Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq171 100 2e-15 >seq171 Length=1567143 Score = 100 bits (110), Expect = 2e-15 Identities = 117/157 (75%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 550381 TGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAAC 550439 ||| |||||| || | | | || || | || || || || || || || ||||| || | Sbjct 245009 TGGGCAAGAACGTCAAGAACGCCGTCGTCACCGTCCCTGCCTACTTCAACGACTCCCAGC 244950 Query 550440 GTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATG 550499 |||||||||| || || ||||| | || ||||| || || ||||| ||| || |||| | Sbjct 244949 GTCAAGCTACCAAGGACGCTGGTCAAATCGCTGGTCTCAACGTTCTCCGTGTTGTCAACG 244890 Query 550500 AACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 |||| |||||||| || ||||| || || ||||| || Sbjct 244889 AACCCACTGCTGCCGCTCTTGCCTACGGTCTTGACAA 244853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029274105812860