Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq225 89.7 5e-13
seq385 82.4 8e-11
>seq225
Length=197037
Score = 89.7 bits (98), Expect = 5e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | || || ||||| | || || || || ||||||||||| || |
Sbjct 138462 ACCACCGCGCAGGCGCAGGACGAGATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 138403
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || || || ||||| ||||| |||| || |||||||| || || ||
Sbjct 138402 CAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGG 138343
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || ||||| || || ||| || || | || || | || ||
Sbjct 138342 AATGCCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCGAC 138283
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTT 64429
||| | || | |||||||||||||| ||| ||
Sbjct 138282 TTCAAGCGTGATGGTCTTGCCGGTCACTGTTGTT 138249
>seq385
Length=1101030
Score = 82.4 bits (90), Expect = 8e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || |||||||| || | | |||||| |||| || || |||||||||
Sbjct 327371 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 327430
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|| | ||||| ||||||||||| || ||||| || || || ||| ||
Sbjct 327431 GCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTGGT 327478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499642214338160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |