Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq296 282 5e-71
seq194 136 5e-27
seq171 118 1e-21
seq393 109 7e-19
>seq296
Length=470551
Score = 282 bits (312), Expect = 5e-71
Identities = 489/705 (69%), Gaps = 8/705 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || | ||||| || ||||||||
Sbjct 440569 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCC 440510
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| ||||| | || | || ||||| || ||||||||||||| ||| || ||||| |||
Sbjct 440509 TCCTCAATAGTCAAGAGGGAGACATCGAAGGTACCACCACCCAAGTCGAAGATGAGGACG 440450
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| || | | | ||||| || |||||||| || || || || || || || ||
Sbjct 440449 TTGCGCTCACCCTGGGTCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCGGTGGGCTCG 440390
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| || ||| ||||| ||||| | ||||| || || || || |||
Sbjct 440389 TTGATGATACGGAGGACGTTGAGGCCGGCAATCAAACCAGCATCCTTGGTAGCCTGACGT 440330
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| |||||||| ||||| || || || |||| | || | ||||||
Sbjct 440329 TGAGAGTCGTTGAAGTAGGCAGGGACAGTGACAACAGCGTTGTTAACGGTGCCACCGAGG 440270
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || || | || |||| |||||||| ||||| ||||| ||||| || | |
Sbjct 440269 TAGGACTCAGCAGTTTCCCTCATCTTGGTAAGGACCATGGATGAGATCTCCTCTGGGGTG 440210
Query 7817 AACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875
|| ||| ||| || || || || || || | || | || || |||| | |
Sbjct 440209 AA-TGTCTTCTCCTCGCCCTTGAACTCGACCTGGATGACTGGCTT-GCCGC--CCTTGTC 440154
Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935
|| ||||| | | | | ||||| ||| | || |||| ||| || | ||||| |
Sbjct 440153 GACGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGAACCTCTTGATCGGCGAACTTGCG 440094
Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995
||||| || |||||||| || || || ||||| |||||||||||| |||||||||
Sbjct 440093 GCCGATGAGGCGCTTTGCGTCGAAGACAGTGTTGACGGGGTTCATGGCGACTTGGTTCTT 440034
Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055
||| | ||| || || ||||| || | || || || || ||| | || || || ||
Sbjct 440033 CGCAGAGTCACCAATCAGACGCTC---GGTGTCTGTGAAGGCAACGAAAGAGGGTGTTGT 439977
Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115
|| || || |||||||| || || ||||| | ||||||| | ||| || |||||
Sbjct 439976 GCGGTTACCCTGGTCGTTGGCGATGATTTCGATACGGTCGTCGCGGAAGATACCCACGCA 439917
Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTT 8160
||| ||||| || || | |||||| ||||| ||| | | ||| ||
Sbjct 439916 CGAGTACGTGGTACCCAGATCAATTCCGATAGCTGGTGCCATGTT 439872
Score = 150 bits (166), Expect = 2e-31
Identities = 266/388 (69%), Gaps = 0/388 (0%)
Strand=Plus/Minus
Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081
|||||||| ||||| | || ||||||||||| |||||||||||||| || | || ||
Sbjct 441061 ATGGCGGCCTGGACGGCGGCACCGTATGCGACAGCCTCATCGGGGTTGATGGACTTGTTG 441002
Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141
| || || ||||| || | || || | ||| | || | || ||||| || || ||
Sbjct 441001 GGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGACCTTGGGGATACGGGTGGAA 440942
Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201
||||||||||| ||||| || | || || || |||||||| | || || ||
Sbjct 440941 CCACCGACCAAGACGATCTCGTGGACGGAGGACTTGTCGATCTTCGCATCGCGGAGGACA 440882
Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261
||||| || ||||| ||||| | |||| ||||| || || ||||| |||
Sbjct 440881 CGCTCGACGGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCACAGCTCTTCGAAACGGGCA 440822
Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321
|| || ||||| || ||||| || | || ||| | | || || || || |||| ||
Sbjct 440821 CGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAACAGGGAGTCGATCTCGATGGAAGTC 440762
Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381
|| || | || || | || ||||| || | ||| || || ||||| | |||||| |||
Sbjct 440761 TGAGCGGAAGAGGACAGGGTGCGCTTCGCCCTCTCGCAGGCGGTTCGGAGACGACGCAGG 440702
Query 7382 GCACGCGGGTTACCGGAAATATCTTTCT 7409
|| || | |||| || | ||| ||||
Sbjct 440701 GCGCGGGCGTTAGAGGTGAGATCCTTCT 440674
>seq194
Length=621503
Score = 136 bits (150), Expect = 5e-27
Identities = 222/319 (70%), Gaps = 3/319 (1%)
Strand=Plus/Plus
Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523
||| ||| ||||| || || || || ||||| || ||||| |||| ||| || | |
Sbjct 566953 CTTGACCGCCCAAATGGGTGTCACCAGCGGTGGCCTTGACAGTGAAGACACCACCCTGGA 567012
Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583
||| | | || ||||| || ||||||||||| || || | ||||| |||||| | |
Sbjct 567013 TGTGAAGAAGAGACACATCGAAAGTACCACCACCGAGATCGTAGATGAGGACGTTCCTCT 567072
Query 7584 CGTCGTCTTTGTTCTT---ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAA 7640
| | ||| || | |||||||||| |||||||| || || || || || || |
Sbjct 567073 CCTTGTCAGACTTTCCGGAACCGAGACCGTAAGCGATAGCGGCGGCGGTAGGCTCGTTGA 567132
Query 7641 TAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCG 7700
| ||||| ||| |||||||||||| || | | || || || || ||||| || ||
Sbjct 567133 TGATACGGAGAACGTTCAGGCCAGCGATGGCACCGGCGTCCTTGGTGGCTTGACGCTGGT 567192
Query 7701 AATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACG 7760
||||| |||||||| ||||| || | ||| || | | ||| ||||| ||||| | |
Sbjct 567193 TGTCGTTGAAGTAGGCGGGGACGGTGATGACGGCCTTCTCGACCTTCTTGCCGAGCTTGG 567252
Query 7761 ATTCCGCGATATCTTTCAT 7779
|| |||| || |||||
Sbjct 567253 TCTCAGCGACTTCCTTCAT 567271
>seq171
Length=1567143
Score = 118 bits (130), Expect = 1e-21
Identities = 224/328 (68%), Gaps = 10/328 (3%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||| | ||| || || || ||| | ||||| ||||||| |||
Sbjct 244718 TCGAAGTCCTCACCACCGAGGTGAGTGTCACCGTTGGTGGACTTGACCTCAAAGACACCA 244777
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| ||| | | | || | ||| || ||||||||||| || || | | ||||
Sbjct 244778 GACTGAATCTCGAGGATGGAGATATCGAAAGTACCACCACCAAGATCGTAGACAGCTACG 244837
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
||| ||| || ||| || |||||||| || | ||| || || || |||||
Sbjct 244838 ------ACGTTGTCGGTGGCCTTGTCAAGACCGTAGGCAAGAGCGGCAGCAGTGGGTTCG 244891
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTC 7694
|| | || ||| ||| ||| || ||||| || ||| | || || || || ||||| |
Sbjct 244892 TTGACAACACGGAGAACGTTGAGACCAGCGAT--TTGACCAGCGTCCTTGGTAGCTTGAC 244949
Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754
| || || ||||| |||||||| ||||| || ||||| |||| | |||| ||||| || |
Sbjct 244950 GCTGGGAGTCGTTGAAGTAGGCAGGGACGGTGACGACGGCGTTCTTGACGTTCTTGCCCA 245009
Query 7755 GATACGATTCCGCGATATCTTTCATTTT 7782
|| || || || | || ||||| ||
Sbjct 245010 TGTAGGACTCGGCAGTCTCCTTCATCTT 245037
>seq393
Length=255347
Score = 109 bits (120), Expect = 7e-19
Identities = 340/521 (65%), Gaps = 9/521 (2%)
Strand=Plus/Minus
Query 105463 TCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC 105522
||||| ||||||| || |||| ||||| | ||||| || || | |||||| |
Sbjct 192072 TCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACCAGGGCAC 192013
Query 105523 TGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCT 105582
| | || || | || | ||||| || | || || || ||||||||||| ||
Sbjct 192012 TCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTTGGACACGCTTCATGAACAAGTCG 191953
Query 105583 GGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAA 105642
|||||||||| || | ||||| || || | |||| || | || || |||
Sbjct 191952 GGAATCCACAGAGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTTCCGTGGTTCTTG 191893
Query 105643 CGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGAC 105702
|| | || || || | | | ||| ||||||||||| || | |||| |||| |
Sbjct 191892 CGCAGGTCCAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCA 191833
Query 105703 CCTTTAC----GACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAA 105758
||| | | ||| | | || | ||| || | ||||| ||| || || || |
Sbjct 191832 CCTGGGCGCTTGTTGCCAC-CCTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACGGAG 191774
Query 105759 CATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACG 105818
||| ||||| | ||| | |||||||| || || || | ||| | || | |||||
Sbjct 191773 CATGGGAATGAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTAGGAGCCGGTGGCACG 191714
Query 105819 TACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGAT--ACGCGCACACTCT 105876
| ||| |||| | |||||||| ||||| ||| ||| | ||||| | ||
Sbjct 191713 GATTCGGTGGACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCGCA-AGTC- 191656
Query 105877 TTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGAT 105936
|| | ||| ||||| || |||||||| || |||||||| | | || ||||| || ||
Sbjct 191655 TTGAGTGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAG 191596
Query 105937 GACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGG 105977
||||| || ||| ||||| || || |||||||| |||||
Sbjct 191595 GACATCTGGGGTGATGGTGTGCCTGCGTTGAACAGGGTTGG 191555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635129513187760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |