Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq252 111 1e-19 >seq252 Length=295129 Score = 111 bits (122), Expect = 1e-19 Identities = 205/301 (68%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 6187 ATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTA 6246 |||| | ||| | |||||||||||||| ||| ||| ||| | ||| | ||||| | Sbjct 173074 ATGTCACCGACCCCTTCTACCGCTACAAGATGGAGCGTATCCAGTCTAAGATTGAGGGCA 173015 Query 6247 AGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGAC 6306 |||| ||||| || || || |||||||||||| || | || ||| | |||| | Sbjct 173014 AGGGCAACGGCATCAAGACTGTCATTGTCAACCTGACCAGTGTGGCTGGCTCCCTCGCCC 172955 Query 6307 GCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTG 6366 ||||| || | || | || || || |||| ||||| || || ||||| | | Sbjct 172954 GCCCTCCCTCTCACGTCATCAAGTACTTTGGGTTTGAACTCGGAGCCCAGACCAACACTA 172895 Query 6367 ATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACT 6426 | ||| |||| |||| ||| | ||||| | || || | |||||| ||||||| Sbjct 172894 GCCCCAACGACGACCGCTGGATCATCAACGGTGCTCACGACGCCAGCAAGCTCCAGGACT 172835 Query 6427 TACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCG 6486 ||||||||||| || |||||| || || || | ||||| | ||||| || |||| Sbjct 172834 ACCTTGACGGCTTCATCTCCAAGTTCGTCCTCTGCAAGAAATGCAAGAACCCTGAAACCG 172775 Query 6487 A 6487 | Sbjct 172774 A 172774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945509982034