Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq225 100 3e-16 >seq225 Length=197037 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 || || || |||| ||| | || ||||| | |||||| || || || |||||||| || Sbjct 138920 TGTCCACCACGTAGACGGAGCACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCT 138861 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 | || | |||||| ||||| ||||||||| |||| ||||||||||| || ||| Sbjct 138860 GAGAGGGTCCGTCCGTCTTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGA 138801 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || ||||| || ||||| || || |||| | || | ||||| ||| ||| Sbjct 138800 GGGATGCCCTCCTTGTCTTGGATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTCC 138741 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || | || | ||||| || || | || || ||||| |||||||| Sbjct 138740 ACCTCCAAGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 138691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507011776200480