Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq393 383 3e-101 seq403 172 1e-37 >seq393 Length=255347 Score = 383 bits (424), Expect = 3e-101 Identities = 903/1352 (67%), Gaps = 31/1352 (2%) Strand=Plus/Minus Query 212858 CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTAT 212917 ||||| ||| ||| |||||| || | ||| ||||| ||| |||||||| | Sbjct 192916 CATGTTCTCAGACCACAGGCCCATGTCGACAAGGTCCTTGAGCAGCCATGGGTTGACCAC 192857 Query 212918 CTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCT 212977 |||||| ||||| | |||||| | | ||||| ||| |||||||| ||||||| || Sbjct 192856 CTGGAACTCACCAGCGAGCACACGGCGAGAGTAAATGTTGGAAGTGTATGGCTCGAAGCA 192797 Query 212978 CTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACT 213037 ||||||||| || |||||||| | ||| ||| || |||||||| || | || || Sbjct 192796 CTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTGGCATGGGTGCGATGAGCAGCGA 192737 Query 213038 GTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGA 213097 ||| | || ||||||| | | || | | ||||| |||||||||| ||| Sbjct 192736 GTTGCGGACACCGTGCTGGGCAATCTTGGCCTTGAGCTCATCCCAGTCCCAG-----AGA 192682 Query 213098 CAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCT 213157 ||| ||| ||| | ||||||||| |||| | ||||| ||| || || Sbjct 192681 TCGGTAGGGGTC-TTCTC---CCACATGTCGTACTGGAGAATGCCCTTGGAGACAGGAGA 192626 Query 213158 GCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGC 213217 |||| ||| | ||| || ||| | |||||||| | |||||||||| ||| || Sbjct 192625 TCCCTCGTAGGTCTCGTAAGGACCAAGTTCCTTGGCAATATCGCAGGACGAAGTCAGAGC 192566 Query 213218 AGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAA 213277 |||| ||||||||| || || |||| |||||||||||||||||| |||| ||| Sbjct 192565 GGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTTCTTGGCCTGGTTGGACTCGAA 192506 Query 213278 GGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCT 213337 ||||| || | |||| |||| ||||| ||||| || || || || || |||| Sbjct 192505 GGGCAGGCGCAGGGCGAGGAAAGCATCGGCCAGACCCTGTACACCCATACCAATAGGTCG 192446 Query 213338 GTGTCTCAGGTTAGACTTGGAGCAC-TCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCT 213396 ||| | | ||| | || || | ||||| | |||||| |||| || || |||| Sbjct 192445 GTGGCGGAAGTT-GCTGCGGCGCGCCTCCTCAACGGGGTAGTGGTTGACCTCAATAATCT 192387 Query 213397 TGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTG---AACA 213453 |||| | |||||||||| | |||| ||| || | | ||| || ||| | ||| Sbjct 192386 TGTTCAAGTTGCGGGTGACGACTTGGGTAACCTCGTGCAG---CTTTTGAAAGTCAAACT 192330 Query 213454 CGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCA 213513 || || | || | ||||| |||||| |||| ||||||||||| || || | Sbjct 192329 CGCCGCGCTTGTAGTCGACAAATGAAGGCAGAGCGAGCGAAGCCAGGTTGCAGACAGCGA 192270 Query 213514 CCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGC 213573 |||| | || | |||||||| | ||||||||||| |||||| || || ||||||| Sbjct 192269 CCTCATCAGGAGCAGTGTACTCGACAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGTGC 192210 Query 213574 CCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACC 213633 ||||||||| ||||| ||| |||| || ||||||||||||||| ||||| | Sbjct 192209 CCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTAC 192150 Query 213634 CGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCC 213693 | ||||| ||| | | | || || ||| || | | ||| | | ||| | Sbjct 192149 CAGTCTCAGTCTGAGCCTCAAGGATAGCATACCACAGCTTCTGGGC----GCGAACCGTC 192094 Query 213694 TGACAGCTCCGGGCGTAGC--CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA 213751 | | || || | | || |||||| ||||| ||| | | ||| |||| ||| | Sbjct 192093 TCGCGGC-CCTTGTTTTGCTTCTCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTA 192035 Query 213752 GACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCT 213811 ||| | | || || || || ||| ||||| ||| |||| || |||| ||| Sbjct 192034 GACATCGGCAAGACCAGGGCACTCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTTG 191975 Query 213812 GACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCT 213871 ||| | || |||||||| ||| || | |||||| ||| ||| || || | || | Sbjct 191974 GACACGCTTCATGAACAAGTCGGGAATCCACAGAGCGTAGAAGAGATCGCGGGCGCGAAC 191915 Query 213872 CTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGG 213931 ||| ||| ||| ||| |||||||| || || ||| |||||| || |||||||| || Sbjct 191914 CTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAGGAAGCCAAAGACATCAGCGTGCCATGG 191855 Query 213932 CTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGC 213988 ||| | ||||||||||||||| || | || | ||||| |||||||| || | || Sbjct 191854 CTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGC 191795 Query 213989 CACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGC 214048 ||||| | | || || | ||| | || ||||| || ||||||||| || | Sbjct 191794 GGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTTGATGTTCCGTTGGTGCCGCC 191735 Query 214049 TATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGAGCCCTATGCCACCGGCGTAC 214106 || || ||||||| ||| | | | || | | |||| || || || || ||| | Sbjct 191734 AATGTAGGAGCCGGTGGCACGGATTCGGTGGACGTTGAGA--CCAATACCGCCAGCGGTC 191677 Query 214107 TTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTG 214166 |||||||||| ||||| | | | || || ||||||| | |||||||| || | Sbjct 191676 TTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTC 191617 Query 214167 AGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGG 214198 | || | | ||||||| || | |||||| Sbjct 191616 ATGTCGATGAGGAAGCAGGAGGACATCTGGGG 191585 >seq403 Length=285126 Score = 172 bits (190), Expect = 1e-37 Identities = 353/518 (68%), Gaps = 15/518 (3%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| || || | ||||| |||||||| ||||| || | | ||||||||||||| Sbjct 107402 TGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCC 107461 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGG 47959 |||||| ||||||||||| | ||| || | | ||| | ||||| Sbjct 107462 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGGGGTTGCCGAGAGCAAGGAGCAGA 107521 Query 47960 TGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA- 48018 | || |||||| |||| ||||| | ||||||| ||| ||||||||| | || | Sbjct 107522 CGGTCGGCGACGAACTCAATGTACTGGCACATGAGAGTGGCGTTCATGCCGAGAAGAGCG 107581 Query 48019 CACGGGCAAAGC-CTTTG-TGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 || || |||| | | | |||| ||||||| ||| |||| || ||||| | || Sbjct 107582 CAAGG---AAGCGCGTCGCTGAGGAACTCCTGCTCAATCTCGACAGCTTCGGTGATGATA 107638 Query 48077 TGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 || || | || ||| || | |||||| | || | |||||| |||| Sbjct 107639 GCCTCGACAGCAGCCTTGCTGGGGCGGTTGTTGAGGAGA------GAGAAGAGCAGGCAG 107692 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| |||||| || ||||| || ||||||| ||||||||||| ||||| Sbjct 107693 GCAAAGTCGGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCG 107752 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| || | || || | |||||| || | ||||| || || ||||||||| Sbjct 107753 GGCATGAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGAACCGCTGAAGAAGATA 107812 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || || |||||| || | | | || | | ||||||||| |||||| Sbjct 107813 CCCTCAACGGCGGCAAACGCGACAAGACGGTTGGCAAAGGTGGAGTTCTTGTCAGAGATC 107872 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || ||| ||||| || |||||||| |||||| || Sbjct 107873 CATCGAAGAGCCCAATCAGCCTTCTTGCGGATGCAGGG 107910 Score = 98.7 bits (108), Expect = 2e-15 Identities = 172/250 (69%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||||||||| || ||||| || ||||||||| ||||||||| | ||||| | Sbjct 108036 TCTCAGAGTGGACGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGCGCCTCGGGAA 108095 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 || ||||| ||||||| | || | || ||||| ||||| || ||||| || || | Sbjct 108096 TTTGTACTTCGCTGGAGAAGCGTTCGACCAAGTTCTCGTTGACAATGCCATCCGAGGCGG 108155 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCC 48605 | || |||||||||||||| | |||| |||||||| || | | | | |||| Sbjct 108156 CGAAAAAGGCAAGGACATGGGAGATGAAAAAGCGCTCGTCGTCGTTCAATCGCTTGTTCC 108215 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | ||| ||| || || | || || | |||||||| || || || | Sbjct 108216 AGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCT 108275 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 108276 TCTTGTACAT 108285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527979317760