Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq393 288 1e-72 seq403 152 6e-32 >seq393 Length=255347 Score = 288 bits (318), Expect = 1e-72 Identities = 1117/1735 (64%), Gaps = 23/1735 (1%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 |||||| ||||| ||||||| || || ||||||| ||||| || |||||||| | Sbjct 191446 CCCACAACACATGCTCATGCGAGTTGCCGTCGGCATACACGGCGATGACATTGAAAAGGC 191505 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 75329 | | ||||| |||||| | ||||| ||| ||| || | ||||| | |||||||| | Sbjct 191506 CATTGAGACTTACGACTACATGTCGCAAAAGTACTTT-ACACACGCCTCGCCAACCCTGT 191564 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| || || |||||| ||| ||||||||| |||||||| |||| || ||||| | Sbjct 191565 TCAACGCAGGCACACCATCACCCCAGATGTCCTCCTGCTTCCTCATCGACATGAAGGAAG 191624 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || ||| |||| ||||| | || || | | || || ||||| ||| |||| Sbjct 191625 ACAGCATCGACGGCATCTACGACACACTCAAGACTTGCGCTTTGATCTCCAAGACCGCTG 191684 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | |||||||| | || |||| | | |||| || ||| | || || | Sbjct 191685 GCGGTATTGGTCTCAACGTCCACCGAATCCGTGCCACCGGCTCCTACATTGGCGGCACCA 191744 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || |||| | ||| | ||||| ||||| || |||| ||| ||| || ||||| | Sbjct 191745 ACGGAACATCAAACGGTCTCATTCCCATGCTCCGTGTATACAACAACACCGCTCGCTACG 191804 Query 75570 TAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 | | || | | ||| | || || || | || ||||| | || |||||||| Sbjct 191805 TCGACCAGG-GTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATGGCAC 191863 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 || ||| || | | ||||| || | || ||||| || | || |||| ||| Sbjct 191864 GCTGATGTCTTTGGCTTCCTGGACCTGCGCAAGAACCACGGAAAGGAGGAGGTTCGCGCC 191923 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 | |||||||| | | ||||||||||| ||| | ||||||||||| || | ||| Sbjct 191924 CGCGATCTCTTCTACGCTCTGTGGATTCCCGACTTGTTCATGAAGCGTGTCCAAGAGAAC 191983 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805 || | ||| | || | || || || || || ||||| |||| | || || Sbjct 191984 GGCGATTGGACCCTGATGTGCCCCAACGAGTGCCCTGGTCTTGCCGATGTCTACGGCGAC 192043 Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCA 75865 ||||| ||||| || ||| | || || || | | | | | ||| || | Sbjct 192044 GAGTTCGAAGCGCTGTACGAGAGCTACGAGAAGCAAAACAAGGGCCGCGAGACGGTTCGC 192103 Query 75866 GCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924 ||| | || | | ||| | ||||| || | | ||||| |||||||| | || | ||| Sbjct 192104 GCC-CAGAAGCTGTGGTATGCTATCCTTGAGGCTCAGACTGAGACTGGTAACCCCTTTAT 192162 Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984 ||| |||||||||||||| ||| ||||| ||||| ||||| |||| || || || Sbjct 192163 GCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATTCGCAG 192222 Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 ||| || || ||||| || ||| | |||||||| | | |||||| ||||| ||||| Sbjct 192223 CTCCAACCTCTGCACCGAGATTGTCGAGTACACTGCTCCTGATGAGGTCGCTGTCTGCAA 192282 Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGA 76104 |||| || |||| || || | |||| | | || || ||||| | | | Sbjct 192283 CCTGGCTTCGCTCGCTCTGCCTTCATTTGTCGACTACAAGCGCGGCGAGTTTGACTTTCA 192342 Query 76105 AAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 ||| || || || | || | | || ||| || | ||| | ||||| || Sbjct 192343 AAAGCTGCACGAGGTTACCCAAGTCGTCACCCGCAACTTGAACAAGATTATTGAGGTCAA 192402 Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224 || ||||||||| ||||| || | || ||| ||||||||||| |||| Sbjct 192403 CCACTACCCCGTTGAGGAGGCGCGCCGCAGCAACTTCCGCCACCGACCTATTGGTATGGG 192462 Query 76225 TGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAGATGAAG 76283 ||| || ||||| || |||| || | ||| || | | || || || | | | Sbjct 192463 TGTACAGGGTCTGGCCGATGCTTTCCTCGCCCTGCGCCTGC-CCTTCGAGTCCAACCAGG 192521 Query 76284 CCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTT 76343 ||||| || | || || ||||| || ||||| || ||||| | ||| || | Sbjct 192522 CCAAGAAGCTCAACATTCAGATCTTCGAGACCATCTACCACGCCGCTCTGACTTCGTCCT 192581 Query 76344 GTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAG 76403 | || | || | | | ||| | || ||||| | ||||| ||||| | ||| | | Sbjct 192582 GCGATATTGCCAAGGAACTTGGTCCTTACGAGACCTACGAGGGATCTCCTGTCTCCAAGG 192641 Query 76404 GGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGATGT 76461 | | || |||| || ||||||| || || || | | || || |||||||||| Sbjct 192642 GCATTCTCCAGTACGACATGTGGG-AGAAGACCCCTACCGATC-TCTGGGACTGGGATGA 192699 Query 76462 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 76521 ||||||| || || | ||| | || ||| || | || ||||| ||||| Sbjct 192700 GCTCAAGGCCAAGATTGCCCAGCACGGTGTCCGCAACTCGCTGCTCATCGCACCCATGCC 192759 Query 76522 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAA 76581 ||| ||||||||| | || || | || || || || ||||| || |||||||| | || Sbjct 192760 AACTGCCTCCACCTCGCAGATTCTCGGAAACAACGAGTGCTTCGAGCCATACACTTCCAA 192819 Query 76582 CATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAA 76641 ||| ||| | | ||||| |||||||| | |||||| || |||| Sbjct 192820 CATTTACTCTCGCCGTGTGCTCGCTGGTGAGTTCCAGGTGGTCAACCCATGGCTGCTCAA 192879 Query 76642 TGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGG 76701 ||||| | || || || ||||| || | |||||| | | ||| | | ||| Sbjct 192880 GGACCTTGTCGACATGGGCCTGTGGTCTGAGAACATGAAGAACCGCATCATCGCCGAGGG 192939 Query 76702 TGGTTCCATT-CAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAG 76760 |||||||||| || | || || ||||||| ||||| | |||| | || ||| || | Sbjct 192940 TGGTTCCATTGCACGAATTCCCA-ATATCCCCGATGAGACCAAGGAGCTTTACAAGACTG 192998 Query 76761 TGTGGGAAATCAAG-ATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATT 76819 | ||||||||| | | ||| |||| || ||||| || || |||||| ||| || Sbjct 192999 TTTGGGAAATCTCGCAGCGCAGA-ATCATCGAGATGGCTGCCGACCGTGGTGCCTTTATC 193057 Query 76820 GATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTT 76877 || | |||| ||| |||| | |||| | || || ||| |||| || | | Sbjct 193058 GACC--AGTCCCAGTCGTTGAACATCCACATGAAGGAGCCTACCATGGGCAAGATCACGT 193115 Query 76878 CTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | ||||| | | ||||| | || || || || || |||||||| ||||| Sbjct 193116 CGATGCACTTTGCTGGATGGAAGCTTGGTCTTAAGACGGGCATGTACTACCTCCG 193170 >seq403 Length=285126 Score = 152 bits (168), Expect = 6e-32 Identities = 310/455 (68%), Gaps = 14/455 (3%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| ||| | || ||| | |||||||| || ||||||||||||||| ||| |||| Sbjct 107852 CCTTTGCCAACCGTCTTGTCGCGTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTTCAT 107793 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | | || | |||||||||||||| ||||||||||| || || |||||| || | Sbjct 107792 TCGCCTCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCAACG 107733 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248 | || || || || || |||||| | ||| || |||||| ||||||| || Sbjct 107732 AGCTCATCTCTCGTGACGAGGGTATGCACACCGACTTTGCCTGCCTGCTCTTC---TCTC 107676 Query 65249 TGCGTAATA---GACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 | | || | | |||| | | || || | || ||| | | || || || |||| Sbjct 107675 TCCTCAACAACCGCCCCAGCAAGGCTGCTGTCGAGGCTATCATCACCGAAGCTGTCGAGA 107616 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365 ||||| | | |||| || ||||| || || || ||| |||| |||||| | Sbjct 107615 TTGAGCAGGAGTTCCTCAGCGACGCGCTTCCTTGCGCTCTTCTCGGCATGAACGCCACTC 107556 Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCAC 65425 |||| | |||||||||||| || | || ||||| ||| | | | | || || Sbjct 107555 TCATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTGCTC---CTTGCTCTCG-GCAAC 107500 Query 65426 CC--ATT--TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGG 65481 || | | | ||||| | || || || ||||| ||||| ||||| |||| ||| Sbjct 107499 CCCAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTGCTGGC 107440 Query 65482 AAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 |||||||||||||| |||||||| ||||| ||||| Sbjct 107439 AAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 107405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566512752320