Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq225 87.8 2e-12 >seq225 Length=197037 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || || | ||||| | ||||| ||||| || Sbjct 138463 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACTATCACGTTGGAAGTTGAGTCTTCA 138522 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || ||| | || | ||| ||||| || || || || || ||| Sbjct 138523 GACACGATTGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAGGGTATCCCTCCGGAC 138579 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || || || || || || | ||||| | || ||| || |||| ||| Sbjct 138580 CAACAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAAGACGGCCGTACTCTGAGCGACTAC 138639 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || ||||| || ||| | || || Sbjct 138640 AACATCCAGAAGGAGTCCACCCTGCATCTTGTCCT 138674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325813589410