Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq393 291 1e-73 seq403 152 6e-32 >seq393 Length=255347 Score = 291 bits (322), Expect = 1e-73 Identities = 1128/1743 (65%), Gaps = 41/1743 (2%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 ||||| |||||||| || ||||| || || | ||||| | | ||||| || | | Sbjct 193170 CGGAGGTAGTACATGCCCGTCTTAAGACCAAGCTTCCATCCAGCAAAGTGCATCGACGTG 193111 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGA 105707 | |||| ||| || || | |||| | |||| ||| |||| |||| || | Sbjct 193110 ATCTTGCCCATGGTAGGCTCCTTCATGTGGATGTTCAACGACTGGGACT--GGTCGATAA 193053 Query 105708 AGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCAT--CTTGATTTCCCACACTGT 105765 || |||||| | || ||||| || |||| | || | | ||||||||| || || Sbjct 193052 AGGCACCACGGTCGGCAGCCATCTCGATGA--TTCTGCGCTGCGAGATTTCCCAAACAGT 192995 Query 105766 GCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG-AATTGAACCCCCCG 105824 ||| || | |||| | ||||| ||||||| || || | || ||| ||||| ||| Sbjct 192994 CTTGTAAAGCTCCTTGGTCTCATCGGGGATAT-TGGGAATTCGTGCAATGGAACCACCCT 192936 Query 105825 CCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGA 105884 | || ||| | | |||||| | || ||||| || || || | || || |||| Sbjct 192935 CGGCGATGATGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACAAGGTCCTTGA 192876 Query 105885 CGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGT 105941 || ||| |||||| | | ||||| || ||||| | | ||| || |||| Sbjct 192875 GCAGCCATGG--GTTGACCACCTGGAACTCACCAGCGAGCACACGGCG-AGAGTAAATGT 192819 Query 105942 TCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTG 106001 | | ||||| || || ||||| || || || || | || || | ||||||||| |||| Sbjct 192818 TGGAAGTGTATGGCTCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTG 192759 Query 106002 GCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAA 106061 |||| ||||| || | || ||| || | ||| | | || ||||||| Sbjct 192758 GCATGGGTGCGATGAGCAGCGAGTTGCGGACACCGTGCTGGGCAATCTTGGCCTTGAGCT 192699 Query 106062 CATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTGAAGCAC-CC 106118 |||||||||| || || | | || || || ||||||| || | || || | || Sbjct 192698 CATCCCAGTCCCAGA-GATCGGTAGGGGTCTTCT-CCCACATGTCGTACTGGAGAATGCC 192641 Query 106119 CTTGG-GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCA 106177 ||||| ||| ||||| ||||| | ||||| || | ||| | | | || | || Sbjct 192640 CTTGGAGACA--GGAGATCCCTCGTAGGTCTCGTAAGGACCAAGTTCCTTGGCAATATCG 192583 Query 106178 CAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTG 106237 ||| || ||| | ||||| || ||||| || ||||| || || | || |||| Sbjct 192582 CAGGACGAAGTCAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTG 192523 Query 106238 GCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAAC 106296 || | | || || || | | || ||| | || |||| || ||||| || || Sbjct 192522 GCCTGGTTGGACTCGAAGG-GCAGGCGCAGGGCGAGGAAAGCATCGGCCAGACCCTGTAC 192464 Query 106297 ACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAA 106356 ||||| ||||||||||| ||| || | || ||||| ||||||||| || Sbjct 192463 ACCCATACCAATAGGTCGGTGGCGGAAGTTGCTGCGGCGCGCCTCCTCAACGGGGTAGTG 192404 Query 106357 ATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTT 106416 || ||||| | ||| | || ||| || | | || | || || || || Sbjct 192403 GTTGACCTCAATAATCTTGTTCAAGTTGCGGGTGACGACTTGGGTAACCTCGTGCAGCTT 192344 Query 106417 TTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAA 106476 || | | ||||| || || | | |||| | || || |||| || |||| Sbjct 192343 TTGAAAGTCAAACTCGCCGCGCTTGTAGTCGACAAATGAAGGCAGAGCGAGCGAAGCCAG 192284 Query 106477 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGA 106536 ||||| ||||| |||||| | | |||||||| | ||| || || || | |||||| Sbjct 192283 GTTGCAGACAGCGACCTCATCAGGAGCAGTGTACTCGACAATCTCGGTGCAGAGGTTGGA 192224 Query 106537 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAG 106596 || ||| || |||| ||||| ||||| ||||| |||||| |||||||||||||| Sbjct 192223 GCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAG 192164 Query 106597 CATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGG 106655 ||| |||| | || ||||| ||||| | || || || || | ||||| | || | || Sbjct 192163 CATAAAGGGGTTACCAGTCTCAGTCTGAGCCTCAAGGATAGCATACCACAGCTTCTG-GG 192105 Query 106656 CTGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 | | || | || ||||| | | | |||||| | ||| || ||||| ||| Sbjct 192104 CGCGAACCGTCTCG-CGGCCCTTGTTTTGCTTCTCGTAGCTCTCGTACAGCGCTTCGAAC 192046 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 106774 || || || | |||| ||||| || || || || || | || | ||| | Sbjct 192045 TCGTCGCCGTAGACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGGGTCCAATCG 191986 Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834 || ||| | || ||||||||||| | ||| ||||||||||| | | |||||||| Sbjct 191985 CCGTTCTCTTGGACACGCTTCATGAACAAGTCGGGAATCCACAGAGCGTAGAAGAGATCG 191926 Query 106835 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 106894 | ||| |||| || | || ||||| || | || ||||| | | || ||| Sbjct 191925 CGGGCGCGAACCTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAGGAAGCCAAAGACATCA 191866 Query 106895 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGA 106948 ||||||||||||||||| |||| || | | || | | ||| ||| | || Sbjct 191865 GCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACC---TGGGCGCTTGTTGCCACCCTGG 191809 Query 106949 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 107008 | || ||||| || ||| ||| |||| || ||||| ||||| | ||| | |||| Sbjct 191808 TCGACGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTTGATGTT 191749 Query 107009 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 107068 || || || || | ||| || |||| | | |||| || | |||||| Sbjct 191748 CCGTTGGTGCCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTGGACGTTGAGACCAATA 191689 Query 107069 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 107128 || ||||| ||| ||||| || || | | || || | ||||| |||| ||| Sbjct 191688 CCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTCGATG 191629 Query 107129 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 107188 ||| ||||| || |||| |||||||| ||||||||| ||| |||||| || || Sbjct 191628 CTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCCTGCG 191569 Query 107189 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTGGGACATCTTGTCGTATGTCTC 107247 ||||| |||||||| | ||||| | || ||| ||| ||||| | |||||| ||||| Sbjct 191568 TTGAACAGGGTTGGCGAGGCGTGTGT-AAAGTACTTTTGCGACATGTAGTCGTAAGTCTC 191510 Query 107248 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTG 107307 | | | |||||||| || ||||| ||||||| ||| || ||||| | ||||| ||| Sbjct 191509 AATGGCCTTTTCAATGTCATCGCCGTGTATGCCGACGGCAACTCGCATGAGCATGTGTTG 191450 Query 107308 GGG 107310 || Sbjct 191449 TGG 191447 >seq403 Length=285126 Score = 152 bits (168), Expect = 6e-32 Identities = 310/455 (68%), Gaps = 14/455 (3%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| ||||| |||||||| |||||||||||||| ||| |||| ||||| ||||| Sbjct 107405 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATG 107464 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCA--AAT--GGGTGGCACCCCAACTTGTTTGAGGAG 117101 ||||| || || || | ||||| | | | |||| || | | | | ||| || Sbjct 107465 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGGGGTTGC-CGAGAGCAAG---GAGCAG 107520 Query 117102 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATT 117161 ||| || | || |||||||||||| | |||| | |||||| |||| ||| Sbjct 107521 ACGGTCGGCGACGAACTCAATGTACTGGCACATGAGAGTGGCGTTCATGCCGAGAAGAGC 107580 Query 117162 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 117221 || || || ||||| || |||| | | ||||||||| || || || | | ||| || Sbjct 107581 GCAAGGAAGCGCGTCGCTGAGGAACTCCTGCTCAATCTCGACAGCTTCGGTGATGATAGC 107640 Query 117222 GTGGATAGTTTCGGTAGTGGGTC---TATTACGCAAAGTCTTGAAGAGCTCCACGGCAAA 117278 | || || | | |||| | | || | | || ||||||| |||||| Sbjct 107641 CTCGACAGCAGCCTTGCTGGGGCGGTTGTTGAGGAGAGA---GAAGAGCAGGCAGGCAAA 107697 Query 117279 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCAT 117338 || ||| | |||||| || || || || || || || |||||| || || ||||| Sbjct 107698 GTCGGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCAT 107757 Query 117339 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 117398 |||||| |||||||||||||| | || | | |||||| ||| ||||||||||||||| Sbjct 107758 GAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGAACCGCTGAAGAAGATACCCTC 107817 Query 117399 CACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 || |||||||| | ||| || | ||| |||| Sbjct 107818 AACGGCGGCAAACGCGACAAGACGGTTGGCAAAGG 107852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977746849360