Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq393 87.8 4e-12
>seq393
Length=255347
Score = 87.8 bits (96), Expect = 4e-12
Identities = 168/248 (68%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| ||||||||||| | || ||| || || || || || || || |||
Sbjct 191688 CCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTCGATG 191629
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911
|| || || | | | | | |||||||| ||||| | ||||||| ||| ||
Sbjct 191628 CTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCCTGCG 191569
Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971
|| ||||| || || || || || ||||| || | ||||||| || || || |||
Sbjct 191568 TTGAACAGGGTTGGCGAGGCGTGTGTAAAGTACTTTTGCGACATGTAGTCGTAAGTCTCA 191509
Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031
||| | || ||||| ||||| |||||||| || || ||||| | ||||| ||
Sbjct 191508 ATGGCCTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGCATGAGCATGTGTTGT 191449
Query 95032 GGGCGCTC 95039
||||||||
Sbjct 191448 GGGCGCTC 191441
Score = 87.8 bits (96), Expect = 4e-12
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 94407 CTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCA 94466
||| || ||||||||| ||| | ||||| ||||| | ||| |||| ||| ||||||||
Sbjct 192073 CTCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACCAGGGCA 192014
Query 94467 CTCGTGGGGGCACATCAGGGACCAAT 94492
||||| |||||||||||||| |||||
Sbjct 192013 CTCGTTGGGGCACATCAGGGTCCAAT 191988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989578750875370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |