Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq393 248 8e-61 seq225 113 4e-20 seq385 102 8e-17 seq178 89.7 5e-13 >seq393 Length=255347 Score = 248 bits (274), Expect = 8e-61 Identities = 936/1449 (65%), Gaps = 41/1449 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||| || || | |||||| || | || | ||| || ||| | || Sbjct 192864 TTGACCACCTGGAACTCACCAGCGAGCACACGGCGAGAGTAAATGTTGGAAGTGTATGGC 192805 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| || || || || || | ||| | || || |||||| || | Sbjct 192804 TCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTGGCATGGGTGCGATG 192745 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | ||||||| || | |||| ||| | |||| ||||| Sbjct 192744 AGCAGCGAGTTGCGGACACCGTGCTGGGCAATCTTGGCCTTGAGCTCATCCCAGTCCCAG 192685 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGG-GCT 145296 || || || || ||||||||||||||||| | |||||||| | | | || | | Sbjct 192684 AGATCGGTAGGGGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTGGAGACAGGAGAT 192625 Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGA 145354 ||| | | | | |||| | ||||||| ||||| | ||||| || |||| Sbjct 192624 CCCTCGTAGGTCTC-GTAA--GGACCAAGTTCCTTGGCAATATCGCAGGACGAAGTCAGA 192568 Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414 ||| || || || |||||| || || |||||||| | | || | | | |||| Sbjct 192567 GCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCCTGGTTGGACTCG 192508 Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474 | |||| |||||| | ||||||||||| || ||||||| |||| || || || Sbjct 192507 AAGGGCAGGCGCAGGGCGAGGAAAGCATCGGCCAGACCCTGTACACCCATACCAATAGGT 192448 Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATT 145534 || || | |||||| | |||| ||| | || || | || || ||||| Sbjct 192447 CGGTGGCGGAAGTTGCTGCGGCGCGCCTCCTCAACGGGGTAGTGGTTGACCTCAATAATC 192388 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 || |||||||| || || || | |||| | ||| ||||| ||||||||| | Sbjct 192387 TTGTTCAAGTTGCGGGTGACGACTTGGGTAACCTCGTGCAGCTTTTGAAAGTCAAA-CTC 192329 Query 145595 GCCTCG-TCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGT 145653 ||| || | | | ||| | | | |||| ||| |||| || || || || Sbjct 192328 GCCGCGCTTGTAGTCGACAAATGAAGGCAGAGCGAGCGAAGCCAGGTTGCAGACAGCGAC 192269 Query 145654 CTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCC 145713 ||| || | | |||| | || ||||||| ||| | ||| | ||||| || Sbjct 192268 CTCATCAGGAGCAGTGTACTCGACAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGTGCC 192209 Query 145714 CAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCC 145773 ||| || | ||| || || || | |||||| || |||||||||||||| | || || Sbjct 192208 CAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACC 192149 Query 145774 AGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTG 145833 |||||| ||| | ||| | |||| | || | ||| || || ||| | Sbjct 192148 AGTCTCAGTCTGAGCCTCAAGGATAGCATACCACAGCTTCTGGGCGCGAACCGTC----- 192094 Query 145834 GTAGCGGCCCT-------CTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGT 145886 | |||||||| |||| ||||| || ||| ||| | || ||| || |||| Sbjct 192093 -TCGCGGCCCTTGTTTTGCTTC-TCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGT 192036 Query 145887 AGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGT 145946 || ||||| || || || |||| |||||| |||||||| | ||| ||||||| | | Sbjct 192035 AGACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTT 191976 Query 145947 TGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGC 146006 ||| |||| ||| ||||| || || | |||||| ||||| | | ||||| || || Sbjct 191975 GGACACGCTTCATGAACAAGTCGGGAATCCACAGAGCGTAGAAGAGATCGCGGGC---GC 191919 Query 146007 AATCCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACTATAGATGTCCGCGTGC 146062 | |||| | || || ||| || || | || | | | ||| || |||||| Sbjct 191918 GAACCTCCTCCTTTCCGTGGTTCTTGC-GCAGGTCCAGGAAGCCAAAGACATCAGCGTGC 191860 Query 146063 CACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGA 146119 || || |||| |||| ||| | ||| ||| || |||||||||||||| |||| Sbjct 191859 CATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAG 191800 Query 146120 CGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTA 146179 || | ||||||| | || || | |||||| || ||| | | | ||||| || Sbjct 191799 CGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTTGATGTTCCGTTGGTG 191740 Query 146180 GAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCG 146239 | || || |||| || || | | || || || | || | |||||| || Sbjct 191739 CCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTGGACGTTGAGACCAATACCGCCAGCG 191680 Query 146240 TACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--G 146296 |||||| || |||| |||| ||| || |||||||||||||| ||||| || Sbjct 191679 GTCTTGGAGATCAAAGCGCAAGTC-TTGAGTGTGTCGTAGATGCCGTCGATGCTGTCTTC 191621 Query 146297 CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAAC 146356 |||| ||| ||| || ||||| ||| ||||||| | || || || || |||| Sbjct 191620 CTTC--ATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCCTGCGTTGAAC 191563 Query 146357 AACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCAT-CATCCGATACGTTTCGATAGC 146415 | || || ||||| ||||| ||| | ||| | || || || || || || Sbjct 191562 AGGGTTGGCGAGGCGTGTGTAAAGTACTTTTGCGACATGTAGTCG-TAAGTCTCAATGGC 191504 Query 146416 GTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCG 146475 | || |||||| ||||| || ||||| | || || ||||||||||||||||| || || Sbjct 191503 CTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGCATGAGCATGTGTTGTGGGCG 191444 Query 146476 CTCCGCCAC 146484 ||| || || Sbjct 191443 CTCGGCAAC 191435 >seq225 Length=197037 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| |||||||| || |||||||| |||||| Sbjct 138689 CCACCACGGAGACGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 138630 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || |||||||| || ||| |||| | |||||| |||||||||||| Sbjct 138629 AGAGTACGGCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAGGG 138570 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | ||||| | Sbjct 138569 ATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATCGTGTCTGAAGACTCAACT 138510 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || ||||| |||||||| Sbjct 138509 TCCAACGTGATAGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 138463 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | || |||||||| || |||||||| || Sbjct 138917 CCACCACGTAGACGGAGCACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGAG 138858 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || || ||||| || || |||| | ||| ||||||||||||||| Sbjct 138857 AGGGTCCGTCCGTCTTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGG 138798 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || ||| |||| || | Sbjct 138797 ATGCCCTCCTTGTCTTGGATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTCCACC 138738 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || ||||| || ||||| || ||||| Sbjct 138737 TCCAAGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 138691 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||||| || | ||| | ||| |||||||| ||||||||||| ||| | Sbjct 138461 CCACCGCGCAGGCGCAGGACGAGATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 138402 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| || ||||| || ||| | || | |||||||| ||||| || Sbjct 138401 AGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGA 138342 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||||| | || | || |||| ||||||| Sbjct 138341 ATGCCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGACT 138282 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | || | ||| || ||||| Sbjct 138281 TCAAGCGTGATGGTCTTGCCGGT 138259 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || | ||| | ||| |||||||| || |||||||| ||| || |||||| Sbjct 138166 CGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA 138107 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| |||| || || |||||||| || || || || || ||| Sbjct 138106 TCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCTGGGGGAATGCCCTCCTTG 138047 Query 131140 TC 131141 || Sbjct 138046 TC 138045 >seq385 Length=1101030 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || || || | |||||||||||| || |||||||| || Sbjct 327341 CCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 327400 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| || |||||||| ||| |||| | ||||||||||||||| || Sbjct 327401 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 327460 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 327461 ATGCCCTCCTTGTC 327474 >seq178 Length=462551 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 349845 CCACCACGGAGACGGAGGACCAGGTGGAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAA 349904 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| || ||||| || ||| |||| |||||||| |||||||| || Sbjct 349905 AGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCCGGGGGA 349964 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 349965 ATGCCCTCCTTGTC 349978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010357333760