Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq393 268 1e-66 seq403 154 2e-32 >seq393 Length=255347 Score = 268 bits (296), Expect = 1e-66 Identities = 1113/1738 (64%), Gaps = 31/1738 (2%) Strand=Plus/Minus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| |||||||| || || ||||||| || | ||||| || | Sbjct 193170 CGGAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCATCCAGCAAAGTGCATCGACGTG 193111 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | || || | |||| || ||||| ||||| || ||||| ||| Sbjct 193110 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTCAACGACTGGGACTGGTCGATAAAG 193051 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAGTTC 115735 || || || || ||||| || || | | || | | ||||||||| ||||| Sbjct 193050 GCACCACGGTCGGCAGCCATCTCGATGA--TTCTGCGCTGCGAGATTTCCCAAACAGTCT 192993 Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCT 115795 |||| || | ||| | ||||| ||||||| || | || || ||||| | Sbjct 192992 TGTAAAGCTCCTTGGTCTCATCGGGGATATTGGGAATTCGTGCAATGGAACCACCCTCGG 192933 Query 115796 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGA 115855 || ||| | | |||||| | || ||||| || || || | || |||| | | Sbjct 192932 CGATGATGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACAAGGTCCTTGAGCA 192873 Query 115856 GGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTC 115914 | ||||| || |||||||| ||||| || | ||| || ||||||| Sbjct 192872 GCCATGGGTTGACCACCTGGAACTCACCAGCGAGCACACGGCG-AGAGTAAATGTTGGAA 192814 Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 115974 ||||||||||| |||||||| ||||| || | || || | |||||||| || |||||| Sbjct 192813 GTGTATGGCTCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTGGCATG 192754 Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCC 116034 ||||| ||||| || |||||||| ||| | ||| ||||||| | ||| Sbjct 192753 GGTGCGATGAGCAGCGAGTTGCGGACACCGTGCTGGGCAATCTTGGCCTTGAGCTCATCC 192694 Query 116035 CAGTCGTAGTTGAGCTTT----GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTG 116090 ||||| || || | | |||| | |||||||| || ||||||| || || | Sbjct 192693 CAGTCCCAGA-GATCGGTAGGGGTCTTC---TCCCACATGTCGTACTGGAGAATGCCCTT 192638 Query 116091 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC--GCCAAT-TCGGA 116147 ||| | || |||||||| | ||||| || || || || ||| | |||| ||| | Sbjct 192637 GGAGACAGGAGATCCCTCGTAGGTCTCGTAAGGACC---AAGTTCCTTGGCAATATCGCA 192581 Query 116148 GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGC 116207 | || || || ||||| || || ||||| || || || || | |||||| Sbjct 192580 GGACGAAGTCAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGC 192521 Query 116208 CTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACC 116267 || || ||| || || | || || | || |||| || ||||| || ||||| Sbjct 192520 CTGGTTGGACTCGAAGGGCAGGCGCAGGGCGAGGAAAGCATCGGCCAGACCCTGTACACC 192461 Query 116268 GAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATT 116327 | ||||| || || || | | || || || ||| ||||| || || Sbjct 192460 CATACCAATAGGTCGGTGGCGGAAGTTGCTGCGGCGCGCCTCCTCAACGGGGTAGTGGTT 192401 Query 116328 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 || |||| | | || | || |||||| || | || | || || ||||||| Sbjct 192400 GACCTCAATAATCTTGTTCAAGTTGCGGGTGACGACTTGGGTAACCTCGTGCAGCTTTTG 192341 Query 116388 GTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATT 116447 | ||||| || || | | |||| | ||| || |||| || ||||| || Sbjct 192340 AAAGTCAAACTCGCCGCGCTTGTAGTCGACAAATGAAGGCAGAGCGAGCGAAGCCAGGTT 192281 Query 116448 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACT 116507 || |||| | |||||| | |||||||||| | ||| || || || | || || || Sbjct 192280 GCAGACAGCGACCTCATCAGGAGCAGTGTACTCGACAATCTCGGTGCAGAGGTTGGAGCT 192221 Query 116508 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCAT 116567 ||||||||||| |||||| || || ||| ||| || ||||||||||||||||| Sbjct 192220 GCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCAT 192161 Query 116568 ATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTG 116626 | | || | || ||||| || || | || || ||||| | ||| | | || | ||| Sbjct 192160 AAAGGGGTTACCAGTCTCAGTCTGAGCCTCAAGGATAGCATACCACAGCTTCTG-GGCGC 192102 Query 116627 GCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTT 116686 | || || || | | | || |||||| | ||| || || || ||||| | Sbjct 192101 GAACCGTCTCGCGGCCCTTGTTTTGCTTCTCGTAGCTCTCGTACAGCGCTTCGAACTCGT 192042 Query 116687 CACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCAC 116746 | || | || | || || || || | || || | || | ||| | || Sbjct 192041 CGCCGTAGACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGGGTCCAATCGCCGT 191982 Query 116747 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGAC 116806 ||| | || ||||||||||| | ||| || ||||| || || |||||||||| || Sbjct 191981 TCTCTTGGACACGCTTCATGAACAAGTCGGGAATCCACAGAGCGTAGAAGAGATCGCGGG 191922 Query 116807 AGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGT 116866 |||| | || || | || || || |||| |||| ||| | | || ||| |||| Sbjct 191921 CGCGAACCTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAGGAAGCCAAAGACATCAGCGT 191862 Query 116867 GCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACGA---CCAGCCTGGTTTACAT 116923 |||| || || ||||| | || | | || ||| ||| |||||| || | Sbjct 191861 GCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGT 191802 Query 116924 ACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTG 116983 | | || || ||| |||| || ||||| ||||||| ||| | ||| || || | Sbjct 191801 AGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTTGATGTTCCGTTGG 191742 Query 116984 TCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCC 117041 | || | ||| | ||| | | |||| | || ||||| || | ||||||||| || Sbjct 191741 TGCCGCCAATGTAGGAGCC--GGTGGCACGGATTCGGTGGACGTTGAGACCAATACCGCC 191684 Query 117042 TGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC 117101 || ||| ||||| ||||| | |||| || ||||||| || ||||| ||| Sbjct 191683 AGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTCGATGCTGTC 191624 Query 117102 ACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAA 117161 |||| | |||||||||||||| ||||| || || |||||| || |||||||| Sbjct 191623 TTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCCTGCGTTGAA 191564 Query 117162 GAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGA 117220 |||||||| | ||||| | || ||| ||| ||||| | ||||| ||||| | | Sbjct 191563 CAGGGTTGGCGAGGCGTGTGT-AAAGTACTTTTGCGACATGTAGTCGTAAGTCTCAATGG 191505 Query 117221 CAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278 | |||||| || ||||| || |||| | || ||||| | ||||| ||| || Sbjct 191504 CCTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGCATGAGCATGTGTTGTGG 191447 >seq403 Length=285126 Score = 154 bits (170), Expect = 2e-32 Identities = 315/461 (68%), Gaps = 24/461 (5%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || ||||||||||||||||| ||||| ||| | || ||| |||||||| Sbjct 107404 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCAT 107463 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTG---TTGGC-ACCCCAATCTGTTTGAG 127344 || || || ||||| | | ||| | | ||| ||| | | ||| ||| Sbjct 107464 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGGGGTTGCCGAGAGCAAG------GAG 107517 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 ||||| || | |||| |||||||||||| |||| | |||||| |||| || Sbjct 107518 CAGACGGTCGGCGACGAACTCAATGTACTGGCACATGAGAGTGGCGTTCATGCCGAGAAG 107577 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 || || |||||||| || |||| ||| |||||| || |||||||| | ||| Sbjct 107578 AGCGCAAGGAAGCGCGTCGCTGAGGAACTCCTGCTCAATCTCGACAGCTTCGGTGATGAT 107637 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTC---TATTGCGTAAAGTCTTGAAGAGTTCCA--CA 127519 || | | || || | || | | ||| | | || |||||| || || Sbjct 107638 AGCCTCGACAGCAGCCTTGCTGGGGCGGTTGTTGAGGAGAGA---GAAGAG---CAGGCA 107691 Query 127520 G-CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 | |||| || ||| | |||||||||||| |||||||| || || |||||| ||||| Sbjct 107692 GGCAAAGTCGGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACC 107751 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||||||||| ||||||||||||||||| || | ||||| || ||||||||| Sbjct 107752 GGGCATGAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGAACCGCTGAAGAAGAT 107811 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 ||||| || || ||||| | ||||| | |||||||| Sbjct 107812 ACCCTCAACGGCGGCAAACGCGACAAGACGGTTGGCAAAGG 107852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504025100240