Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq393 385 1e-101 >seq393 Length=255347 Score = 385 bits (426), Expect = 1e-101 Identities = 1167/1780 (66%), Gaps = 22/1780 (1%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | |||||| | ||| |||||||| ||| | ||||| | ||| || Sbjct 191384 TTCGGCTTCAAGACGCTCGAGCGGTCCTACCTCCTCCGTGTAAATGGCAAGGTTGCCGAG 191443 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 ||||| || || ||| | ||||| ||||| | || || || || || |||| Sbjct 191444 CGCCCACAACACATGCTCATGCGAGTTGCCGTCGGCATACACGGCGATGACATTGAAAAG 191503 Query 363511 GCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACAA 363568 || ||||| || || | || | | || || ||| || || |||||| ||||||| Sbjct 191504 GCCATTGAGACTTACGA-CTAC-ATGTCGCAAAAGTACTTTACACACGCCTCGCCAACCC 191561 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| ||| || || || | || |||||||| || ||||| || | | ||||||| Sbjct 191562 TGTTCAACGCAGGCACACCATCACCCCAGATGTCCTCCTGCTTCCTCATCGACATGAAGG 191621 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || |||||| || |||| |||||||| |||| ||| ||| | || ||||||| | Sbjct 191622 AAGACAGCATCGACGGCATCTACGACACACTCAAGACTTGCGCTTTGATCTCCAAGACCG 191681 Query 363689 CAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGG 363746 | ||||| |||||| | | || ||||| | ||||| || | | |||||| |||| Sbjct 191682 CTGGCGGTATTGGTCTCAACG-TCCACCGAATCCGTGCCACCGG-CTCCTACATTGGCGG 191739 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 ||| ||| || || || || |||||||||| ||||| | |||| || || | Sbjct 191740 CACCAACGGAACATCAAACGGTCTCATTCCCATGCTCCGTGTATACAACAACACCGCTCG 191799 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||||||||||||||||| |||||| ||| || ||||| || || || ||||| Sbjct 191800 CTACGTCGACCAGGGTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATG 191859 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || || ||| | |||| || || || || || || ||| ||||| ||||| | || Sbjct 191860 GCACGCTGATGTCTTTGGCTTCCTGGACCTGCGCAAGAACCACGGAAAGGAGGAGGTTCG 191919 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 || || ||||| ||||| || || ||| || | ||| || |||||||| || | | Sbjct 191920 CGCCCGCGATCTCTTCTACGCTCTGTGGATTCCCGACTTGTTCATGAAGCGTGTCCAAG- 191978 Query 363987 AGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045 || | ||||| | || | ||||| |||| || || |||||| ||||||| | | Sbjct 191979 AGAACGGCGATTGGACCCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGATGTCTACG 192038 Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105 | ||||| | | || || ||||| | || || | | |||| || |||| Sbjct 192039 GCGACGAGTTCGAAGCGCTGTACGAGAGCTACGAGAAGCAAAACAAGGGCCGCGAGACGG 192098 Query 364106 TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCT 364165 ||| ||| |||||||| |||| ||| ||| | || | |||| |||||| || | |||| Sbjct 192099 TTCGCGCCCAGAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGACTGGTAACCCCT 192158 Query 364166 ATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTC 364225 |||| | ||||| ||| | |||||||||||| ||||||| || |||| || || |||| Sbjct 192159 TTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATTC 192218 Query 364226 AGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 |||| |||||| || ||||||||| | || ||||| ||||| || ||| || || Sbjct 192219 -GCAGCTCCAACCTCTGCACCGAGATTGTCGAGTACACTGCTCCTGATGAGGTCGCTGTC 192277 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG-----TAAAAG-ATGGTACTTTTGAC 364338 || ||||| || ||| |||| || || | |||| || ||| || |||||| Sbjct 192278 TGCAACCTGGCTTCGCTCGCTCTGCCTTCATTTGTCGACTACAAGCGCGGCGAGTTTGAC 192337 Query 364339 CACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGAC 364398 || | || | || || ||| | | || |||| | ||||| |||| || Sbjct 192338 TTTCAAAAGCTGCACGAGGTTACCCAAGTCGTCACCCGCAACTTGAACAAGATTATTGAG 192397 Query 364399 AAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGT 364458 || | || || || || || || || | || || || || |||||| Sbjct 192398 GTCAACCACTACCCCGTTGAGGAGGCGCGCCGCAGCAACTTCCGCCACCGACCTATTGGT 192457 Query 364459 CTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCT 364518 | ||||||||||| || || || | ||| | || || | || || || Sbjct 192458 ATGGGTGTACAGGGTCTGGCCGATGCTTTCCTCGCCCTGCGCCTGCCCTTCGAGTCCAAC 192517 Query 364519 GACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCT 364578 | || || || | ||||||| || || || || ||||| ||||| | Sbjct 192518 CAGGCCAAGAAGCTCAACATTCAGATCTTCGAGACCATCTACCACGCCGCTCTGACTTCG 192577 Query 364579 TCGTGTGAT-TTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTC 364637 || || ||| ||| ||| | | || ||| || || ||||| || ||| | || Sbjct 192578 TCCTGCGATATTGCCAAGGAAC-TTGGTCCTTACGAGACCTACGAGGGATCTCCTGTCTC 192636 Query 364638 GCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGA 364697 |||| | |||||| || | ||| | || || | | | ||| ||||||| Sbjct 192637 CAAGGGCATTCTCCAGTACGACATGTGGGAGAAGACCCCTACCGATCTCTGGGACTGGGA 192696 Query 364698 TACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCAT 364757 | ||| |||| || |||| ||| |||||||| || | | || ||||| Sbjct 192697 TGAGCTCAAGGCCAAGATTGCCCAGCACGGTGTCCGCAACTCGCTGCTCATCGCACCCAT 192756 Query 364758 GCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAG 364817 ||| || || || || | ||||| ||||||||||||||||||||||| || | || Sbjct 192757 GCCAACTGCCTCCACCTCGCAGATTCTCGGAAACAACGAGTGCTTCGAGCCATACACTTC 192816 Query 364818 CAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGT 364877 ||| |||| || ||||| || || | || || || | ||| || || | || | Sbjct 192817 CAACATTTACTCTCGCCGTGTGCTCGCTGGTGAGTTCCAGGTGGTCAACCCATGGCTGCT 192876 Query 364878 CAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGC 364937 |||||| ||| |||| || |||||| ||| | |||||||||| |||||||||| Sbjct 192877 CAAGGACCTTGTCGACATGGGCCTGTGGTCTGAGAACATGAAGAACCGCATCATCGCCGA 192936 Query 364938 TAATGGTT-CTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAA 364996 ||||| | |||| | ||||| | || || || ||| ||||||| | Sbjct 192937 GGGTGGTTCCATTGCACGA-ATTCCCAATATCCCCGATGAGACCAAGGAGCTTTACAAGA 192995 Query 364997 CCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTA 365056 | || |||||||| || ||| | |||| || ||||| ||||| || ||||| |||| Sbjct 192996 CTGTTTGGGAAATCTCGCAGCGCAGAATCATCGAGATGGCTGCCGACCGTGGTGCCTTTA 193055 Query 365057 TCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACAT 365116 || ||| ||||||||| ||| | ||||| |||| ||| | |||| | || | Sbjct 193056 TCGACCAGTCCCAGTCGTTGAACATCCACATGAAGGAGCCTACCATGGGCAAGATCACGT 193115 Query 365117 CCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | ||||| || || ||||| ||||||||||| || Sbjct 193116 CGATGCACTTTGCTGGATGGAAGCTTGGTCTTAAGACGGG 193155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346686523748