Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq189 89.7 3e-13 >seq189 Length=186598 Score = 89.7 bits (98), Expect = 3e-13 Identities = 132/181 (73%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTTG 71478 ||||| | ||||||| |||||||||||||||||| | |||||| | || ||| || Sbjct 81909 GTCATACGCGAGGGAATGGCGTGGGGGTTGATGATCAAGTCGGGTGTGAGACCTTCCCTG 81968 Query 71479 TCGAAGGGCATGTCCTCCTGG-GTCAGGACAGCTCCGCAT-GTCCCCTTTTGCGCCGTGA 71536 |||||||||||| |||||| | ||| | | | || || |||||||| |||||| Sbjct 81969 GAGAAGGGCATGTCTTCCTGGCGGTAGG--TGATACCAATCGTACCCTTTTG-ACCGTGA 82025 Query 71537 -ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGACG 71595 |||||||||||||| || || | ||| | ||| |||||| | ||||||||| Sbjct 82026 CGAGACGCAAACTTGTCACCGATTTGTGGCACCTTGGTGGTCCTTGTACGAACCTTGACG 82085 Query 71596 A 71596 | Sbjct 82086 A 82086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338763090719856