Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq403 152 8e-32 seq393 109 9e-19 >seq403 Length=285126 Score = 152 bits (168), Expect = 8e-32 Identities = 335/499 (67%), Gaps = 11/499 (2%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| | | || || |||||||| |||| ||||| Sbjct 107419 CTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATGAAGTCGAAGGGGTT 107478 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| ||| || |||||||| |||| | ||| || || || || Sbjct 107479 GGTGGCGTTGTAGTACTTGGGGTTGCCGAGAGCAAGGAGCAGACGGTCGGCGACGAACTC 107538 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG--CCTAACGGGGAGCGCTTCC 159826 ||||| ||||| | ||| || || || || | || || ||||| || Sbjct 107539 AATGTACTGGCACATGAGAGTGGCGTTCATGCCGAGAAGAGCGCAA--GGAAGCGCGTCG 107596 Query 159827 GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTAC 159886 || ||||||| |||||||||||| |||||||| | || | |||| | | Sbjct 107597 CTGAGGAACTCCTGCTCAATCTCGACAGCTTCGGTGATGATAGCCTCGACA-----GCAG 107651 Query 159887 CCCGGCTTGCCCAAAA--TGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944 || ||| | | || || || || ||||| ||||||||| ||||| | Sbjct 107652 CCTTGCTGGGGCGGTTGTTGAGGAGAGAGAAGAGCAGGCAGGCAAAGTCGGTGTGCATAC 107711 Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004 ||||||| |||||||||| ||||||||| | | | || || ||||||| |||||| | Sbjct 107712 CCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATGAGACCACGCTTCT 107771 Query 160005 TGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACG 160064 | | ||| || |||| || || | |||||| || ||||| ||||| ||||| ||||||| Sbjct 107772 TCAACCAGAAGATGGAGGCGAATGAACCGCTGAAGAAGATACCCTCAACGGCGGCAAACG 107831 Query 160065 CCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAG 160124 | || || | | |||| | || ||| ||||| | |||| | ||||| |||| Sbjct 107832 CGACAAGACGGTTGGCAAAGGTGGAGTTCTTGTCAGAGATCCATCGAAGAGCCCAATCAG 107891 Query 160125 CCTTCTTTGCGATGCACGG 160143 ||||||| |||||| || Sbjct 107892 CCTTCTTGCGGATGCAGGG 107910 >seq393 Length=255347 Score = 109 bits (120), Expect = 9e-19 Identities = 294/439 (67%), Gaps = 12/439 (3%) Strand=Plus/Minus Query 205072 GTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATTTTTTGGGACA 205131 ||||||||| | || || ||||| || || || || || || | ||||| || Sbjct 192061 GTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACCAGGGCACTCGTTGGGGCA 192002 Query 205132 CATCAGAGACCACATCT--GATCGTCTTTCACCCTCTCCATAAACAGGTCGCTGATCCAC 205189 |||||| | ||| ||| | || |||| || | || ||| |||| |||| |||||| Sbjct 192001 CATCAGGGTCCA-ATCGCCGTTC-TCTTGGACACGCTTCATGAACAAGTCGGGAATCCAC 191944 Query 205190 AGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCC 205249 || |||| || ||||| ||||| | || | || | ||| ||||||| || |||| Sbjct 191943 AGAGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTTCCGTGGTTCTTGCGCAGGTCC 191884 Query 205250 AGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCT 205308 || ||||| | | || |||||||| ||||| | | | ||| | || ||||| | Sbjct 191883 AGG-AAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCG 191825 Query 205309 CTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCAC 205368 |||||| ||||||||||| || ||||| | |||| | || || ||||| || | Sbjct 191824 CTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAAT 191765 Query 205369 CAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCTCA--CGTTG 205426 |||||||| | || ||||| |||| | ||| ||||| || | | || || Sbjct 191764 GAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTG 191705 Query 205427 GAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGC-ACTCTTGCAGAGT 205485 || | | ||||| ||||||| ||||| |||| |||| | ||||| || || Sbjct 191704 GACGTTG--AGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTG-AGTGT 191648 Query 205486 GCTGTAGATGCCTGCGATG 205504 | ||||||||| ||||| Sbjct 191647 GTCGTAGATGCCGTCGATG 191629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795151085071840