Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq252 111 1e-19
>seq252
Length=295129
Score = 111 bits (122), Expect = 1e-19
Identities = 205/301 (68%), Gaps = 0/301 (0%)
Strand=Plus/Minus
Query 6187 ATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTA 6246
|||| | ||| | |||||||||||||| ||| ||| ||| | ||| | ||||| |
Sbjct 173074 ATGTCACCGACCCCTTCTACCGCTACAAGATGGAGCGTATCCAGTCTAAGATTGAGGGCA 173015
Query 6247 AGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGAC 6306
|||| ||||| || || || |||||||||||| || | || ||| | |||| |
Sbjct 173014 AGGGCAACGGCATCAAGACTGTCATTGTCAACCTGACCAGTGTGGCTGGCTCCCTCGCCC 172955
Query 6307 GCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTG 6366
||||| || | || | || || || |||| ||||| || || ||||| | |
Sbjct 172954 GCCCTCCCTCTCACGTCATCAAGTACTTTGGGTTTGAACTCGGAGCCCAGACCAACACTA 172895
Query 6367 ATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACT 6426
| ||| |||| |||| ||| | ||||| | || || | |||||| |||||||
Sbjct 172894 GCCCCAACGACGACCGCTGGATCATCAACGGTGCTCACGACGCCAGCAAGCTCCAGGACT 172835
Query 6427 TACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486
||||||||||| || |||||| || || || | ||||| | ||||| || ||||
Sbjct 172834 ACCTTGACGGCTTCATCTCCAAGTTCGTCCTCTGCAAGAAATGCAAGAACCCTGAAACCG 172775
Query 6487 A 6487
|
Sbjct 172774 A 172774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334945509982034
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |