Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq393 87.8 4e-12 >seq393 Length=255347 Score = 87.8 bits (96), Expect = 4e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| ||||||||||| | || ||| || || || || || || || ||| Sbjct 191688 CCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTCGATG 191629 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || || || | | | | | |||||||| ||||| | ||||||| ||| || Sbjct 191628 CTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCCTGCG 191569 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || ||||| || || || || || ||||| || | ||||||| || || || ||| Sbjct 191568 TTGAACAGGGTTGGCGAGGCGTGTGTAAAGTACTTTTGCGACATGTAGTCGTAAGTCTCA 191509 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 ||| | || ||||| ||||| |||||||| || || ||||| | ||||| || Sbjct 191508 ATGGCCTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGCATGAGCATGTGTTGT 191449 Query 95032 GGGCGCTC 95039 |||||||| Sbjct 191448 GGGCGCTC 191441 Score = 87.8 bits (96), Expect = 4e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 94407 CTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCA 94466 ||| || ||||||||| ||| | ||||| ||||| | ||| |||| ||| |||||||| Sbjct 192073 CTCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACCAGGGCA 192014 Query 94467 CTCGTGGGGGCACATCAGGGACCAAT 94492 ||||| |||||||||||||| ||||| Sbjct 192013 CTCGTTGGGGCACATCAGGGTCCAAT 191988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578750875370