Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_005946.1
Length=105903
Score E
Sequences producing significant alignments: (Bits) Value
seq189 89.7 3e-13
>seq189
Length=186598
Score = 89.7 bits (98), Expect = 3e-13
Identities = 132/181 (73%), Gaps = 6/181 (3%)
Strand=Plus/Plus
Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTTG 71478
||||| | ||||||| |||||||||||||||||| | |||||| | || ||| ||
Sbjct 81909 GTCATACGCGAGGGAATGGCGTGGGGGTTGATGATCAAGTCGGGTGTGAGACCTTCCCTG 81968
Query 71479 TCGAAGGGCATGTCCTCCTGG-GTCAGGACAGCTCCGCAT-GTCCCCTTTTGCGCCGTGA 71536
|||||||||||| |||||| | ||| | | | || || |||||||| ||||||
Sbjct 81969 GAGAAGGGCATGTCTTCCTGGCGGTAGG--TGATACCAATCGTACCCTTTTG-ACCGTGA 82025
Query 71537 -ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGACG 71595
|||||||||||||| || || | ||| | ||| |||||| | |||||||||
Sbjct 82026 CGAGACGCAAACTTGTCACCGATTTGTGGCACCTTGGTGGTCCTTGTACGAACCTTGACG 82085
Query 71596 A 71596
|
Sbjct 82086 A 82086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338763090719856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |