Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq225 82.4 6e-11
>seq225
Length=197037
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/212 (69%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
||||||||| || ||||| || ||||| ||||| ||||| ||| | || ||| |||||
Sbjct 138690 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAGACCATCACCTTGGAGGTGGAATCCAG 138749
Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
|||||| | ||||| ||||| || || || || || ||| |||| || |
Sbjct 138750 CGACAC-CATCGACAACGTAAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACC 138808
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
||||| | || || | ||| || || ||| | ||||| | ||| | | || || |
Sbjct 138809 AGCAACGTCTCATCTTTGCTGGTAAGCAACTTGAAGACGGACGGACCCTCTCAGACTACA 138868
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTG 115495
|||| || || |||||||| | ||| |||||
Sbjct 138869 ACATCCAGAAGGAGTCTACACTCCATTTGGTG 138900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425341853873680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |