Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq393 295 8e-75 seq403 143 3e-29 >seq393 Length=255347 Score = 295 bits (326), Expect = 8e-75 Identities = 1124/1743 (64%), Gaps = 41/1743 (2%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| |||||||| || || ||||||| || | |||||||| | Sbjct 193170 CGGAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCATCCAGCAAAGTGCATCGACGTG 193111 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | || || | |||| || ||||| ||||| || ||||| ||| Sbjct 193110 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTCAACGACTGGGACTGGTCGATAAAG 193051 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAGTTC 113774 ||||| || || ||||| || || | | || | | ||||||||| ||||| Sbjct 193050 GCACCACGGTCGGCAGCCATCTCGATGA--TTCTGCGCTGCGAGATTTCCCAAACAGTCT 192993 Query 113775 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCT 113834 |||| || | ||| | ||||| ||||||| || | ||||| |||||| | Sbjct 192992 TGTAAAGCTCCTTGGTCTCATCGGGGATATTGGGAATTCGTGCAATGGAACCACCCTCGG 192933 Query 113835 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 113894 || ||| | | |||||| | || ||||| || || || | || |||| | | Sbjct 192932 CGATGATGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACAAGGTCCTTGAGCA 192873 Query 113895 G--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGG 113951 | ||| | |||| || |||||||| ||||| || | ||| || || |||| Sbjct 192872 GCCATGGGT--TGACCACCTGGAACTCACCAGCGAGCACACGGCG-AGAGTAAATGTTGG 192816 Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCA 114011 ||||||||||| |||||||| ||||| || | || || | ||||||||| || |||| Sbjct 192815 AAGTGTATGGCTCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTGGCA 192756 Query 114012 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGT 114071 ||||||| ||||| || ||| |||| ||| | | ||| ||||||| | | Sbjct 192755 TGGGTGCGATGAGCAGCGAGTTGCGGACACCGTGCTGGGCAATCTTGGCCTTGAGCTCAT 192696 Query 114072 CCCAGTCGTAGTTGAGCTTT----GTCTCCCCCTGCCACATATCAAACTGGAGGATACCT 114127 ||||||| || || | | |||| || |||||| || ||||||| || || Sbjct 192695 CCCAGTCCCAG-AGATCGGTAGGGGTCT---TCTCCCACATGTCGTACTGGAGAATGCCC 192640 Query 114128 TGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC--GCCAAT-TCG 114184 | |||| | || |||||||| | |||||||| || | ||| ||| | |||| ||| Sbjct 192639 TTGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGGAC---CAAGTTCCTTGGCAATATCG 192583 Query 114185 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTG 114244 || || || || ||||| || || ||||| || || || || | |||| Sbjct 192582 CAGGACGAAGTCAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTG 192523 Query 114245 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304 |||| || ||| || || | || || | || |||| || ||||| || ||| Sbjct 192522 GCCTGGTTGGACTCGAAGGGCAGGCGCAGGGCGAGGAAAGCATCGGCCAGACCCTGTACA 192463 Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 114364 || | ||||| || || || | | || || || ||| ||||| || Sbjct 192462 CCCATACCAATAGGTCGGTGGCGGAAGTTGCTGCGGCGCGCCTCCTCAACGGGGTAGTGG 192403 Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 114424 || || |||| | | || | || |||||| || | || | || || |||||| Sbjct 192402 TTGACCTCAATAATCTTGTTCAAGTTGCGGGTGACGACTTGGGTAACCTCGTGCAGCTTT 192343 Query 114425 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 114484 | | ||||| || || | | |||| | ||| || |||| || ||||| Sbjct 192342 TGAAAGTCAAACTCGCCGCGCTTGTAGTCGACAAATGAAGGCAGAGCGAGCGAAGCCAGG 192283 Query 114485 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 114544 || || |||| | |||||| | |||||||||| | ||| || || || | || || Sbjct 192282 TTGCAGACAGCGACCTCATCAGGAGCAGTGTACTCGACAATCTCGGTGCAGAGGTTGGAG 192223 Query 114545 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGC 114604 || ||||||||||| |||||| || || ||| ||| || ||||||||||| ||| Sbjct 192222 CTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGC 192163 Query 114605 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGC 114663 || | || | || ||||| || || | || || ||||| | ||| | | || | ||| Sbjct 192162 ATAAAGGGGTTACCAGTCTCAGTCTGAGCCTCAAGGATAGCATACCACAGCTTCTG-GGC 192104 Query 114664 TGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTC 114723 | || || || | | | || |||||| | ||| || ||||| ||||| Sbjct 192103 GCGAACCGTCTCGCGGCCCTTGTTTTGCTTCTCGTAGCTCTCGTACAGCGCTTCGAACTC 192044 Query 114724 TTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACC 114783 || || | | || | || || || || | ||||| | || | ||| | || Sbjct 192043 GTCGCCGTAGACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGGGTCCAATCGCC 191984 Query 114784 ACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCG 114843 ||| | |||||||||||||| | ||| || ||||| ||||| |||||||||| || Sbjct 191983 GTTCTCTTGGACACGCTTCATGAACAAGTCGGGAATCCACAGAGCGTAGAAGAGATCGCG 191924 Query 114844 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 114903 |||| | || || | || || || |||| |||| ||| | | || ||| || Sbjct 191923 GGCGCGAACCTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAGGAAGCCAAAGACATCAGC 191864 Query 114904 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTT 114957 |||||| || || ||||| | || | | | ||| | || ||| |||||| Sbjct 191863 GTGCCATGGCTCAAGGTAGATGGC-AAAGGCACCT--GGGCGCTTGTTGCCACCCTGGTC 191807 Query 114958 TACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 115017 || || | || ||| || |||| || ||||| ||||||| ||| | ||| || Sbjct 191806 GACGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTTGATGTTCC 191747 Query 115018 ATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATA 115075 || || || | || || ||| | |||| | || |||| || | ||||||| Sbjct 191746 GTTGGTGCCGCCAATGTAGGAGCC--GGTGGCACGGATTCGGTGGACGTTGAGACCAATA 191689 Query 115076 CCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATC 115135 || || || ||| ||||| ||||| | |||| || ||||||| |||||||| Sbjct 191688 CCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTCGATG 191629 Query 115136 GAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCG 115195 ||| |||| | |||| ||||||||| ||||| || || |||||| || ||| Sbjct 191628 CTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCCTGCG 191569 Query 115196 TTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTC 115254 ||||| |||||||| | ||||| | || ||| ||| ||||| | ||||| ||||| Sbjct 191568 TTGAACAGGGTTGGCGAGGCGTGTGT-AAAGTACTTTTGCGACATGTAGTCGTAAGTCTC 191510 Query 115255 CAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTG 115314 | | | |||||| || ||||| || |||| | || ||||| | ||||| ||| Sbjct 191509 AATGGCCTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGCATGAGCATGTGTTG 191450 Query 115315 GGG 115317 || Sbjct 191449 TGG 191447 >seq403 Length=285126 Score = 143 bits (158), Expect = 3e-29 Identities = 311/459 (68%), Gaps = 20/459 (4%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816 |||||| ||||| ||||||||||||||||| ||||| || | |||| ||| ||||||| Sbjct 107404 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC-AAGCGAGATGTTCTCCA 107462 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCA--AATTG---TTGGC-ACCCCAATCTGTTTGA 125870 | || || || ||||| | | ||| | | ||| ||| | | ||| || Sbjct 107463 TGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGGGGTTGCCGAGAGCAAG------GA 107516 Query 125871 GGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGA 125930 | ||||| || | |||| |||||||||||| |||| | |||||| |||| | Sbjct 107517 GCAGACGGTCGGCGACGAACTCAATGTACTGGCACATGAGAGTGGCGTTCATGCCGAGAA 107576 Query 125931 GGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGA 125990 | || || |||||||| || |||| ||| |||||| || || ||||| | || Sbjct 107577 GAGCGCAAGGAAGCGCGTCGCTGAGGAACTCCTGCTCAATCTCGACAGCTTCGGTGATGA 107636 Query 125991 TGGCGTGAATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGG 126047 | || | | | || | || | | ||| | | || |||||| || Sbjct 107637 TAGCCTCGACAGCAGCCTTGCTGGGGCGGTTGTTGAGGAGAGA---GAAGAGCAGGCAGG 107693 Query 126048 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTG 126107 |||| || ||| | |||||||||||| |||||||| || || |||||| || || | Sbjct 107694 CAAAGTCGGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGG 107753 Query 126108 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTC 126167 |||||||||| ||||||||||||||||| || | |||||||| ||||||||| | Sbjct 107754 GCATGAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGAACCGCTGAAGAAGATAC 107813 Query 126168 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 |||| || || ||||| | ||||| | ||||||| Sbjct 107814 CCTCAACGGCGGCAAACGCGACAAGACGGTTGGCAAAGG 107852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350508695120