Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq393 248 8e-61
seq225 113 4e-20
seq385 102 8e-17
seq178 89.7 5e-13
>seq393
Length=255347
Score = 248 bits (274), Expect = 8e-61
Identities = 936/1449 (65%), Gaps = 41/1449 (3%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| ||||| ||||| || || | |||||| || | || | ||| || ||| | ||
Sbjct 192864 TTGACCACCTGGAACTCACCAGCGAGCACACGGCGAGAGTAAATGTTGGAAGTGTATGGC 192805
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| || || || || || | ||| | || || |||||| || |
Sbjct 192804 TCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTGGCATGGGTGCGATG 192745
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||| | ||||||| || | |||| ||| | |||| |||||
Sbjct 192744 AGCAGCGAGTTGCGGACACCGTGCTGGGCAATCTTGGCCTTGAGCTCATCCCAGTCCCAG 192685
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGG-GCT 145296
|| || || || ||||||||||||||||| | |||||||| | | | || | |
Sbjct 192684 AGATCGGTAGGGGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTGGAGACAGGAGAT 192625
Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGA 145354
||| | | | | |||| | ||||||| ||||| | ||||| || ||||
Sbjct 192624 CCCTCGTAGGTCTC-GTAA--GGACCAAGTTCCTTGGCAATATCGCAGGACGAAGTCAGA 192568
Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414
||| || || || |||||| || || |||||||| | | || | | | ||||
Sbjct 192567 GCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCCTGGTTGGACTCG 192508
Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474
| |||| |||||| | ||||||||||| || ||||||| |||| || || ||
Sbjct 192507 AAGGGCAGGCGCAGGGCGAGGAAAGCATCGGCCAGACCCTGTACACCCATACCAATAGGT 192448
Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATT 145534
|| || | |||||| | |||| ||| | || || | || || |||||
Sbjct 192447 CGGTGGCGGAAGTTGCTGCGGCGCGCCTCCTCAACGGGGTAGTGGTTGACCTCAATAATC 192388
Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594
|| |||||||| || || || | |||| | ||| ||||| ||||||||| |
Sbjct 192387 TTGTTCAAGTTGCGGGTGACGACTTGGGTAACCTCGTGCAGCTTTTGAAAGTCAAA-CTC 192329
Query 145595 GCCTCG-TCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGT 145653
||| || | | | ||| | | | |||| ||| |||| || || || ||
Sbjct 192328 GCCGCGCTTGTAGTCGACAAATGAAGGCAGAGCGAGCGAAGCCAGGTTGCAGACAGCGAC 192269
Query 145654 CTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCC 145713
||| || | | |||| | || ||||||| ||| | ||| | ||||| ||
Sbjct 192268 CTCATCAGGAGCAGTGTACTCGACAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGTGCC 192209
Query 145714 CAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCC 145773
||| || | ||| || || || | |||||| || |||||||||||||| | || ||
Sbjct 192208 CAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACC 192149
Query 145774 AGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTG 145833
|||||| ||| | ||| | |||| | || | ||| || || ||| |
Sbjct 192148 AGTCTCAGTCTGAGCCTCAAGGATAGCATACCACAGCTTCTGGGCGCGAACCGTC----- 192094
Query 145834 GTAGCGGCCCT-------CTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGT 145886
| |||||||| |||| ||||| || ||| ||| | || ||| || ||||
Sbjct 192093 -TCGCGGCCCTTGTTTTGCTTC-TCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGT 192036
Query 145887 AGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGT 145946
|| ||||| || || || |||| |||||| |||||||| | ||| ||||||| | |
Sbjct 192035 AGACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTT 191976
Query 145947 TGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGC 146006
||| |||| ||| ||||| || || | |||||| ||||| | | ||||| || ||
Sbjct 191975 GGACACGCTTCATGAACAAGTCGGGAATCCACAGAGCGTAGAAGAGATCGCGGGC---GC 191919
Query 146007 AATCCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACTATAGATGTCCGCGTGC 146062
| |||| | || || ||| || || | || | | | ||| || ||||||
Sbjct 191918 GAACCTCCTCCTTTCCGTGGTTCTTGC-GCAGGTCCAGGAAGCCAAAGACATCAGCGTGC 191860
Query 146063 CACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGA 146119
|| || |||| |||| ||| | ||| ||| || |||||||||||||| ||||
Sbjct 191859 CATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAG 191800
Query 146120 CGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTA 146179
|| | ||||||| | || || | |||||| || ||| | | | ||||| ||
Sbjct 191799 CGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTTGATGTTCCGTTGGTG 191740
Query 146180 GAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCG 146239
| || || |||| || || | | || || || | || | |||||| ||
Sbjct 191739 CCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTGGACGTTGAGACCAATACCGCCAGCG 191680
Query 146240 TACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--G 146296
|||||| || |||| |||| ||| || |||||||||||||| ||||| ||
Sbjct 191679 GTCTTGGAGATCAAAGCGCAAGTC-TTGAGTGTGTCGTAGATGCCGTCGATGCTGTCTTC 191621
Query 146297 CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAAC 146356
|||| ||| ||| || ||||| ||| ||||||| | || || || || ||||
Sbjct 191620 CTTC--ATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCCTGCGTTGAAC 191563
Query 146357 AACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCAT-CATCCGATACGTTTCGATAGC 146415
| || || ||||| ||||| ||| | ||| | || || || || || ||
Sbjct 191562 AGGGTTGGCGAGGCGTGTGTAAAGTACTTTTGCGACATGTAGTCG-TAAGTCTCAATGGC 191504
Query 146416 GTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCG 146475
| || |||||| ||||| || ||||| | || || ||||||||||||||||| || ||
Sbjct 191503 CTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGCATGAGCATGTGTTGTGGGCG 191444
Query 146476 CTCCGCCAC 146484
||| || ||
Sbjct 191443 CTCGGCAAC 191435
>seq225
Length=197037
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | ||| |||||||| || |||||||| ||||||
Sbjct 138689 CCACCACGGAGACGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 138630
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| || |||||||| || ||| |||| | |||||| ||||||||||||
Sbjct 138629 AGAGTACGGCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAGGG 138570
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | || || | ||||| |
Sbjct 138569 ATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATCGTGTCTGAAGACTCAACT 138510
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || || || || || || ||||| ||||||||
Sbjct 138509 TCCAACGTGATAGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 138463
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| ||||| | || |||||||| || |||||||| ||
Sbjct 138917 CCACCACGTAGACGGAGCACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGAG 138858
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||| || || ||||| || || |||| | ||| |||||||||||||||
Sbjct 138857 AGGGTCCGTCCGTCTTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGG 138798
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | || | || ||| |||| || |
Sbjct 138797 ATGCCCTCCTTGTCTTGGATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTCCACC 138738
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || ||||| || ||||| || |||||
Sbjct 138737 TCCAAGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 138691
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||||| ||||| || | ||| | ||| |||||||| ||||||||||| ||| |
Sbjct 138461 CCACCGCGCAGGCGCAGGACGAGATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 138402
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| || ||||| || ||| | || | |||||||| ||||| ||
Sbjct 138401 AGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGA 138342
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || ||| ||||| | || | || |||| |||||||
Sbjct 138341 ATGCCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGACT 138282
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|| | || | ||| || |||||
Sbjct 138281 TCAAGCGTGATGGTCTTGCCGGT 138259
Score = 89.7 bits (98), Expect = 5e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
|| || || | ||| | ||| |||||||| || |||||||| ||| || ||||||
Sbjct 138166 CGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA 138107
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
||||| ||||||||||| ||| |||| || || |||||||| || || || || || |||
Sbjct 138106 TCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCTGGGGGAATGCCCTCCTTG 138047
Query 131140 TC 131141
||
Sbjct 138046 TC 138045
>seq385
Length=1101030
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || || || || || | |||||||||||| || |||||||| ||
Sbjct 327341 CCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 327400
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| || |||||||| ||| |||| | ||||||||||||||| ||
Sbjct 327401 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 327460
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 327461 ATGCCCTCCTTGTC 327474
>seq178
Length=462551
Score = 89.7 bits (98), Expect = 5e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | ||||||||||| || |||||||| |||
Sbjct 349845 CCACCACGGAGACGGAGGACCAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAA 349904
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| || ||||| || ||| |||| |||||||| |||||||| ||
Sbjct 349905 AGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCCGGGGGA 349964
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 349965 ATGCCCTCCTTGTC 349978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472010357333760
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