Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq225 87.8 2e-12
>seq225
Length=197037
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||| || || | ||||| | ||||| ||||| ||
Sbjct 138463 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACTATCACGTTGGAAGTTGAGTCTTCA 138522
Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || ||| | || | ||| ||||| || || || || || |||
Sbjct 138523 GACACGATTGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAGGGTATCCCTCCGGAC 138579
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | || || || || || || | ||||| | || ||| || |||| |||
Sbjct 138580 CAACAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAAGACGGCCGTACTCTGAGCGACTAC 138639
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || || ||||| || ||| | || ||
Sbjct 138640 AACATCCAGAAGGAGTCCACCCTGCATCTTGTCCT 138674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433325813589410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |