Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq393 385 1e-101
>seq393
Length=255347
Score = 385 bits (426), Expect = 1e-101
Identities = 1167/1780 (66%), Gaps = 22/1780 (1%)
Strand=Plus/Plus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450
||||| | |||||| | ||| |||||||| ||| | ||||| | ||| ||
Sbjct 191384 TTCGGCTTCAAGACGCTCGAGCGGTCCTACCTCCTCCGTGTAAATGGCAAGGTTGCCGAG 191443
Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510
||||| || || ||| | ||||| ||||| | || || || || || ||||
Sbjct 191444 CGCCCACAACACATGCTCATGCGAGTTGCCGTCGGCATACACGGCGATGACATTGAAAAG 191503
Query 363511 GCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568
|| ||||| || || | || | | || || ||| || || |||||| |||||||
Sbjct 191504 GCCATTGAGACTTACGA-CTAC-ATGTCGCAAAAGTACTTTACACACGCCTCGCCAACCC 191561
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
||| ||| || || || | || |||||||| || ||||| || | | |||||||
Sbjct 191562 TGTTCAACGCAGGCACACCATCACCCCAGATGTCCTCCTGCTTCCTCATCGACATGAAGG 191621
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
| || |||||| || |||| |||||||| |||| ||| ||| | || ||||||| |
Sbjct 191622 AAGACAGCATCGACGGCATCTACGACACACTCAAGACTTGCGCTTTGATCTCCAAGACCG 191681
Query 363689 CAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGG 363746
| ||||| |||||| | | || ||||| | ||||| || | | |||||| ||||
Sbjct 191682 CTGGCGGTATTGGTCTCAACG-TCCACCGAATCCGTGCCACCGG-CTCCTACATTGGCGG 191739
Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806
||| ||| || || || || |||||||||| ||||| | |||| || || |
Sbjct 191740 CACCAACGGAACATCAAACGGTCTCATTCCCATGCTCCGTGTATACAACAACACCGCTCG 191799
Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866
||||||||||||||||| |||||| ||| || ||||| || || || |||||
Sbjct 191800 CTACGTCGACCAGGGTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATG 191859
Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926
|| || ||| | |||| || || || || || || ||| ||||| ||||| | ||
Sbjct 191860 GCACGCTGATGTCTTTGGCTTCCTGGACCTGCGCAAGAACCACGGAAAGGAGGAGGTTCG 191919
Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986
|| || ||||| ||||| || || ||| || | ||| || |||||||| || | |
Sbjct 191920 CGCCCGCGATCTCTTCTACGCTCTGTGGATTCCCGACTTGTTCATGAAGCGTGTCCAAG- 191978
Query 363987 AGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045
|| | ||||| | || | ||||| |||| || || |||||| ||||||| | |
Sbjct 191979 AGAACGGCGATTGGACCCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGATGTCTACG 192038
Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105
| ||||| | | || || ||||| | || || | | |||| || ||||
Sbjct 192039 GCGACGAGTTCGAAGCGCTGTACGAGAGCTACGAGAAGCAAAACAAGGGCCGCGAGACGG 192098
Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165
||| ||| |||||||| |||| ||| ||| | || | |||| |||||| || | ||||
Sbjct 192099 TTCGCGCCCAGAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGACTGGTAACCCCT 192158
Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225
|||| | ||||| ||| | |||||||||||| ||||||| || |||| || || ||||
Sbjct 192159 TTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATTC 192218
Query 364226 AGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284
|||| |||||| || ||||||||| | || ||||| ||||| || ||| || ||
Sbjct 192219 -GCAGCTCCAACCTCTGCACCGAGATTGTCGAGTACACTGCTCCTGATGAGGTCGCTGTC 192277
Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG-----TAAAAG-ATGGTACTTTTGAC 364338
|| ||||| || ||| |||| || || | |||| || ||| || ||||||
Sbjct 192278 TGCAACCTGGCTTCGCTCGCTCTGCCTTCATTTGTCGACTACAAGCGCGGCGAGTTTGAC 192337
Query 364339 CACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGAC 364398
|| | || | || || ||| | | || |||| | ||||| |||| ||
Sbjct 192338 TTTCAAAAGCTGCACGAGGTTACCCAAGTCGTCACCCGCAACTTGAACAAGATTATTGAG 192397
Query 364399 AAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGT 364458
|| | || || || || || || || | || || || || ||||||
Sbjct 192398 GTCAACCACTACCCCGTTGAGGAGGCGCGCCGCAGCAACTTCCGCCACCGACCTATTGGT 192457
Query 364459 CTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCT 364518
| ||||||||||| || || || | ||| | || || | || || ||
Sbjct 192458 ATGGGTGTACAGGGTCTGGCCGATGCTTTCCTCGCCCTGCGCCTGCCCTTCGAGTCCAAC 192517
Query 364519 GACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCT 364578
| || || || | ||||||| || || || || ||||| ||||| |
Sbjct 192518 CAGGCCAAGAAGCTCAACATTCAGATCTTCGAGACCATCTACCACGCCGCTCTGACTTCG 192577
Query 364579 TCGTGTGAT-TTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTC 364637
|| || ||| ||| ||| | | || ||| || || ||||| || ||| | ||
Sbjct 192578 TCCTGCGATATTGCCAAGGAAC-TTGGTCCTTACGAGACCTACGAGGGATCTCCTGTCTC 192636
Query 364638 GCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGA 364697
|||| | |||||| || | ||| | || || | | | ||| |||||||
Sbjct 192637 CAAGGGCATTCTCCAGTACGACATGTGGGAGAAGACCCCTACCGATCTCTGGGACTGGGA 192696
Query 364698 TACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCAT 364757
| ||| |||| || |||| ||| |||||||| || | | || |||||
Sbjct 192697 TGAGCTCAAGGCCAAGATTGCCCAGCACGGTGTCCGCAACTCGCTGCTCATCGCACCCAT 192756
Query 364758 GCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAG 364817
||| || || || || | ||||| ||||||||||||||||||||||| || | ||
Sbjct 192757 GCCAACTGCCTCCACCTCGCAGATTCTCGGAAACAACGAGTGCTTCGAGCCATACACTTC 192816
Query 364818 CAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGT 364877
||| |||| || ||||| || || | || || || | ||| || || | || |
Sbjct 192817 CAACATTTACTCTCGCCGTGTGCTCGCTGGTGAGTTCCAGGTGGTCAACCCATGGCTGCT 192876
Query 364878 CAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGC 364937
|||||| ||| |||| || |||||| ||| | |||||||||| ||||||||||
Sbjct 192877 CAAGGACCTTGTCGACATGGGCCTGTGGTCTGAGAACATGAAGAACCGCATCATCGCCGA 192936
Query 364938 TAATGGTT-CTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAA 364996
||||| | |||| | ||||| | || || || ||| ||||||| |
Sbjct 192937 GGGTGGTTCCATTGCACGA-ATTCCCAATATCCCCGATGAGACCAAGGAGCTTTACAAGA 192995
Query 364997 CCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTA 365056
| || |||||||| || ||| | |||| || ||||| ||||| || ||||| ||||
Sbjct 192996 CTGTTTGGGAAATCTCGCAGCGCAGAATCATCGAGATGGCTGCCGACCGTGGTGCCTTTA 193055
Query 365057 TCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACAT 365116
|| ||| ||||||||| ||| | ||||| |||| ||| | |||| | || |
Sbjct 193056 TCGACCAGTCCCAGTCGTTGAACATCCACATGAAGGAGCCTACCATGGGCAAGATCACGT 193115
Query 365117 CCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| ||||| || || ||||| ||||||||||| ||
Sbjct 193116 CGATGCACTTTGCTGGATGGAAGCTTGGTCTTAAGACGGG 193155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303346686523748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |