Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq283 113 9e-20 seq403 104 5e-17 >seq283 Length=372480 Score = 113 bits (124), Expect = 9e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 ||||||| |||| ||||| ||||| ||||| || ||||| | || |||||||||||| Sbjct 227563 TCATTGGTGCCAACGGTGCTGGTAAATCTACACTCATCAAGATGCTTACTGGCGAGACCA 227622 Query 280234 AGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293 || ||||| |||| |||||| |||||| |||| || | ||| || |||| Sbjct 227623 TTCCCCAAGAGGGAACCGTCGAGAAGCACCCCAACTTGCGTATTGGCTACATCAAGCAGC 227682 Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353 ||||| | | ||| | |||| ||| |||| | ||| ||||||||||| | ||||||| Sbjct 227683 ACGCTCTTGAGCACGTTGAGATGCACATGGAGAAGACACCTAACCAATATCTCCAGTGGC 227742 Query 280354 GCTATGC 280360 | || || Sbjct 227743 GATACGC 227749 >seq403 Length=285126 Score = 104 bits (114), Expect = 5e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| ||||||||||||||||||||| ||| Sbjct 107423 TCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 107482 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | |||||| | ||| || || | || | ||||| || || ||||| | Sbjct 107483 GCGTTGTAGTACTTGGGGTTGCCGAGAGCAAGGAGCAGACGGTCGGCGACGAACTCAATG 107542 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||| || | ||||||||| | | | ||||||| || || | || | Sbjct 107543 TACTGGCACATGAGAGTGGCGTTCATGCCGAGAAGAGCGCAAGGAAGCGCGTCGCTGAGG 107602 Query 251743 AATTCCT 251749 || |||| Sbjct 107603 AACTCCT 107609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027831347968174