Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq225 127 2e-24
>seq225
Length=197037
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || | ||| | || || || || || |||||||| |||
Sbjct 138692 ATTCCACCACGGAGACGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 138633
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|||| |||||| ||||| || || ||||||||| |||||||||||||||||||||||
Sbjct 138632 CTCAGAGTACGGCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGA 138573
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| |||||| || | | |||| ||||| | || ||
Sbjct 138572 GGGATACCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATCGTGTCTGAAGACTCA 138513
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| ||||| || || || || ||||||||
Sbjct 138512 ACTTCCAACGTGATAGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 138463
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| |||||||| | | || ||||| | ||||| || || || |||||||| ||
Sbjct 138917 CCACCACGTAGACGGAGCACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGAG 138858
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || || ||||||||||| |||||||| |||||||||| || |||||||||||
Sbjct 138857 AGGGTCCGTCCGTCTTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGG 138798
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
||||| || ||||| ||||| |||| | || | ||||||| ||||||| ||
Sbjct 138797 ATGCCCTCCTTGTCTTGGATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTCCACC 138738
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| ||| | || || || || ||||| || || || || |||||
Sbjct 138737 TCCAAGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 138691
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | || || | ||| | || || || || ||||||||||| |||
Sbjct 138464 ATACCACCGCGCAGGCGCAGGACGAGATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCG 138405
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || ||||| || || ||| | || || ||||| || |||||
Sbjct 138404 GACAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGG 138345
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| |||||| || | | |||| |||||||| || |||
Sbjct 138344 GGAATGCCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCG 138285
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTT 114368
|| || | || | || |||||||||| ||| ||
Sbjct 138284 ACTTCAAGCGTGATGGTCTTGCCGGTCACTGTTGTT 138249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420132280159368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |