Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq393 226 3e-54
seq225 129 6e-25
seq403 127 2e-24
>seq393
Length=255347
Score = 226 bits (250), Expect = 3e-54
Identities = 722/1103 (65%), Gaps = 55/1103 (5%)
Strand=Plus/Minus
Query 153383 CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGAT 153442
|||| | |||| |||||| | || || |||||||||||||| | ||| | || ||
Sbjct 192511 CTCGAAGGGCAGGCGCAGGGCGAGGAAAGCATCGGCCAGACCCTGTACACCCATACCAAT 192452
Query 153443 GGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGAT 153502
||||| || ||||||||| | ||| | | | ||| ||||| ||| || ||
Sbjct 192451 AGGTCGGTGGCGGAAGTTGCTGCGGCGCGCCTCCTCAACGGGGTAGTGGTTGACCTCAAT 192392
Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562
||| ||||| | |||||| || |||| || | | | | || || | || ||| |
Sbjct 192391 AATCTTGTTCAAGTTGCGGGTGACGACTTGGGTAACCTCGTGCAGCTTTTGAAAGTCAAA 192332
Query 153563 GGTCATTTCGTCGACGC--GTACGCATCGATTCACGGCA-----ATAGACGCCAGATTAC 153615
||| || ||| ||| | | | | | |||| | || ||||| || |
Sbjct 192331 C------TCGCCG-CGCTTGTAGTCGACAAATGAAGGCAGAGCGAGCGAAGCCAGGTTGC 192279
Query 153616 AGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATT 153675
|||| || ||| || | | |||||| || ||||||| |||||||||| ||
Sbjct 192278 AGACAGCGACCTCATCAGGAGCAGTGTACTCGACAATCTCGGTGCAGAGGTTGGAGCTGC 192219
Query 153676 TTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGT 153735
||| ||||| || | ||| ||||| ||||| ||||| || || ||| |||||||
Sbjct 192218 GAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAA 192159
Query 153736 ACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATG-CAGGTCCTGCGCTCGC 153794
| || || ||||| || | || | |||| | || ||| | ||| || ||
Sbjct 192158 AGGGGTTACCAGTCTCAGTCTGAGCCTCAAGGATAG-CATACCACAGCTTCTGGGCGCGA 192100
Query 153795 ACCCGCTGCCGATAGCGGCCCTCGCT------CTCGTATCGCTCGTACAGTCGCT-CAAA 153847
||| || |||||||| | | |||||| | ||||||||| |||| | ||
Sbjct 192099 ACCGTCTC------GCGGCCCTTGTTTTGCTTCTCGTAGCTCTCGTACAG-CGCTTCGAA 192047
Query 153848 CTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACAT 153907
||||||||||||| ||||| || || || |||| | || |||||||| | |||
Sbjct 192046 CTCGTCGCCGTAGACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGGGTCCA--- 191990
Query 153908 ATCGTCGG---CGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAG 153964
|||| || | | ||| || |||||||| || || | ||| || ||||| | |||
Sbjct 191989 ATCGCCGTTCTCTTGGACACGCTTCATGAACAAGTCGGGAATCCACAGAGCGTAGAAGAG 191930
Query 153965 GTCGCGCGCCTTGCAATCCTCCGCGC--CCATG----TTGCGTTTCAGATTGAGCACGCT 154018
||||| || || | ||||| | || || ||||| ||| | || | ||
Sbjct 191929 ATCGCGGGC---GCGAACCTCCTCCTTTCCGTGGTTCTTGCG---CAGGTCCAGGAAGCC 191876
Query 154019 ATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CC 154075
| ||| || |||||||| || |||| ||||| ||| | ||||||| ||||| ||
Sbjct 191875 AAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCC 191816
Query 154076 GCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCT 154135
||||| ||||||| ||| | | |||||| | || || | |||||| || ||| |
Sbjct 191815 ACCCTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTT 191756
Query 154136 TGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAAC 154195
|| || |||||||| || | | |||| ||| || | | | || ||||| |
Sbjct 191755 TGATGTTCCGTTGGTGCCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTGGACGTTGAG 191696
Query 154196 GCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCA-GTCGCCCAGCGTCCTGTAGATGC 154254
||||| ||||| || ||| || || |||||| ||| || || ||||||||
Sbjct 191695 ACCAATACCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTG-AGTGTGTCGTAGATGC 191637
Query 154255 CGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA-ATGCGC 154313
|||||||||| || || | | ||| | ||| || || |||| || || ||| |
Sbjct 191636 CGTCGATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATG-GT 191578
Query 154314 GTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGG 154373
|| || || || ||||| || ||||| ||||| ||||| ||| | |
Sbjct 191577 GTGCCTGCGTTGAACAGGGTTGGCGAGGCGTGTGTAAAGTACTTTTGCGACATGTAGTCG 191518
Query 154374 TACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGC 154433
|| || || ||||| | ||| || ||||||||||| ||||||| || || |||||||||
Sbjct 191517 TAAGTCTCAATGGCCTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGCATGAGC 191458
Query 154434 ATGTGCTGCGGACGTTCGGCGAC 154456
||||| || || || ||||| ||
Sbjct 191457 ATGTGTTGTGGGCGCTCGGCAAC 191435
>seq225
Length=197037
Score = 129 bits (142), Expect = 6e-25
Identities = 168/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || | ||| | | | |||||||| || |||||||||||||||
Sbjct 138689 CCACCACGGAGACGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 138630
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| ||| ||||| || ||||| | |||| ||||||||||||||||||||
Sbjct 138629 AGAGTACGGCCGTCTTCGAGCTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAGGG 138570
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
||||| || ||||| ||| | || | || |||| || | ||||| | ||||| |
Sbjct 138569 ATACCCTCCTTGTC-CTGAATCTTGGACTTGACATTG-TCAATCGTGTCTGAAGACTCAA 138512
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | ||| | || || |||||||| || || || || ||||||||
Sbjct 138511 CTTCCAACGTGATAGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 138463
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || ||||| | | |||||||| || |||||||||||
Sbjct 138917 CCACCACGTAGACGGAGCACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCTGAG 138858
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||| || ||||| ||||| | | |||| ||||| || |||||||||||
Sbjct 138857 AGGGTCCGTCCGTCTTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGG 138798
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || |||| | || | ||||||| | || ||||||
Sbjct 138797 ATGCCCTCCTTGTCTTGGATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTCCACC 138738
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || || || ||||| || || || || |||||
Sbjct 138737 TCCAAGGTGATGGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 138691
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| |||| || | ||| | | | |||||||| ||||||||||||||| |
Sbjct 138461 CCACCGCGCAGGCGCAGGACGAGATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 138402
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||||||||| || |||| | || || ||||| || ||||| ||
Sbjct 138401 AGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGA 138342
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| ||| | || | || | ||| || | |||||||| |||||| |
Sbjct 138341 ATGCCCTCCTTGTC-TTGAATCTTCGACTTGACGTTG-TCAATGGTGTCGGACGACTCGA 138284
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||| | || || || |||| ||| ||
Sbjct 138283 CTTCAAGCGTGATGGTCTTGCCGGTCACTGTTGTT 138249
>seq403
Length=285126
Score = 127 bits (140), Expect = 2e-24
Identities = 251/366 (69%), Gaps = 23/366 (6%)
Strand=Plus/Minus
Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541
|||||||| || || ||| ||||||| | || || || ||||| || ||||||| |||
Sbjct 107757 ATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTATGCACACCGAC 107698
Query 52542 TTTGCGTGCCT---CTACTA------CAAGACGCGCGTGACCGAAAAATTGGATTCGGAC 52592
||||| ||||| || || ||| | ||| || | || || | | | |
Sbjct 107697 TTTGCCTGCCTGCTCTTCTCTCTCCTCAACAACCGC----CCCAGCAA--GGCTGCTGTC 107644
Query 52593 ACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCG 52652
|| || || ||| || || || | || || ||||||| | | | ||||
Sbjct 107643 --GAGGCT----ATCATCACCGAAGCTGTCGAGATTGAGCAGGAGTTCCTCAGCGACGCG 107590
Query 52653 CTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC-CATGTGCGAGTACATCGAGTTTGT 52711
|| || || || || ||||||||||| || || ||||||| ||||||| ||||| ||
Sbjct 107589 CTTCCTTGCGCTCTTCTCGGCATGAACGC-CACTCTCATGTGCCAGTACATTGAGTTCGT 107531
Query 52712 GGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTT 52771
|| || |||||| | | ||||| | || ||||||| |||||| ||| || ||
Sbjct 107530 CGCCGACCGTCTGCTCCTTGCTCTCGGCAACCCCAAGTACTACAACGCCACCAACCCCTT 107471
Query 52772 TGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGG 52831
|| || ||| | ||||| ||||||| |||||||||||||| ||||||||||| || ||
Sbjct 107470 CGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGG 107411
Query 52832 CGAGTA 52837
|| ||
Sbjct 107410 TGACTA 107405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496259831842080
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