Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq393 295 7e-75
>seq393
Length=255347
Score = 295 bits (326), Expect = 7e-75
Identities = 622/921 (68%), Gaps = 10/921 (1%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | | ||| | |||||| || || ||| ||| ||||||||| | |||||
Sbjct 191372 AACTACCAGTTCTTCGGCTTCAAGACGCTCGAGCGGTCCTACCTCCTCCGTGTAAATGGC 191431
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| ||||||| || || || |||| ||||| || ||| |||| || |||||| |
Sbjct 191432 AAGGTTGCCGAGCGCCCACAACACATGCTCATGCGAGTTGCCGTCGGCATACACGGCGAT 191491
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| || | | | ||| | ||||| | | ||| | ||| |||
Sbjct 191492 GACATTGAAAAGGCCATTGAGACTTACGACTACATGTCGCAAAAGTACTTTACACACGCC 191551
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| || |||||||||||||| || || || || |||||||| || || ||||| ||
Sbjct 191552 TCGCCAACCCTGTTCAACGCAGGCACACCATCACCCCAGATGTCCTCCTGCTTCCTCATC 191611
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||| |||| ||| || | ||||| |||||| || || ||
Sbjct 191612 GAC-ATGAAGGAAGACAGCATCGACGGCATCTACGACACACTCAAGACTTGCGCTTTGAT 191670
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||| || ||| || || || || ||| |||||| | ||||||| || |||||
Sbjct 191671 CTCCAAGACCGCTGGCGGTATTGGTCTCAACGTCCACCGAATCCGTGCCACCGGCTCCTA 191730
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
||| |||| ||||| || || || ||||| ||| | || |||||||| || | ||||||
Sbjct 191731 CATTGGCGGCACCAACGGAACATCAAACGGTCTCATTCCCATGCTCCGTGTATACAACAA 191790
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || |||||||| ||||||||||| | | | ||| | || || |||| ||
Sbjct 191791 CACCGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCT 191850
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||| |||||||| || || | ||| | |||||||| ||||||||||| || ||
Sbjct 191851 TGAGCCATGGCACGCTGATGTCTTTGGCTTCCTGGACCTGCGCAAGAACCACGGAAAGGA 191910
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | ||| | || |||||||||||||| ||| | || ||| | || ||||| ||
Sbjct 191911 GGAGGTTCGCGCCCGCGATCTCTTCTACGCTCTGTGGATTCCCGACTTGTTCATGAAGCG 191970
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
||| | | ||| || |||| || | || ||||| || || || || || ||||
Sbjct 191971 TGTCCAAGAGAACGGCGATTGGACCCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGA 192030
Query 94374 CGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432
|| | || || | || |||| |||| | | ||||| ||| ||||| |
Sbjct 192031 TGTCTACGGCGACGAG-TTCGAAGCGCTGTACGAGAGCTACGAGAAGCAAAACAAGGGCC 192089
Query 94433 G---GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489
| || |||| || |||||||||| || ||| | || | ||| ||||
Sbjct 192090 GCGAGACGGTT---CGCGCCCAGAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGA 192146
Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
| |||| |||| || | | |||||| || |||| |||| ||||||| || |||
Sbjct 192147 CTGGTAACCCCTTTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACC 192206
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
| || || ||||| || || |||||||||||||||||||| ||| |||| || |
Sbjct 192207 TGGGCACCATTCGCAGCTCCAACCTCTGCACCGAGATTGTCGAGTACACTGCTCCTGATG 192266
Query 94610 AGATTGCTGTGTGTAACCTGG 94630
|| | ||||| || |||||||
Sbjct 192267 AGGTCGCTGTCTGCAACCTGG 192287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720639807440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |