Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq283 113 9e-20
seq403 104 5e-17
>seq283
Length=372480
Score = 113 bits (124), Expect = 9e-20
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
||||||| |||| ||||| ||||| ||||| || ||||| | || ||||||||||||
Sbjct 227563 TCATTGGTGCCAACGGTGCTGGTAAATCTACACTCATCAAGATGCTTACTGGCGAGACCA 227622
Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293
|| ||||| |||| |||||| |||||| |||| || | ||| || ||||
Sbjct 227623 TTCCCCAAGAGGGAACCGTCGAGAAGCACCCCAACTTGCGTATTGGCTACATCAAGCAGC 227682
Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353
||||| | | ||| | |||| ||| |||| | ||| ||||||||||| | |||||||
Sbjct 227683 ACGCTCTTGAGCACGTTGAGATGCACATGGAGAAGACACCTAACCAATATCTCCAGTGGC 227742
Query 280354 GCTATGC 280360
| || ||
Sbjct 227743 GATACGC 227749
>seq403
Length=285126
Score = 104 bits (114), Expect = 5e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || ||||| ||||||||||||||||||||| |||
Sbjct 107423 TCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 107482
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| | |||||| | ||| || || | || | ||||| || || ||||| |
Sbjct 107483 GCGTTGTAGTACTTGGGGTTGCCGAGAGCAAGGAGCAGACGGTCGGCGACGAACTCAATG 107542
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | ||| || | ||||||||| | | | ||||||| || || | || |
Sbjct 107543 TACTGGCACATGAGAGTGGCGTTCATGCCGAGAAGAGCGCAAGGAAGCGCGTCGCTGAGG 107602
Query 251743 AATTCCT 251749
|| ||||
Sbjct 107603 AACTCCT 107609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027831347968174
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |