Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq393 374 2e-98 seq403 262 7e-65 >seq393 Length=255347 Score = 374 bits (414), Expect = 2e-98 Identities = 1195/1834 (65%), Gaps = 71/1834 (4%) Strand=Plus/Minus Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCAC 244098 |||||| || ||||||||||| | | || ||| || ||| ||| ||||| Sbjct 192916 CATGTTCTCAGACCACAGGCCCATGTCGACAAGGTCCTTGAGCAGCCATGGGTTGACCAC 192857 Query 244099 CTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCT 244158 ||| ||||| || | ||||| ||||| ||| | |||| || ||||||| || Sbjct 192856 CTGGAACTCACCAGCGAGCACACGGCGAGAGTAAATGTTGGAAGTGTATGGCTCGAAGCA 192797 Query 244159 CTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACT 244218 ||| |||| || || ||||||| ||| ||||| |||||||| | | ||||| Sbjct 192796 CTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTGGCATGGGTGCGATGAGCAGCGA 192737 Query 244219 GTTCCTCACGCCGTGCCTCTGGATGCGGAGTCT-GAGCTCGTTCCAGTCCCACATGCCCG 244277 ||| | || |||||| | | | | | || |||||| | ||||||||| | | | Sbjct 192736 GTTGCGGACACCGTGC-TGGGCAATCTTGGCCTTGAGCTCATCCCAGTCCCAGAGATCGG 192678 Query 244278 -AGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGG 244336 || |||| || | ||||||||| |||| || | |||||| ||| || Sbjct 192677 TAGGGGTCTTCTC----------CCACATGTCGTACTGGAGAATGCCCTTGGAGACAGGA 192628 Query 244337 CTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTCGAG 244395 |||||||||||| ||| ||||| || ||| | | ||| | ||| || Sbjct 192627 GATCCCTCGTAGGTCTCGTAAGGACCAAGTTCCTTGGCAATATCGCAGGACGAAGTC-AG 192569 Query 244396 GGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT 244455 ||||||| ||||||||||||||||||| |||| | | ||||| | | | Sbjct 192568 AGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCCTGGTTGGACTC 192509 Query 244456 GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGG 244515 |||||| | || || | ||| | |||||||| ||||| || || || || || || Sbjct 192508 GAAGGGCAGGCGCAGGGCGAGGAAAGCATCGGCCAGACCCTGTACACCCATACCAATAGG 192449 Query 244516 TCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575 || ||| || |||| ||| || || |||||||| |||| | || || | Sbjct 192448 TCGGTGGCGGAAGTTGCTGCGGCGCGCCTCCTCAACGGGGTAGTGGTTGACCTCAATAAT 192389 Query 244576 CTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTC 244635 |||||| | ||||||||||| | || || ||| |||| |||||||| |||| Sbjct 192388 CTTGTTCAAGTTGCGGGTGACGACTTGGGTAACCTCGTGCAGCTTTTGAAAGTCAAACTC 192329 Query 244636 GTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTT 244695 | | ||| | || || ||||| || |||| |||||||| Sbjct 192328 G----------CCGCGCTTGTAGTCG--ACAAATGAAGGCAGAGCGAGCGAAGCCAGGTT 192281 Query 244696 GCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCA 244755 |||||| || ||||| || | ||||||| ||||||||||||||||||||| || Sbjct 192280 GCAGACAGCGACCTCATCAGGAGCAGTGTACTCGACAATCTCGGTGCAGAGGTTGGAGCT 192221 Query 244756 CTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCAT 244815 ||||||||||||| || || ||| |||| |||||| || |||||||||||||| Sbjct 192220 GCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCAT 192161 Query 244816 GAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTT 244875 ||||| || ||||| ||| || | |||| | ||| || | | || Sbjct 192160 AAAGGGGTTACCAGTCTCAGTCTGAGCCTCAAGGATAGCATACCACAGCTTCTGGGCGCG 192101 Query 244876 GACCGTCCTGCGAGCCTTGCCCTCTGC--CTCGTAGCGGGTGTACAGGGCCTCGAACTCG 244933 |||||| ||| ||||| | ||| |||||||| |||||| || ||||||||| Sbjct 192100 AACCGTCTCGCGGCCCTTGT--TTTGCTTCTCGTAGCTCTCGTACAGCGCTTCGAACTCG 192043 Query 244934 GGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCG 244993 ||| |||| ||| | || || |||||| |||||||| || |||| |||||| Sbjct 192042 TCGCCGTAGACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGGGTCCAATCGCCG 191983 Query 244994 CCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTG 245053 || | ||| | || |||||| | |||||| ||||| || || | |||||| || | | Sbjct 191982 TTCTCTTGGACACGCTTCATGAACAAGTCGGGAATCCACAGAGCGTAGAAGAGATCGCGG 191923 Query 245054 GTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACG 245113 | | ||| ||| || |||||| | ||| |||| ||| ||||||| || || Sbjct 191922 GCGCGAACCTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAGGAAGCCAAAGACATCAGCG 191863 Query 245114 TGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACC 245173 ||||| ||||| | ||||| || | ||| || || ||||||||||| |||||||| | Sbjct 191862 TGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGA-- 191805 Query 245174 ATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 | | |||||| |||| | | || || | || | | ||||| || || Sbjct 191804 --CGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTTGATGTTCC 191747 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA---GGTTGCTGATGGACATGCCTAG 245286 ||||||||| ||||||| ||| || | | || ||| | | || | || | Sbjct 191746 GTTGGTGCCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTGGACGTTG---AGACCAAT 191690 Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346 ||||| ||| ||||||||| | ||||| |||||| ||||| ||||| || || Sbjct 191689 ACCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTCGAT 191630 Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGA 245406 |||||| |||||||| || || ||||||||||||| |||||| || ||| | Sbjct 191629 GCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCCTGC 191570 Query 245407 GTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTG 245466 ||||||||| || || |||||| |||||||| ||| | | | |||| |||| Sbjct 191569 GTTGAACAGGGTTGGCGAGGCGTGTGTAAAGTACTTTTGCGACATGTAGTCGTAAGTCTC 191510 Query 245467 GAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCT--CATGAGGGTGTGC 245524 | || |||| |||||||| | ||| | ||| || |||||| |||| Sbjct 191509 AATGGCCTTTTCAATGTCATCGCCGTG--TATGCCGACGGCAACTCGCATGAGCATGTGT 191452 Query 245525 TG-GGGCGTCTCGATGGGTCCCTCGGGTCCCTT------GAGCATGTAGGAGCGCTCGAG 245577 || ||||| ||| || ||| | || || ||| | |||||| |||||||| Sbjct 191451 TGTGGGCG-CTC---GGCAACCTTG---CCATTTACACGGAGGAGGTAGGACCGCTCGAG 191399 Query 245578 CGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAG 245637 ||||||||| || ||| || |||| ||||| || || | || | || ||| Sbjct 191398 CGTCTTGAAGCCGAAGAACTGGTAGTTGAAGTCTCGGTCGTATACTATAGCCGAGTTGAG 191339 Query 245638 TCTCTCGGCGTGCTTCTGACTGACCTCGTAAAACTTTTGCGCTATGAGGGGAGCCCTGAG 245697 ||| ||||| | |||| |||| | ||| | | | | || | ||| ||| Sbjct 191338 CTCCTCTGCGTGTTCCTGAATGACTTTGTAGACGTAGTCGGAGATCATGGGCTGCCTCTT 191279 Query 245698 CCCGGTGTCCGGATTGACGTTGAACCAGAG--CCTCT-TGCACACCTCCGAGAACTTGGG 245754 ||| | | || ||||||| | |||| | ||| || || ||||||| ||| Sbjct 191278 GCCGTTCTTGGGGTTGACGTAGTTGTAGAGTTCGTCTATG---ACGGCCGAGAA-TTGCT 191223 Query 245755 GC-TGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCAACTTGCTGTAGTCGG 245813 | | || |||| || || || | || || || ||||| || | || |||||||| Sbjct 191222 TCTTTGTCTGCTTGTGGAGATTTGACACGGCGATACGCGCGGCGAGAATGGCGTAGTCGG 191163 Query 245814 GGTGAGTGGTGGTCATGTTGGAGGCCGTGTGGGC 245847 | || ||||||||||||| | |||||| | ||| Sbjct 191162 GATGTGTGGTGGTCATGTATGCGGCCGTCTCGGC 191129 >seq403 Length=285126 Score = 262 bits (290), Expect = 7e-65 Identities = 602/908 (66%), Gaps = 80/908 (9%) Strand=Plus/Minus Query 42301 TCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGG 42360 ||||| |||||||||||||| || || ||||||||||||||||||||| || Sbjct 108293 TCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTCT 108234 Query 42361 CCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAA 42417 |||||||| || |||| | | | || || |||| |||||| || Sbjct 108233 CCAAGGACCTTCACGACTGGAACAAGCGATTGAACGACGACGAGCGCTTTTTCATCTCCC 108174 Query 42418 ACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGT 42477 | | || ||||| ||||||||||| || ||||| ||||| |||||| ||| | | | Sbjct 108173 ATGTCCTTGCCTTTTTCGCCGCCTCGGATGGCATTGTCAACGAGAACTTGGTCGAACGCT 108114 Query 42478 TCATGAAAGAGGTGCAGTACTTT--GAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 || | || || || | || |||||||||||||||||||| |||||||| || Sbjct 108113 TCTCCAGCGAAGTACA--AATTCCCGAGGCGCGCTGCTTCTACGGTTTCCAGATCATGAT 108056 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||||| ||||||||| ||| | || || |||| |||||| || ||| Sbjct 108055 GGAGAACGTCCACTCTGAGACTTACTCTCTCCTTATCGACACATACATCAGCGAGCCCAG 107996 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGA------------------------- 42630 |||| || || ||||| ||||| || | | Sbjct 107995 GCAGCGCAAGTACCTCTTCAACGCCATTGACAACAGTAAGTCGCCCTACATCGCGTCACA 107936 Query 42631 -----------------------TGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAA 42667 | ||||||||| |||||||| || ||||| || Sbjct 107935 TTTACACGTCTAACGCGTCACAGTTCCCTGCATCCGCAAGAAGGCTGATTGGGCTCTTCG 107876 Query 42668 CTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCG 42726 |||||| | | || | | || || | | | | || || || ||| ||||||| | Sbjct 107875 ATGGATCTCT-GACAAGAACTCCACCTTTGCCAACCGTCTTGTCGCGTTTGCCGCCGTTG 107817 Query 42727 AGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCG 42785 |||| ||||||||| || | |||||||||||||||||| | ||| || ||| || Sbjct 107816 AGGGTATCTTCTTCAGCGGTTCATTCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTC- 107758 Query 42786 ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGAC 42845 |||||||| || |||||||| ||||| |||||| | |||||||| |||| | ||| Sbjct 107757 ATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTATGCACACCGAC 107698 Query 42846 TTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCTCG-AAGGAGCGGGTC 42902 ||||||||||| || ||||| | ||||| |||| |||| | |||| ||| Sbjct 107697 TTTGCCTGCCTGCTCTTCTC---TCTCCTCA---ACAACCGCCCCAGCAAGGCTGCTGTC 107644 Query 42903 CGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCC 42962 ||| |||||||| || || || ||||| ||| |||||||||||| | |||| || Sbjct 107643 GAGGCTATCATCACCGAAGCTGTCGAGATTGAGCAGGAGTTCCTCAGCGACGCGCTTCCT 107584 Query 42963 GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGAC 43022 | || ||||||||||| | ||||||||| ||||||| ||| |||||||||| Sbjct 107583 TGCGCTCTTCTCGGCATGAACGCCACTCTCATGTGCCAGTACATTGAGTTCGTCGCCGAC 107524 Query 43023 CATCTCCTGTGCCAGATGGGTCTCAGCCGCC------TCTACAACACGCCGTGCCCCTTC 43076 | ||| || || | | |||| || || ||||||| | | ||||||| Sbjct 107523 CGTCTGCT---CC---TTGCTCTCGGCAACCCCAAGTACTACAACGCCACCAACCCCTTC 107470 Query 43077 GACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCC 43136 ||||| ||||||||||||||| | | |||||||||||||| ||||||||||| || | Sbjct 107469 GACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGT 107410 Query 43137 GACTACCA 43144 |||||||| Sbjct 107409 GACTACCA 107402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944334313044640