Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq296 282 5e-71 seq194 136 5e-27 seq171 118 1e-21 seq393 109 7e-19 >seq296 Length=470551 Score = 282 bits (312), Expect = 5e-71 Identities = 489/705 (69%), Gaps = 8/705 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || | ||||| || |||||||| Sbjct 440569 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCC 440510 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | ||||| | || | || ||||| || ||||||||||||| ||| || ||||| ||| Sbjct 440509 TCCTCAATAGTCAAGAGGGAGACATCGAAGGTACCACCACCCAAGTCGAAGATGAGGACG 440450 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | | | ||||| || |||||||| || || || || || || || || Sbjct 440449 TTGCGCTCACCCTGGGTCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCGGTGGGCTCG 440390 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| ||||| ||||| | ||||| || || || || ||| Sbjct 440389 TTGATGATACGGAGGACGTTGAGGCCGGCAATCAAACCAGCATCCTTGGTAGCCTGACGT 440330 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || || || |||| | || | |||||| Sbjct 440329 TGAGAGTCGTTGAAGTAGGCAGGGACAGTGACAACAGCGTTGTTAACGGTGCCACCGAGG 440270 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | || |||| |||||||| ||||| ||||| ||||| || | | Sbjct 440269 TAGGACTCAGCAGTTTCCCTCATCTTGGTAAGGACCATGGATGAGATCTCCTCTGGGGTG 440210 Query 7817 AACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 || ||| ||| || || || || || || | || | || || |||| | | Sbjct 440209 AA-TGTCTTCTCCTCGCCCTTGAACTCGACCTGGATGACTGGCTT-GCCGC--CCTTGTC 440154 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 || ||||| | | | | ||||| ||| | || |||| ||| || | ||||| | Sbjct 440153 GACGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGAACCTCTTGATCGGCGAACTTGCG 440094 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| || |||||||| || || || ||||| |||||||||||| ||||||||| Sbjct 440093 GCCGATGAGGCGCTTTGCGTCGAAGACAGTGTTGACGGGGTTCATGGCGACTTGGTTCTT 440034 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 ||| | ||| || || ||||| || | || || || || ||| | || || || || Sbjct 440033 CGCAGAGTCACCAATCAGACGCTC---GGTGTCTGTGAAGGCAACGAAAGAGGGTGTTGT 439977 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || |||||||| || || ||||| | ||||||| | ||| || ||||| Sbjct 439976 GCGGTTACCCTGGTCGTTGGCGATGATTTCGATACGGTCGTCGCGGAAGATACCCACGCA 439917 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTT 8160 ||| ||||| || || | |||||| ||||| ||| | | ||| || Sbjct 439916 CGAGTACGTGGTACCCAGATCAATTCCGATAGCTGGTGCCATGTT 439872 Score = 150 bits (166), Expect = 2e-31 Identities = 266/388 (69%), Gaps = 0/388 (0%) Strand=Plus/Minus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||||||||| |||||||||||||| || | || || Sbjct 441061 ATGGCGGCCTGGACGGCGGCACCGTATGCGACAGCCTCATCGGGGTTGATGGACTTGTTG 441002 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || | || || | ||| | || | || ||||| || || || Sbjct 441001 GGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGACCTTGGGGATACGGGTGGAA 440942 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 ||||||||||| ||||| || | || || || |||||||| | || || || Sbjct 440941 CCACCGACCAAGACGATCTCGTGGACGGAGGACTTGTCGATCTTCGCATCGCGGAGGACA 440882 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 ||||| || ||||| ||||| | |||| ||||| || || ||||| ||| Sbjct 440881 CGCTCGACGGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCACAGCTCTTCGAAACGGGCA 440822 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 || || ||||| || ||||| || | || ||| | | || || || || |||| || Sbjct 440821 CGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAACAGGGAGTCGATCTCGATGGAAGTC 440762 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | || || | || ||||| || | ||| || || ||||| | |||||| ||| Sbjct 440761 TGAGCGGAAGAGGACAGGGTGCGCTTCGCCCTCTCGCAGGCGGTTCGGAGACGACGCAGG 440702 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCT 7409 || || | |||| || | ||| |||| Sbjct 440701 GCGCGGGCGTTAGAGGTGAGATCCTTCT 440674 >seq194 Length=621503 Score = 136 bits (150), Expect = 5e-27 Identities = 222/319 (70%), Gaps = 3/319 (1%) Strand=Plus/Plus Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 ||| ||| ||||| || || || || ||||| || ||||| |||| ||| || | | Sbjct 566953 CTTGACCGCCCAAATGGGTGTCACCAGCGGTGGCCTTGACAGTGAAGACACCACCCTGGA 567012 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 ||| | | || ||||| || ||||||||||| || || | ||||| |||||| | | Sbjct 567013 TGTGAAGAAGAGACACATCGAAAGTACCACCACCGAGATCGTAGATGAGGACGTTCCTCT 567072 Query 7584 CGTCGTCTTTGTTCTT---ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAA 7640 | | ||| || | |||||||||| |||||||| || || || || || || | Sbjct 567073 CCTTGTCAGACTTTCCGGAACCGAGACCGTAAGCGATAGCGGCGGCGGTAGGCTCGTTGA 567132 Query 7641 TAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCG 7700 | ||||| ||| |||||||||||| || | | || || || || ||||| || || Sbjct 567133 TGATACGGAGAACGTTCAGGCCAGCGATGGCACCGGCGTCCTTGGTGGCTTGACGCTGGT 567192 Query 7701 AATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACG 7760 ||||| |||||||| ||||| || | ||| || | | ||| ||||| ||||| | | Sbjct 567193 TGTCGTTGAAGTAGGCGGGGACGGTGATGACGGCCTTCTCGACCTTCTTGCCGAGCTTGG 567252 Query 7761 ATTCCGCGATATCTTTCAT 7779 || |||| || ||||| Sbjct 567253 TCTCAGCGACTTCCTTCAT 567271 >seq171 Length=1567143 Score = 118 bits (130), Expect = 1e-21 Identities = 224/328 (68%), Gaps = 10/328 (3%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||| | ||| || || || ||| | ||||| ||||||| ||| Sbjct 244718 TCGAAGTCCTCACCACCGAGGTGAGTGTCACCGTTGGTGGACTTGACCTCAAAGACACCA 244777 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | ||| | | | || | ||| || ||||||||||| || || | | |||| Sbjct 244778 GACTGAATCTCGAGGATGGAGATATCGAAAGTACCACCACCAAGATCGTAGACAGCTACG 244837 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| ||| || ||| || |||||||| || | ||| || || || ||||| Sbjct 244838 ------ACGTTGTCGGTGGCCTTGTCAAGACCGTAGGCAAGAGCGGCAGCAGTGGGTTCG 244891 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTC 7694 || | || ||| ||| ||| || ||||| || ||| | || || || || ||||| | Sbjct 244892 TTGACAACACGGAGAACGTTGAGACCAGCGAT--TTGACCAGCGTCCTTGGTAGCTTGAC 244949 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || || ||||| |||||||| ||||| || ||||| |||| | |||| ||||| || | Sbjct 244950 GCTGGGAGTCGTTGAAGTAGGCAGGGACGGTGACGACGGCGTTCTTGACGTTCTTGCCCA 245009 Query 7755 GATACGATTCCGCGATATCTTTCATTTT 7782 || || || || | || ||||| || Sbjct 245010 TGTAGGACTCGGCAGTCTCCTTCATCTT 245037 >seq393 Length=255347 Score = 109 bits (120), Expect = 7e-19 Identities = 340/521 (65%), Gaps = 9/521 (2%) Strand=Plus/Minus Query 105463 TCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC 105522 ||||| ||||||| || |||| ||||| | ||||| || || | |||||| | Sbjct 192072 TCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACCAGGGCAC 192013 Query 105523 TGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCT 105582 | | || || | || | ||||| || | || || || ||||||||||| || Sbjct 192012 TCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTTGGACACGCTTCATGAACAAGTCG 191953 Query 105583 GGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAA 105642 |||||||||| || | ||||| || || | |||| || | || || ||| Sbjct 191952 GGAATCCACAGAGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTTCCGTGGTTCTTG 191893 Query 105643 CGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGAC 105702 || | || || || | | | ||| ||||||||||| || | |||| |||| | Sbjct 191892 CGCAGGTCCAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCA 191833 Query 105703 CCTTTAC----GACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAA 105758 ||| | | ||| | | || | ||| || | ||||| ||| || || || | Sbjct 191832 CCTGGGCGCTTGTTGCCAC-CCTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACGGAG 191774 Query 105759 CATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACG 105818 ||| ||||| | ||| | |||||||| || || || | ||| | || | ||||| Sbjct 191773 CATGGGAATGAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTAGGAGCCGGTGGCACG 191714 Query 105819 TACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGAT--ACGCGCACACTCT 105876 | ||| |||| | |||||||| ||||| ||| ||| | ||||| | || Sbjct 191713 GATTCGGTGGACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCGCA-AGTC- 191656 Query 105877 TTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGAT 105936 || | ||| ||||| || |||||||| || |||||||| | | || ||||| || || Sbjct 191655 TTGAGTGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAG 191596 Query 105937 GACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGG 105977 ||||| || ||| ||||| || || |||||||| ||||| Sbjct 191595 GACATCTGGGGTGATGGTGTGCCTGCGTTGAACAGGGTTGG 191555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129513187760