Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq393 295 7e-75 >seq393 Length=255347 Score = 295 bits (326), Expect = 7e-75 Identities = 622/921 (68%), Gaps = 10/921 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | | ||| | |||||| || || ||| ||| ||||||||| | ||||| Sbjct 191372 AACTACCAGTTCTTCGGCTTCAAGACGCTCGAGCGGTCCTACCTCCTCCGTGTAAATGGC 191431 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| ||||||| || || || |||| ||||| || ||| |||| || |||||| | Sbjct 191432 AAGGTTGCCGAGCGCCCACAACACATGCTCATGCGAGTTGCCGTCGGCATACACGGCGAT 191491 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| || | | | ||| | ||||| | | ||| | ||| ||| Sbjct 191492 GACATTGAAAAGGCCATTGAGACTTACGACTACATGTCGCAAAAGTACTTTACACACGCC 191551 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | || |||||||||||||| || || || || |||||||| || || ||||| || Sbjct 191552 TCGCCAACCCTGTTCAACGCAGGCACACCATCACCCCAGATGTCCTCCTGCTTCCTCATC 191611 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| |||| ||| || | ||||| |||||| || || || Sbjct 191612 GAC-ATGAAGGAAGACAGCATCGACGGCATCTACGACACACTCAAGACTTGCGCTTTGAT 191670 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || ||| || || || || ||| |||||| | ||||||| || ||||| Sbjct 191671 CTCCAAGACCGCTGGCGGTATTGGTCTCAACGTCCACCGAATCCGTGCCACCGGCTCCTA 191730 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| |||| ||||| || || || ||||| ||| | || |||||||| || | |||||| Sbjct 191731 CATTGGCGGCACCAACGGAACATCAAACGGTCTCATTCCCATGCTCCGTGTATACAACAA 191790 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || |||||||| ||||||||||| | | | ||| | || || |||| || Sbjct 191791 CACCGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCT 191850 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| |||||||| || || | ||| | |||||||| ||||||||||| || || Sbjct 191851 TGAGCCATGGCACGCTGATGTCTTTGGCTTCCTGGACCTGCGCAAGAACCACGGAAAGGA 191910 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | ||| | || |||||||||||||| ||| | || ||| | || ||||| || Sbjct 191911 GGAGGTTCGCGCCCGCGATCTCTTCTACGCTCTGTGGATTCCCGACTTGTTCATGAAGCG 191970 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 ||| | | ||| || |||| || | || ||||| || || || || || |||| Sbjct 191971 TGTCCAAGAGAACGGCGATTGGACCCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGA 192030 Query 94374 CGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 || | || || | || |||| |||| | | ||||| ||| ||||| | Sbjct 192031 TGTCTACGGCGACGAG-TTCGAAGCGCTGTACGAGAGCTACGAGAAGCAAAACAAGGGCC 192089 Query 94433 G---GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | || |||| || |||||||||| || ||| | || | ||| |||| Sbjct 192090 GCGAGACGGTT---CGCGCCCAGAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGA 192146 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | |||| |||| || | | |||||| || |||| |||| ||||||| || ||| Sbjct 192147 CTGGTAACCCCTTTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACC 192206 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || || ||||| || || |||||||||||||||||||| ||| |||| || | Sbjct 192207 TGGGCACCATTCGCAGCTCCAACCTCTGCACCGAGATTGTCGAGTACACTGCTCCTGATG 192266 Query 94610 AGATTGCTGTGTGTAACCTGG 94630 || | ||||| || ||||||| Sbjct 192267 AGGTCGCTGTCTGCAACCTGG 192287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720639807440