Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq197 118 2e-22 seq343 95.1 2e-15 >seq197 Length=498048 Score = 118 bits (130), Expect = 2e-22 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| || | ||| | |||| ||||||| ||| |||||||| ||| | Sbjct 92194 TGATCTACGAAGAGACCCGAGGTGTGCTCAAGACCTTCCTCGAGAGCGTTATCCGTGACG 92135 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 || || ||| ||||||||||| || || ||||| ||||||||| | || ||||||| | Sbjct 92134 CTGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTCACCTCCCTCGACGTCGTCTACG 92075 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 | | || || || ||||||| | || ||||| || ||||| ||||| Sbjct 92074 CCCTCAAGCGCCAGGGCCGTACCCTCTACGGTTTCGGTGGTTAAACTTCT 92025 Score = 91.5 bits (100), Expect = 2e-14 Identities = 78/94 (83%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || ||||||||||| || || Sbjct 92350 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 92292 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525 || ||||| || || |||||||| ||||||||| Sbjct 92291 TCGCCGTCTCGCGCGCCGTGGTGGTGTCAAGCGT 92258 >seq343 Length=964243 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/99 (83%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| ||| || || |||||||| || ||||| ||||| || || Sbjct 42205 GCCAAGCGCCACCGCAAGAT-TCTCCGCGACAACATCCAGGGTATCACTAAGCCTGCCAT 42147 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||||||||| ||||||||||| || ||||||||| |||| Sbjct 42146 CCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTC 42108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074821476902