Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq225 185 2e-41 seq403 125 1e-23 >seq225 Length=197037 Score = 185 bits (204), Expect = 2e-41 Identities = 184/236 (78%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| | ||| || || || || | ||||| || || || ||||| || |||||||| || Sbjct 138924 TTACTGTCCACCACGTAGACGGAGCACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTA 138865 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 || ||||| |||| || ||||| | ||||| || || || ||||| | ||| ||||| Sbjct 138864 GTCTGAGAGGGTCCGTCCGTCTTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTC 138805 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG- 68406 || || ||||| ||||||||||| ||||| | ||| ||| ||||||||||| |||| Sbjct 138804 CGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTTACGTTGTCGATGGTGTC-GCTGG 138746 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| || |||||||||||||| ||||| ||||| ||||||||||| || |||||| Sbjct 138745 ATTCCACCTCCAAGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 138690 Score = 156 bits (172), Expect = 8e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || || | || | || || |||||||| || |||||||| || ||| Sbjct 138691 TTCCACCACGGAGACGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGC 138632 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || || | || ||||| | |||||| || ||||| ||||| | |||||||| || | Sbjct 138631 TCAGAGTACGGCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAG 138572 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || || |||||||| |||||||| | |||||| || || ||||||| || || | Sbjct 138571 GGATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATCGTGTCTGAAGACTCAA 138512 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||| ||||| || || || || |||||||||||||| |||||||| Sbjct 138511 CTTCCAACGTGATAGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 138463 Score = 136 bits (150), Expect = 7e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || ||||| | || | || || |||||||| || |||||||| || ||||| Sbjct 138178 CCTCCACGGAGGCGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 138119 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || | | ||| ||||| || ||| Sbjct 138118 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCTGGGGGA 138059 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| |||||| ||||||||||| | || || || Sbjct 138058 ATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 137999 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | |||||| || || || |||| Sbjct 137998 TCAAGGGTGATCGTCTTGCCGGTGA 137974 Score = 136 bits (150), Expect = 7e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||||| || | || || |||||||| || || ||||| || ||||| Sbjct 138461 CCACCGCGCAGGCGCAGGACGAGATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 138402 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||| |||||||| || || | || || || || ||| Sbjct 138401 AGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGA 138342 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||||||||| | ||||||| || |||||||| | || || ||| Sbjct 138341 ATGCCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGACT 138282 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | |||||||| || || || Sbjct 138281 TCAAGCGTGATGGTCTTGCCGGT 138259 >seq403 Length=285126 Score = 125 bits (138), Expect = 1e-23 Identities = 294/440 (67%), Gaps = 8/440 (2%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||| ||||| || || || |||||||||||||| |||||| | Sbjct 107386 CATGACACCGGCCTTTTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 107445 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || ||| |||||||||||| |||||||| |||| | | |||||||| || Sbjct 107446 AAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGGGGTTGCC 107505 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | ||||| || |||||||| |||||||||| ||| || | ||| Sbjct 107506 GAGAGCAAGGAGCAGACGGTCGGCGACGAACTCAATGTACTGGCACATGAGAGTGGCGTT 107565 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | ||| || | ||||||| | ||| |||| || | |||| || Sbjct 107566 CATGCCGAGAAGAGCGCAAGGAAGCGCGTCGCTGAGGAACTCCTGCTCAATCTCGACAGC 107625 Query 10175 TTCCTCGACGAT--GCTCTTTACCA--CGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 ||| || ||| ||| | || | | ||| | | ||||| ||| || Sbjct 107626 TTCGGTGATGATAGCCTCGACAGCAGCCTTGCTGGGGC-GGTTGTT---GAGGAGAGAGA 107681 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 | || || |||| | ||| | |||||||| || ||||| ||||||||| | Sbjct 107682 AGAGCAGGCAGGCAAAGTCGGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGA 107741 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | |||||||||||||| || || || || |||||| |||| | ||| || ||| Sbjct 107742 AGGTAAGACCGGGCATGAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGAACCGC 107801 Query 10351 AGAACAGAAGACCCTCCACG 10370 ||| | | |||||| ||| Sbjct 107802 TGAAGAAGATACCCTCAACG 107821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921617630604080