Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq393 154 1e-32 seq225 105 6e-18 >seq393 Length=255347 Score = 154 bits (170), Expect = 1e-32 Identities = 913/1447 (63%), Gaps = 47/1447 (3%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 ||||| ||||| || ||||| ||||||||||| || || | ||| | ||||| Sbjct 191432 AAGGTTGCCGAGCGCCCACAACACATGCTCATGCGAGTTGCCGTCGGCATACACGGCGAT 191491 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 ||||| ||||| || | || |||||||| | ||||| ||||| | || || ||||| Sbjct 191492 GACATTGAAAAGGCCATTGAGACTTACGACTACATGTCGCAAAAGTACTTTACACACGCC 191551 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 || || ||||| ||| ||||| | || ||| |||| || || || | || Sbjct 191552 TCGCCAACCCTGTTCAACGCAGGCACACCATCACCCCAGATGTCCTCCTGCTTCCTCATC 191611 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGA-TTGCGCGTTGAT 123136 | || |||||||||||| ||| ||||| || || | | || |||||| ||||| Sbjct 191612 GACATGAAGGAAGACAGCATCGACGGCATCTACGACACACT-CAAGACTTGCGCTTTGAT 191670 Query 123137 TTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCG 123196 ||||| | ||||| || || | ||||| ||| | | | | ||| | Sbjct 191671 CTCCAAGACCGCTGGCGGTATTGGTCTCAACGTCCACCGAATCCGTGCCACCGGCTCCTA 191730 Query 123197 CATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAA 123256 ||| | ||||| |||||| | ||| ||| ||||||| || || ||||| || Sbjct 191731 CATTGGCGGCACCAACGGAACATCAAACGGTCTCATTCCCATGCTCCGTGTATACAACAA 191790 Query 123257 CGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTATCT 123313 | ||| || ||||||||||||| || ||| ||| ||| || | || ||||| || Sbjct 191791 CACCGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCT 191850 Query 123314 AGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGC---AACATGGGGGC 123370 || || ||||||| |||||| | | || | | | ||| ||| || Sbjct 191851 TGAGCCATGGCACGCTGATGTCTTTGGCTTCCTGGACCT---GCGCAAGAACCACGGAAA 191907 Query 123371 GGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCG 123430 ||| || ||||||||| | || |||||| | ||| | ||||| ||||| ||| Sbjct 191908 GGAGGAGGTTCGCGCCCGCGATCTCTTCTACGCTCTGTGGATTCCCGACTTGTTCATGAA 191967 Query 123431 ACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGG-CTTGA 123489 || || |||| |||||| ||| | || ||||| ||| | ||| || || |||| Sbjct 191968 GCGTGTCCAAGAGAACGGCGATTGGACCCTGATGTGCCCCAACGAGTGCCCTGGTCTTG- 192026 Query 123490 GCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAAC 123549 ||| || |||||| | |||| || | | |||||| | ||||| |||| |||| Sbjct 192027 CCGATGTCTACGGCGACGAGTTCGAAGCGCTGTACGAGAGCTACGA----GAAGCAAAAC 192082 Query 123550 -AGGTTAGTCA---GGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTC 123605 ||| | | ||||| || | | ||| | ||| | || | || Sbjct 192083 AAGGGCCGCGAGACGGTTCGCGCCCAGAAGCTGTGGTATGCTATCCTTGAGGCTCAGACT 192142 Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 || || || | || | ||||||||||| || || |||||| | || | ||| |||| Sbjct 192143 GAGACTGGTAACCCCTTTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAG 192202 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCC 123725 ||| |||| || || | || || ||| |||| ||| |||| |||| | | | Sbjct 192203 AACCTGGGCACCATTCGCAGCTCCAACCTCTGCACCGAGATTGTCGAGTACACTGCTCCT 192262 Query 123726 GATCAAGTGGCCGTGTGTAATTTGGCT----TCGATTTGCGTGAATCGTTG-CGTCGAAA 123780 ||| | || || || || || ||||| ||| | ||| | || ||| || | | | Sbjct 192263 GATGAGGTCGCTGTCTGCAACCTGGCTTCGCTCGCTCTGCCTTCAT--TTGTCGACTACA 192320 Query 123781 A---CGGCGCTTTTAATTTCCAAACGCT-CAAACGCATAACAAAAACTGTAGTAA---AG 123833 | ||||| ||| | || |||| ||| || | || | || || || | Sbjct 192321 AGCGCGGCGAGTTTGACTTTCAAAAGCTGCACGAGGTTACCCAA----GTCGTCACCCGC 192376 Query 123834 AATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAAT 123893 || |||||||| ||||| || || || || || | ||||| ||||| || Sbjct 192377 AACTTGAACAAGATTATTGAGGTCAACCACTACCCCGTTGAGGAGGCGCGCCGCAGCAAC 192436 Query 123894 TTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTG 123953 || ||| |||| | || |||| | || || ||||||| || || | ||| Sbjct 192437 TTCCGCCACCGACCTATTGGTATGGGTGTACAGGGTCTGGCCGATGCTTTCCTCGCCCTG 192496 Query 123954 CGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATT 124013 ||| |||| | ||| | || | || ||| ||| || | || || ||| || || Sbjct 192497 CGCCTGCCCTTCGAGTCCAACCAGGCCAAGAAGCTCAACATTCAGATCTTCGAGACCATC 192556 Query 124014 TATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGT 124073 || ||| |||| || || |||||| |||| || | || | ||||| | Sbjct 192557 TACCACGCCGCTCTGACTTCGTCCTGCGATATTGCCAAGGAACTTGGTCCTTACGAGACC 192616 Query 124074 TACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCG 124133 |||| ||| || | | || ||| | ||||||||||||||| | || || Sbjct 192617 TACGAGGGATCTCCTGTCTCCAAGGGCATTCTCCAGTACGACATGTGGGAGAAGACCCCT 192676 Query 124134 ACAAATTTGTGGGACTG----GAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCG 124189 || || | |||||||| |||| | || | | | || | ||||||| | || Sbjct 192677 ACCGATCTCTGGGACTGGGATGAGC---TCAAGGCCAAG-ATTGCCCAGCACGGTGTCCG 192732 Query 124190 TAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAA 124249 ||||||||| | | || |||||| || || |||| | || ||| | |||||||| Sbjct 192733 CAACTCGCTGCTCATCGCACCCATGCCAACTGCCTCCACCTCGCAGATTCTCGGAAACAA 192792 Query 124250 CGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTT 124309 ||| | ||||||||| | |||| ||| | ||| || || ||| | || || || || Sbjct 192793 CGAGTGCTTCGAGCCATACACTTCCAACATTTACTCTCGCCGTGTGCTCGCTGGTGAGTT 192852 Query 124310 TCAAGTG 124316 || ||| Sbjct 192853 CCAGGTG 192859 >seq225 Length=197037 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | || || |||||||| || || ||||| || || || || ||| Sbjct 138464 ATACCACCGCGCAGGCGCAGGACGAGATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCG 138405 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | ||| ||||| ||| | |||| || ||||| ||||| Sbjct 138404 GACAGGGTGCGGCCATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGG 138345 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| || || |||||||| || |||| || | || | ||||||||| ||||| Sbjct 138344 GGAATGCCCTCCTTGTCTTGAATCTTCGACTTGA-CGTTGTCAATGGTGTCGGACGACTC 138286 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||||| || || | || |||||||| Sbjct 138285 GACTTCAAGCGTGATGGTCTTGCCGGT 138259 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| ||||| | | || |||||||| || || ||||| ||||| || || ||| Sbjct 138181 ATACCTCCACGGAGGCGGAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 138122 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | ||||| ||||||||||| || Sbjct 138121 GACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGGTCTGGG 138062 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||| || || || ||||| || |||| || | ||||||||||||||| Sbjct 138061 GGAATGCCCTCCTTGTCCTGAATCTTGCTCTTGACATTGTCGATGGTGTCGGAAGACTCC 138002 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGT 45316 || || || || | ||| |||||||| Sbjct 138001 ACCTCAAGGGTGATCGTCTTGCCGGT 137976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000860883440