Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq393 288 1e-72
seq403 152 6e-32
>seq393
Length=255347
Score = 288 bits (318), Expect = 1e-72
Identities = 1117/1735 (64%), Gaps = 23/1735 (1%)
Strand=Plus/Plus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
|||||| ||||| ||||||| || || ||||||| ||||| || |||||||| |
Sbjct 191446 CCCACAACACATGCTCATGCGAGTTGCCGTCGGCATACACGGCGATGACATTGAAAAGGC 191505
Query 75271 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 75329
| | ||||| |||||| | ||||| ||| ||| || | ||||| | |||||||| |
Sbjct 191506 CATTGAGACTTACGACTACATGTCGCAAAAGTACTTT-ACACACGCCTCGCCAACCCTGT 191564
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||| || || |||||| ||| ||||||||| |||||||| |||| || ||||| |
Sbjct 191565 TCAACGCAGGCACACCATCACCCCAGATGTCCTCCTGCTTCCTCATCGACATGAAGGAAG 191624
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| ||| |||| ||||| | || || | | || || ||||| ||| ||||
Sbjct 191625 ACAGCATCGACGGCATCTACGACACACTCAAGACTTGCGCTTTGATCTCCAAGACCGCTG 191684
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| |||||||| | || |||| | | |||| || ||| | || || |
Sbjct 191685 GCGGTATTGGTCTCAACGTCCACCGAATCCGTGCCACCGGCTCCTACATTGGCGGCACCA 191744
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| || |||| | ||| | ||||| ||||| || |||| ||| ||| || ||||| |
Sbjct 191745 ACGGAACATCAAACGGTCTCATTCCCATGCTCCGTGTATACAACAACACCGCTCGCTACG 191804
Query 75570 TAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625
| | || | | ||| | || || || | || ||||| | || ||||||||
Sbjct 191805 TCGACCAGG-GTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATGGCAC 191863
Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685
|| ||| || | | ||||| || | || ||||| || | || |||| |||
Sbjct 191864 GCTGATGTCTTTGGCTTCCTGGACCTGCGCAAGAACCACGGAAAGGAGGAGGTTCGCGCC 191923
Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745
| |||||||| | | ||||||||||| ||| | ||||||||||| || | |||
Sbjct 191924 CGCGATCTCTTCTACGCTCTGTGGATTCCCGACTTGTTCATGAAGCGTGTCCAAGAGAAC 191983
Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805
|| | ||| | || | || || || || || ||||| |||| | || ||
Sbjct 191984 GGCGATTGGACCCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGATGTCTACGGCGAC 192043
Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCA 75865
||||| ||||| || ||| | || || || | | | | | ||| || |
Sbjct 192044 GAGTTCGAAGCGCTGTACGAGAGCTACGAGAAGCAAAACAAGGGCCGCGAGACGGTTCGC 192103
Query 75866 GCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924
||| | || | | ||| | ||||| || | | ||||| |||||||| | || | |||
Sbjct 192104 GCC-CAGAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGACTGGTAACCCCTTTAT 192162
Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984
||| |||||||||||||| ||| ||||| ||||| ||||| |||| || || ||
Sbjct 192163 GCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATTCGCAG 192222
Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044
||| || || ||||| || ||| | |||||||| | | |||||| ||||| |||||
Sbjct 192223 CTCCAACCTCTGCACCGAGATTGTCGAGTACACTGCTCCTGATGAGGTCGCTGTCTGCAA 192282
Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGA 76104
|||| || |||| || || | |||| | | || || ||||| | | |
Sbjct 192283 CCTGGCTTCGCTCGCTCTGCCTTCATTTGTCGACTACAAGCGCGGCGAGTTTGACTTTCA 192342
Query 76105 AAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164
||| || || || | || | | || ||| || | ||| | ||||| ||
Sbjct 192343 AAAGCTGCACGAGGTTACCCAAGTCGTCACCCGCAACTTGAACAAGATTATTGAGGTCAA 192402
Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224
|| ||||||||| ||||| || | || ||| ||||||||||| ||||
Sbjct 192403 CCACTACCCCGTTGAGGAGGCGCGCCGCAGCAACTTCCGCCACCGACCTATTGGTATGGG 192462
Query 76225 TGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAGATGAAG 76283
||| || ||||| || |||| || | ||| || | | || || || | | |
Sbjct 192463 TGTACAGGGTCTGGCCGATGCTTTCCTCGCCCTGCGCCTGC-CCTTCGAGTCCAACCAGG 192521
Query 76284 CCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTT 76343
||||| || | || || ||||| || ||||| || ||||| | ||| || |
Sbjct 192522 CCAAGAAGCTCAACATTCAGATCTTCGAGACCATCTACCACGCCGCTCTGACTTCGTCCT 192581
Query 76344 GTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAG 76403
| || | || | | | ||| | || ||||| | ||||| ||||| | ||| | |
Sbjct 192582 GCGATATTGCCAAGGAACTTGGTCCTTACGAGACCTACGAGGGATCTCCTGTCTCCAAGG 192641
Query 76404 GGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGATGT 76461
| | || |||| || ||||||| || || || | | || || ||||||||||
Sbjct 192642 GCATTCTCCAGTACGACATGTGGG-AGAAGACCCCTACCGATC-TCTGGGACTGGGATGA 192699
Query 76462 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 76521
||||||| || || | ||| | || ||| || | || ||||| |||||
Sbjct 192700 GCTCAAGGCCAAGATTGCCCAGCACGGTGTCCGCAACTCGCTGCTCATCGCACCCATGCC 192759
Query 76522 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAA 76581
||| ||||||||| | || || | || || || || ||||| || |||||||| | ||
Sbjct 192760 AACTGCCTCCACCTCGCAGATTCTCGGAAACAACGAGTGCTTCGAGCCATACACTTCCAA 192819
Query 76582 CATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAA 76641
||| ||| | | ||||| |||||||| | |||||| || ||||
Sbjct 192820 CATTTACTCTCGCCGTGTGCTCGCTGGTGAGTTCCAGGTGGTCAACCCATGGCTGCTCAA 192879
Query 76642 TGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGG 76701
||||| | || || || ||||| || | |||||| | | ||| | | |||
Sbjct 192880 GGACCTTGTCGACATGGGCCTGTGGTCTGAGAACATGAAGAACCGCATCATCGCCGAGGG 192939
Query 76702 TGGTTCCATT-CAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAG 76760
|||||||||| || | || || ||||||| ||||| | |||| | || ||| || |
Sbjct 192940 TGGTTCCATTGCACGAATTCCCA-ATATCCCCGATGAGACCAAGGAGCTTTACAAGACTG 192998
Query 76761 TGTGGGAAATCAAG-ATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATT 76819
| ||||||||| | | ||| |||| || ||||| || || |||||| ||| ||
Sbjct 192999 TTTGGGAAATCTCGCAGCGCAGA-ATCATCGAGATGGCTGCCGACCGTGGTGCCTTTATC 193057
Query 76820 GATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTT 76877
|| | |||| ||| |||| | |||| | || || ||| |||| || | |
Sbjct 193058 GACC--AGTCCCAGTCGTTGAACATCCACATGAAGGAGCCTACCATGGGCAAGATCACGT 193115
Query 76878 CTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932
| ||||| | | ||||| | || || || || || |||||||| |||||
Sbjct 193116 CGATGCACTTTGCTGGATGGAAGCTTGGTCTTAAGACGGGCATGTACTACCTCCG 193170
>seq403
Length=285126
Score = 152 bits (168), Expect = 6e-32
Identities = 310/455 (68%), Gaps = 14/455 (3%)
Strand=Plus/Minus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||| ||| | || ||| | |||||||| || ||||||||||||||| ||| ||||
Sbjct 107852 CCTTTGCCAACCGTCTTGTCGCGTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTTCAT 107793
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
|| | | || | |||||||||||||| ||||||||||| || || |||||| || |
Sbjct 107792 TCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCAACG 107733
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248
| || || || || || |||||| | ||| || |||||| ||||||| ||
Sbjct 107732 AGCTCATCTCTCGTGACGAGGGTATGCACACCGACTTTGCCTGCCTGCTCTTC---TCTC 107676
Query 65249 TGCGTAATA---GACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305
| | || | | |||| | | || || | || ||| | | || || || ||||
Sbjct 107675 TCCTCAACAACCGCCCCAGCAAGGCTGCTGTCGAGGCTATCATCACCGAAGCTGTCGAGA 107616
Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365
||||| | | |||| || ||||| || || || ||| |||| |||||| |
Sbjct 107615 TTGAGCAGGAGTTCCTCAGCGACGCGCTTCCTTGCGCTCTTCTCGGCATGAACGCCACTC 107556
Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCAC 65425
|||| | |||||||||||| || | || ||||| ||| | | | | || ||
Sbjct 107555 TCATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTGCTC---CTTGCTCTCG-GCAAC 107500
Query 65426 CC--ATT--TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGG 65481
|| | | | ||||| | || || || ||||| ||||| ||||| |||| |||
Sbjct 107499 CCCAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCTGGC 107440
Query 65482 AAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
|||||||||||||| |||||||| ||||| |||||
Sbjct 107439 AAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 107405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596566512752320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |