Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq225 86.0 4e-12
>seq225
Length=197037
Score = 86.0 bits (94), Expect = 4e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| ||||| || || || || |||||||| ||||| ||| | | ||||||| | ||
Sbjct 138666 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCGAGCTG 138607
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|| |||||| | || | |||||||||||| || || || |||||||| ||| ||
Sbjct 138606 CTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTT 138547
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || ||| | || || || || | || || || || || || || || || ||
Sbjct 138546 GGACTTGACATTGTCAATCGTGTCTGAAGACTCAACTTCCAACGTGATAGTCTTGCCAGT 138487
Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177
||| || || || || || ||||||
Sbjct 138486 CAGGGTCTTGACGAAGATCTGCATA 138462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357390196733990
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |