Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq403 152 8e-32
seq393 109 9e-19
>seq403
Length=285126
Score = 152 bits (168), Expect = 8e-32
Identities = 335/499 (67%), Gaps = 11/499 (2%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| | | || || |||||||| |||| |||||
Sbjct 107419 CTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCGAAGGGGTT 107478
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| ||| ||| ||| || |||||||| |||| | ||| || || || ||
Sbjct 107479 GGTGGCGTTGTAGTACTTGGGGTTGCCGAGAGCAAGGAGCAGACGGTCGGCGACGAACTC 107538
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG--CCTAACGGGGAGCGCTTCC 159826
||||| ||||| | ||| || || || || | || || ||||| ||
Sbjct 107539 AATGTACTGGCACATGAGAGTGGCGTTCATGCCGAGAAGAGCGCAA--GGAAGCGCGTCG 107596
Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTAC 159886
|| ||||||| |||||||||||| |||||||| | || | |||| | |
Sbjct 107597 CTGAGGAACTCCTGCTCAATCTCGACAGCTTCGGTGATGATAGCCTCGACA-----GCAG 107651
Query 159887 CCCGGCTTGCCCAAAA--TGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944
|| ||| | | || || || || ||||| ||||||||| ||||| |
Sbjct 107652 CCTTGCTGGGGCGGTTGTTGAGGAGAGAGAAGAGCAGGCAGGCAAAGTCGGTGTGCATAC 107711
Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004
||||||| |||||||||| ||||||||| | | | || || ||||||| |||||| |
Sbjct 107712 CCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATGAGACCACGCTTCT 107771
Query 160005 TGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACG 160064
| | ||| || |||| || || | |||||| || ||||| ||||| ||||| |||||||
Sbjct 107772 TCAACCAGAAGATGGAGGCGAATGAACCGCTGAAGAAGATACCCTCAACGGCGGCAAACG 107831
Query 160065 CCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAG 160124
| || || | | |||| | || ||| ||||| | |||| | ||||| ||||
Sbjct 107832 CGACAAGACGGTTGGCAAAGGTGGAGTTCTTGTCAGAGATCCATCGAAGAGCCCAATCAG 107891
Query 160125 CCTTCTTTGCGATGCACGG 160143
||||||| |||||| ||
Sbjct 107892 CCTTCTTGCGGATGCAGGG 107910
>seq393
Length=255347
Score = 109 bits (120), Expect = 9e-19
Identities = 294/439 (67%), Gaps = 12/439 (3%)
Strand=Plus/Minus
Query 205072 GTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATTTTTTGGGACA 205131
||||||||| | || || ||||| || || || || || || | ||||| ||
Sbjct 192061 GTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACCAGGGCACTCGTTGGGGCA 192002
Query 205132 CATCAGAGACCACATCT--GATCGTCTTTCACCCTCTCCATAAACAGGTCGCTGATCCAC 205189
|||||| | ||| ||| | || |||| || | || ||| |||| |||| ||||||
Sbjct 192001 CATCAGGGTCCA-ATCGCCGTTC-TCTTGGACACGCTTCATGAACAAGTCGGGAATCCAC 191944
Query 205190 AGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCC 205249
|| |||| || ||||| ||||| | || | || | ||| ||||||| || ||||
Sbjct 191943 AGAGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTTCCGTGGTTCTTGCGCAGGTCC 191884
Query 205250 AGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCT 205308
|| ||||| | | || |||||||| ||||| | | | ||| | || ||||| |
Sbjct 191883 AGG-AAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCG 191825
Query 205309 CTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCAC 205368
|||||| ||||||||||| || ||||| | |||| | || || ||||| || |
Sbjct 191824 CTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAAT 191765
Query 205369 CAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCTCA--CGTTG 205426
|||||||| | || ||||| |||| | ||| ||||| || | | || ||
Sbjct 191764 GAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTG 191705
Query 205427 GAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGC-ACTCTTGCAGAGT 205485
|| | | ||||| ||||||| ||||| |||| |||| | ||||| || ||
Sbjct 191704 GACGTTG--AGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTG-AGTGT 191648
Query 205486 GCTGTAGATGCCTGCGATG 205504
| ||||||||| |||||
Sbjct 191647 GTCGTAGATGCCGTCGATG 191629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795151085071840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |