Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq403 183 4e-41 seq393 181 2e-40 >seq403 Length=285126 Score = 183 bits (202), Expect = 4e-41 Identities = 575/890 (65%), Gaps = 73/890 (8%) Strand=Plus/Minus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| |||||||||| ||||| |||| || || ||||| | ||| ||| | ||||| ||| Sbjct 108291 TGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTCTCC 108232 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 |||||||| |||| ||| | | || |||| || ||||| || || || || Sbjct 108231 AAGGACCTTCACGACTGGAACAAGCGATTGAACGACGACGAGCGCTTTTTCATCTCCCAT 108172 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTC 125201 | | ||||| || |||| ||| ||||| || |||||||| || || | ||| ||| Sbjct 108171 GTCCTTGCCTTTTTCGCCGCCTCGGATGGCATTGTCAACGAGAACTTGGTCGAACGCTTC 108112 Query 125202 TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAG 125261 || || | ||||| |||| | ||||| ||||| ||||| |||||||| ||| Sbjct 108111 TCCAGCGAAGTACAAATTCCCGAGGCGCGCTGCTTCTACGGTTTCCAGATCATGATGGAG 108052 Query 125262 AACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---GCAA 125318 ||||| ||||| || | |||||| || || |||| ||||| |||| || ||| Sbjct 108051 AACGTCCACTCTGAGACTTACTCTCTCCTTATCGACACATACATCAGCGAGCCCAGGCAG 107992 Query 125319 CGTAAACACATGCTCTTTAACGCAATCGAC-ACGGT-----GC----------------- 125355 || || || ||||| ||||| || ||| || || || Sbjct 107991 CGCAAGTAC---CTCTTCAACGCCATTGACAACAGTAAGTCGCCCTACATCGCGTCACAT 107935 Query 125356 -----CGTCT--------------------ATACGTAAAAAGGCTCAATGGGTGATTCGG 125390 ||||| || || || |||||| | |||| |||| Sbjct 107934 TTACACGTCTAACGCGTCACAGTTCCCTGCATCCGCAAGAAGGCTGATTGGGCTCTTCGA 107875 Query 125391 TGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAG 125450 |||||| |||| | || || | | ||| || | || || || || |||||||| ||| Sbjct 107874 TGGATCTCTGACAAGAACTCCACCTTTGCCAACCGTCTTGTCGCGTTTGCCGCCGTTGAG 107815 Query 125451 GGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATG 125510 || |||||||| ||| || || ||||||| ||| | |||||||| || |||||| Sbjct 107814 GGTATCTTCTTCAGCGGTTCATTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATG 107755 Query 125511 CCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTT 125570 ||||| || || | |||||| | || ||||| |||||||| | ||| |||||| Sbjct 107754 CCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTATGCACACCGACTTT 107695 Query 125571 GCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGG 125628 ||| || || || || | || | | | ||| | ||| | | || || ||| Sbjct 107694 GCCTGCCTGCTCTTCTCTCTCCTCAACAACCGCCCCA--GCA-AGGCTGC--TGTCGAGG 107640 Query 125629 TCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTAC 125688 |||| | ||||| || || ||| || || ||||| || | ||| | || | Sbjct 107639 CTATCA------TCACCGAAGCTGTCGAGATTGAGCAGGAGTTCCTCAGCGACGCGCTTC 107586 Query 125689 CGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAG 125748 | | | | ||||||||| || || |||||| ||||||| ||||| || || | Sbjct 107585 CTTGCGCTCTTCTCGGCATGAACGCCACTCTCATGTGCCAGTACATTGAGTTCGTCGCCG 107526 Query 125749 ATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTTACAACGCCAAGAATCCCTTTG 125805 | ||||| | | | | | | || || |||| |||||||||| || ||||| | Sbjct 107525 ACCGTCTGC--TCCTTGCT-CTCGGCAACCCCAAGTACTACAACGCCACCAACCCCTTCG 107469 Query 125806 ATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 | |||||| | ||| || || | || ||||||||||| ||||||||| Sbjct 107468 ACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAG 107419 >seq393 Length=255347 Score = 181 bits (200), Expect = 2e-40 Identities = 344/501 (69%), Gaps = 14/501 (3%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || ||||| || | ||| ||||| | || || |||||||| || Sbjct 191810 CAGGGTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATGGCACGCTGAT 191869 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || |||| ||| | || ||||||| ||| || || |||| || ||| | || Sbjct 191870 GTCTTTGGCTTCCTGGACCTGCGCAAGAACCACGGAAAGGAGGAGGTTCGCGCCCGCGAT 191929 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 | || || || || ||| | || || |||||||||||||| ||| | || ||| | Sbjct 191930 CTCTTCTACGCTCTGTGGATTCCCGACTTGTTCATGAAGCGTGTCCAAGAGAACGGCGAT 191989 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| ||| ||||||||| || || || ||||| ||||| || ||||| ||||| Sbjct 191990 TGGACCCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGATGTCTACGGCGACGAGTTC 192049 Query 97116 GAGGCCAAGTACACGGCCTACG---AGCAA---GAGGGCCGATACGTGAGACGAGTCGAT 97169 || || |||| | ||||| ||||| ||||| || |||||| ||| Sbjct 192050 GAAGCGCTGTACGAGAGCTACGAGAAGCAAAACAAGGGC-----CGCGAGACGGTTCG-C 192103 Query 97170 GCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACAT 97228 || | |||| |||||| | || ||| | ||||||| |||||||| | || | || Sbjct 192104 GC-CCAGAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGACTGGTAACCCCTTTAT 192162 Query 97229 TCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGG 97288 |||||||||||| | || ||||| |||||||| || |||||||||| | Sbjct 192163 GCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATTCGCAG 192222 Query 97289 CTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGT 97348 |||||| || ||||| || ||||| |||||| | |||| || ||| || || ||| Sbjct 192223 CTCCAACCTCTGCACCGAGATTGTCGAGTACACTGCTCCTGATGAGGTCGCTGTCTGCAA 192282 Query 97349 TCTGGCATCGGTCAATCTGCC 97369 ||||| ||| || |||||| Sbjct 192283 CCTGGCTTCGCTCGCTCTGCC 192303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055365018640