||| |||| | || ||| | || | |||||| | | || Sbjct 192118 CCACAGCTTCTGGGCGCGAAC-CGTCTCGCGGCCCTTGTTTTGCTTCTCGTAGCTCTCGT 192060 Query 23259 ACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACAC 23317 ||| ||| || || ||| | ||||| ||| ||||| || || || | | | || ||| Sbjct 192059 ACAGCGCTTCGAACTCGTCGCCGTAGACA-TCGGCAAGACCAGGGCACTCGTTGGGGCAC 192001 Query 23318 ATGAGACTCCACATTGA-GTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376 || || |||| || | || | || || || |||| || | || || ||||| || Sbjct 192000 ATCAGGGTCCA-ATCGCCGTTCTCTTGGACACGCTTCATGAACAAGTCGGGAATCCACAG 191942 Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436 ||||||||| || ||||||||||| |||||||| || ||| |||||| || |||| Sbjct 191941 AGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAG 191882 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 ||| | || || || || ||||| ||||| ||||| | |||||| || || || | ||| Sbjct 191881 GAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTT 191822 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 ||||| ||||| |||||||| || || ||||||||||| || | ||||| || | ||| Sbjct 191821 GTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAG 191762 Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAA 23615 |||||| || | ||| | |||||| | || || | || || | ||| | Sbjct 191761 ACCGTTTGATGTTCCG-TTGGTGCCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTGGA 191703 Query 23616 CGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGT 23675 ||| || ||| || || || | | || || |||| ||||| || || ||||||| Sbjct 191702 CGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGT 191643 Query 23676 AGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTT 23735 ||||||| ||||||||||| || || | ||| | ||| || || ||||| || | | Sbjct 191642 AGATGCCGTCGATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTG 191583 Query 23736 TGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT-T 23794 || || | || |||||| || || |||||| |||||||| | |||||| | Sbjct 191582 ATGGTGTGCCTGCGTTGAACAGGGTTGGCGAGGCGTGTGTAAAGTACTTTTGCGACATGT 191523 Query 23795 AGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGC 23854 || | ||| || || ||||| |||||||| || |||||||| |||| ||| || ||| Sbjct 191522 AG-TCGTAAGTCTCAATGGCCTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGC 191464 Query 23855 ATCATCATGTATTGAGGTCTCTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAA 23911 || | ||||| ||| || | |||| ||| | ||| || | || || || || Sbjct 191463 ATGAGCATGTGTTGTGGGCGCTCGGCAACCTT---GCCATTTACACGGAGGAGGTAGGAC 191407 Query 23912 CGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCC 23971 || | | ||| || || || || | | ||||| ||||| || |||| ||||| ||| Sbjct 191406 CGCTCGAGCGTCTTGAAGCCGAAGAACTGGTAGTTGAAGTCTCGGTCGTATACTATAGCC 191347 Query 23972 GAATT 23976 || || Sbjct 191346 GAGTT 191342 >seq403 Length=285126 Score = 120 bits (132), Expect = 3e-22 Identities = 317/478 (66%), Gaps = 16/478 (3%) Strand=Plus/Minus Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017 |||| || ||| | | || ||||||| |||||||| || ||||| ||||| || Sbjct 107855 CCACCTTTGCCAACCGTCTTGTCGCGTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTT 107796 Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077 || || | || || ||| ||||||| || || || |||||||| || || || || Sbjct 107795 CATTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCA 107736 Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137 ||||| | || || || ||||||||| | || || || ||||| ||||| | | ||||| Sbjct 107735 ACGAGCTCATCTCTCGTGACGAGGGTATGCACACCGACTTTGCCTGCCTGCTCTTCTCTC 107676 Query 58138 ACATTGTCAATAAACCGACGCGGGATCGCATCTT----GGACATTATCACCGAGGCGGTC 58193 | | ||| || ||| | | | | || || || || |||||||| || ||| Sbjct 107675 TCCT---CAACAA-CCGCCCCAGCAAGGCTGCTGTCGAGGCTATCATCACCGAAGCTGTC 107620 Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253 | ||| || | ||||| ||| ||| || || || || | ||||| |||||| Sbjct 107619 GAGATTGAGCAGGAGTTCCTCAGCGACGCGCTTCCTTGCGCTCTTCTCGGCATGAACGCC 107560 Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGA 58313 | | |||| ||||||||||||| || |||||| | || | || | || | || Sbjct 107559 ACTCTCATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTGCTCCTTG--CT-CTCGGC 107503 Query 58314 GAGC----GTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGA 58369 | | || | |||||| | | || || || || || ||| | |||||||| | Sbjct 107502 AACCCCAAGT-ACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGC 107444 Query 58370 GGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 |||||||| ||||| ||||| || ||| | || || ||||| ||| || ||| Sbjct 107443 TGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAAAAGGCCGGTGTCATG 107386 Score = 96.9 bits (106), Expect = 3e-15 Identities = 191/282 (68%), Gaps = 3/282 (1%) Strand=Plus/Minus Query 57573 TGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCT 57632 ||| | |||||||| ||||| || || || || ||||||| ||| || | || || || Sbjct 108291 TGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTCTCC 108232 Query 57633 AAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACAC 57689 ||||| || ||| ||| | | | || || ||| | ||| || || Sbjct 108231 AAGGACCTTCACGACTGGAACAAGCGATTGAACGACGACGAGCGCTTTTTCATCTCCCAT 108172 Query 57690 GTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTT 57749 || | || ||||||||||| || ||||| ||||| |||||||| ||||||||| | || Sbjct 108171 GTCCTTGCCTTTTTCGCCGCCTCGGATGGCATTGTCAACGAGAACTTGGTCGAACGCTTC 108112 Query 57750 TCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAA 57809 || ||||| ||| | | |||||| | ||||| ||||| || || | || || Sbjct 108111 TCCAGCGAAGTACAAATTCCCGAGGCGCGCTGCTTCTACGGTTTCCAGATCATGATGGAG 108052 Query 57810 AACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTAC 57851 ||||| || || || | || || || || ||||| || ||| Sbjct 108051 AACGTCCACTCTGAGACTTACTCTCTCCTTATCGACACATAC 108010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764093158880