Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq197 118 2e-22
seq343 95.1 2e-15
>seq197
Length=498048
Score = 118 bits (130), Expect = 2e-22
Identities = 128/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| || | ||| | |||| ||||||| ||| |||||||| ||| |
Sbjct 92194 TGATCTACGAAGAGACCCGAGGTGTGCTCAAGACCTTCCTCGAGAGCGTTATCCGTGACG 92135
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
|| || ||| ||||||||||| || || ||||| ||||||||| | || ||||||| |
Sbjct 92134 CTGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTCACCTCCCTCGACGTCGTCTACG 92075
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
| | || || || ||||||| | || ||||| || ||||| |||||
Sbjct 92074 CCCTCAAGCGCCAGGGCCGTACCCTCTACGGTTTCGGTGGTTAAACTTCT 92025
Score = 91.5 bits (100), Expect = 2e-14
Identities = 78/94 (83%), Gaps = 2/94 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 92350 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 92292
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525
|| ||||| || || |||||||| |||||||||
Sbjct 92291 TCGCCGTCTCGCGCGCCGTGGTGGTGTCAAGCGT 92258
>seq343
Length=964243
Score = 95.1 bits (104), Expect = 2e-15
Identities = 82/99 (83%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| ||| || || |||||||| || ||||| ||||| || ||
Sbjct 42205 GCCAAGCGCCACCGCAAGAT-TCTCCGCGACAACATCCAGGGTATCACTAAGCCTGCCAT 42147
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||||||||| ||||||||||| || ||||||||| ||||
Sbjct 42146 CCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTC 42108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074821476902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |