Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq296 269 3e-67 seq225 170 3e-37 seq171 138 1e-27 seq194 102 1e-16 seq272 96.9 5e-15 seq333 89.7 7e-13 >seq296 Length=470551 Score = 269 bits (298), Expect = 3e-67 Identities = 489/713 (69%), Gaps = 7/713 (1%) Strand=Plus/Plus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| | | |||||| || || ||| | || || || ||||| || || ||| | | | Sbjct 439875 ATGGCACCAGCTATCGGAATTGATCTGGGTACCACGTACTCGTGCGTGGGTATCTTCCGC 439934 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 | || ||| | || || ||| | || ||||| || ||||| ||||| || || | |||| Sbjct 439935 GACGACCGTATCGAAATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCTTTCGTT 439994 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 ||||| ||||| | || ||||| |||| || | || || || || || |||||| Sbjct 439995 GCCTTCACAGACACCGAGCGTCTGATTGGTGACTCTGCGAAGAACCAAGTCGCCATGAAC 440054 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 || |||| |||||||| ||||| ||||| || || || |||||||| | ||| | | Sbjct 440055 CCCGTCAACACTGTCTTCGACGCAAAGCGCCTCATCGGCCGCAAGTTCGCCGATCAAGAG 440114 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGC 195587 || || | ||| || ||| ||| | | | ||| | || | | | ||| |||| Sbjct 440115 GTTCAGGCCGACATGAAGCACTTCCCCT-TCAAGGTCGTCGACAAGGGCGGC----AAGC 440169 Query 195588 CTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGT 195647 | | || | || || || | || ||| |||| ||| | || || || || || | Sbjct 440170 CAGTCATCCAGGTCGAGTTCAAGGGCGAGGAGAAGACATTCACCCCAGAGGAGATCTCAT 440229 Query 195648 CTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAG 195707 | ||||| | | ||||||| ||| ||||| || || | | | ||| || || || Sbjct 440230 CCATGGTCCTTACCAAGATGAGGGAAACTGCTGAGTCCTACCTCGGTGGCACCGTTAACA 440289 Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 | || ||||| ||||| ||||| ||||||| || || ||||| ||||| || ||||| | Sbjct 440290 ACGCTGTTGTCACTGTCCCTGCCTACTTCAACGACTCTCAACGTCAGGCTACCAAGGATG 440349 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAA 195827 ||| | ||||| || || ||| || | || ||||| || || || || ||||| | Sbjct 440350 CTGGTTTGATTGCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCTGCCA 440409 Query 195828 TTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCG 195887 |||| || ||||| |||||||| | | | || || || | ||||| || | | Sbjct 440410 TTGCCTACGGTCTTGACAAGAAGACCCAGGGTGAGCGCAACGTCCTCATCTTCGACTTGG 440469 Query 195888 GTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGG 195947 |||||||||| || |||||||| || | | |||||| | ||||| ||||| || ||| Sbjct 440470 GTGGTGGTACCTTCGATGTCTCCCTCTTGACTATTGAGGAGGGTATCTTCGAGGTCAAGT 440529 Query 195948 CTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC 196000 | ||||| ||||| ||||| | |||||||| || ||||| |||||| || Sbjct 440530 CCACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTTGTC 440582 Score = 95.1 bits (104), Expect = 2e-14 Identities = 221/330 (67%), Gaps = 4/330 (1%) Strand=Plus/Plus Query 198443 TACGCGATTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGT 198502 ||| || |||| || || | ||| |||| || ||||| || ||| || | || Sbjct 20019 TACCCGCTTCAGTGACGTGCACGGTTGCGACGAGGCCAAGGAAGAACTCCTAGATGTAGT 20078 Query 198503 TGATTTTCTTAAAAACCCCGAAAAGTACTATGGAAGTGGTGCCCGAATCCCACGTGGTGC 198562 || ||||| || ||||| || |||||| | | |||| | | |||| || | Sbjct 20079 CGACTTTCTCAAGAACCCGGACAAGTACAACAAACTCGGTGGCAGGCTCCCCAAGGGCGT 20138 Query 198563 TCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGA 198622 || |||| || | || |||||||||||||| || || ||||||||| ||| || || Sbjct 20139 CCTCCTCGTTGGCCCTCCCGGTACTGGTAAAACTCTGCTTGCTCGTGCTTGCGCTGGAGA 20198 Query 198623 ATCGAGTGTCCCCT--TTCTTCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGT 198680 | | | || |||| |||| || || || | | ||| ||| | | ||| ||| Sbjct 20199 AGCTGGCGTTCCCTTCTTCTACA-TG-TCTGGATCCGAATTCGACGAAGTCTACGTCGGT 20256 Query 198681 GTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATC 198740 ||||| ||||||||||| || |||||||| || ||| || ||| |||| Sbjct 20257 GTTGGAGCTAAGCGCGTTCGCGAACTCTTCTCTACTGCTCGTTCCAAGGCACCTGCTATC 20316 Query 198741 ATCTTCATTGATGAGATTGACGCTGTTGGT 198770 ||||||||||| ||| | |||||||| ||| Sbjct 20317 ATCTTCATTGACGAGCTGGACGCTGTAGGT 20346 >seq225 Length=197037 Score = 170 bits (188), Expect = 3e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || || || || ||||| || |||||| | ||||| || || Sbjct 138691 ATGCAAATCTTCGTCAAGACTCTCACAGGAAAGACCATCACCTTGGAGGTGGAATCCAGC 138750 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || ||||||| ||||| ||||| ||||| || || || ||| Sbjct 138751 GACACCATCGACAACGTAAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAG 138810 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || ||||||||||| || |||||||| ||||| |||||| | || |||||| Sbjct 138811 CAACGTCTCATCTTTGCTGGTAAGCAACTTGAAGACGGACGGACCCTCTCAGACTACAAC 138870 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||||||||| || || | || || | || || ||||| Sbjct 138871 ATCCAGAAGGAGTCTACACTCCATTTGGTGCTCCGTCTACGTGGTGG 138917 Score = 147 bits (162), Expect = 3e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || ||||| || || || |||||||| ||||| || || ||| |||| | Sbjct 138259 ACCGGCAAGACCATCACGCTTGAAGTCGAGTCGTCCGACACCATTGACAACGTCAAGTCG 138318 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||||||||| ||||| |||||||| || |||||||| || || ||||| || || || Sbjct 138319 AAGATTCAAGACAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATTTTCGCCGGAAAG 138378 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || || || ||||| || ||||| | || |||||| |||| |||||||| || || || Sbjct 138379 CAACTCGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTGCAT 138438 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || |||||| Sbjct 138439 CTCGTCCTGCGCCTGCGCGGTGGT 138462 >seq171 Length=1567143 Score = 138 bits (152), Expect = 1e-27 Identities = 226/326 (69%), Gaps = 6/326 (2%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||||||| || || | |||||| || | || || | || || || || Sbjct 245037 AAGATGAAGGAGACTGCCGAGTCCTACATGGGCAAGAACGTCAAGAACGCCGTCGTCACC 244978 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || || || || || || || |||||||||| | || || Sbjct 244977 GTCCCTGCCTACTTCAACGACTCCCAGCGTCAAGCTACCAAGGACGCTGGTCAAATCGCT 244918 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| ||| | || |||| ||||| || || || || |||| || ||||| Sbjct 244917 GGTCTCAACGTTCTCCGTGTTGTCAACGAACCCACTGCTGCCGCTCTTGCCTACGGTCTT 244858 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 |||||| || ||| || ||| ||| ||||| ||||||||||| || Sbjct 244857 GACAAGGCCACCGAC------AACGTCGTAGCTGTCTACGATCTTGGTGGTGGTACTTTC 244804 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||| |||| | ||| | ||| | |||| | || || || ||| | || ||||| Sbjct 244803 GATATCTCCATCCTCGAGATTCAGTCTGGTGTCTTTGAGGTCAAGTCCACCAACGGTGAC 244744 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || |||||||| || ||||| Sbjct 244743 ACTCACCTCGGTGGTGAGGACTTCGA 244718 >seq194 Length=621503 Score = 102 bits (112), Expect = 1e-16 Identities = 184/266 (69%), Gaps = 5/266 (2%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||||| || || || || || || |||||||| | ||| || Sbjct 567217 ACCGTCCCCGCCTACTTCAACGACAACCAGCGTCAAGCCACCAAGGACGCCGGTGCCATC 567158 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| ||| | || ||||| || || || || || || || ||||| ||| Sbjct 567157 GCTGGCCTGAACGTTCTCCGTATCATCAACGAGCCTACCGCCGCCGCTATCGCTTACGGT 567098 Query 195839 CT-GGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 || || | | ||| ||| | || | || || | |||| |||||||||||||| Sbjct 567097 CTCGGTTCCGGA-AAGTCTGACAAGGAGAGGAACGTCCTCATCTACGATCTCGGTGGTGG 567039 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||| || ||||| || ||||| | || | |||||| | ||| || ||||| || || Sbjct 567038 TACTTTCGATGTGTCTCTTCTTCACATCCAGGGTGGTGTCTTCACTGTCAAGGCCACCGC 566979 Query 195955 TGGTGATACTCATCTAGGTGGTGAAG 195980 |||||| || ||| | || ||| ||| Sbjct 566978 TGGTGACACCCATTTGGGCGGTCAAG 566953 >seq272 Length=11714 Score = 96.9 bits (106), Expect = 5e-15 Identities = 159/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608 || || || |||||| | || | || |||| ||||| |||||||| || || || Sbjct 9004 ATTCCCCGCGGTGCTATCCTGTCTGGATCCCCAGGTACAGGTAAAACGCTACTTGCCAAG 9063 Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGGC---GAGTTTCATC 198665 || | || || || ||| |||| || || |||||| | | ||||| ||||| | || Sbjct 9064 GCCACAGCTGGAGAGTCGGGTGTGCCATT-CTTCAGCG-TGAGCGGCTCTGAGTT-CGTC 9120 Query 198666 GAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAA 198725 |||||||| || ||||| || || || ||||| || || || | | || ||| | Sbjct 9121 GAGATGTTTGTGGGTGTCGGCGCCTCACGAGTCCGAGACCTATTCGCCAACGCTCGTAAG 9180 Query 198726 AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGT 198770 | | |||||| ||||||||||| ||||| ||||||||| | ||| Sbjct 9181 AGTACACCATGCATCATCTTCATCGATGAAATTGACGCTATCGGT 9225 >seq333 Length=639366 Score = 89.7 bits (98), Expect = 7e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 195881 GATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAA 195940 ||||||||||||||||| || ||||| || | |||| ||||| | || | ||||| Sbjct 304975 GATCTCGGTGGTGGTACTTTCGATGTATCTATCCTCACCATTGAGGAGGGCGTTTTCGAG 305034 Query 195941 GTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || |||| |||||||| |||||||| |||||||| || ||||| Sbjct 305035 GTTCAGTCTACCGCTGGTGACACTCATCTCGGTGGTGAGGACTTCGA 305081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858995562080