Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq296 269 3e-67
seq225 170 3e-37
seq171 138 1e-27
seq194 102 1e-16
seq272 96.9 5e-15
seq333 89.7 7e-13
>seq296
Length=470551
Score = 269 bits (298), Expect = 3e-67
Identities = 489/713 (69%), Gaps = 7/713 (1%)
Strand=Plus/Plus
Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349
||| | | |||||| || || ||| | || || || ||||| || || ||| | | |
Sbjct 439875 ATGGCACCAGCTATCGGAATTGATCTGGGTACCACGTACTCGTGCGTGGGTATCTTCCGC 439934
Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409
| || ||| | || || ||| | || ||||| || ||||| ||||| || || | ||||
Sbjct 439935 GACGACCGTATCGAAATCATCGCCAACGACCAGGGTAACCGCACAACACCCTCTTTCGTT 439994
Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469
||||| ||||| | || ||||| |||| || | || || || || || ||||||
Sbjct 439995 GCCTTCACAGACACCGAGCGTCTGATTGGTGACTCTGCGAAGAACCAAGTCGCCATGAAC 440054
Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529
|| |||| |||||||| ||||| ||||| || || || |||||||| | ||| | |
Sbjct 440055 CCCGTCAACACTGTCTTCGACGCAAAGCGCCTCATCGGCCGCAAGTTCGCCGATCAAGAG 440114
Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGC 195587
|| || | ||| || ||| ||| | | | ||| | || | | | ||| ||||
Sbjct 440115 GTTCAGGCCGACATGAAGCACTTCCCCT-TCAAGGTCGTCGACAAGGGCGGC----AAGC 440169
Query 195588 CTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGT 195647
| | || | || || || | || ||| |||| ||| | || || || || || |
Sbjct 440170 CAGTCATCCAGGTCGAGTTCAAGGGCGAGGAGAAGACATTCACCCCAGAGGAGATCTCAT 440229
Query 195648 CTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAG 195707
| ||||| | | ||||||| ||| ||||| || || | | | ||| || || ||
Sbjct 440230 CCATGGTCCTTACCAAGATGAGGGAAACTGCTGAGTCCTACCTCGGTGGCACCGTTAACA 440289
Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767
| || ||||| ||||| ||||| ||||||| || || ||||| ||||| || ||||| |
Sbjct 440290 ACGCTGTTGTCACTGTCCCTGCCTACTTCAACGACTCTCAACGTCAGGCTACCAAGGATG 440349
Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAA 195827
||| | ||||| || || ||| || | || ||||| || || || || ||||| |
Sbjct 440350 CTGGTTTGATTGCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCTGCCA 440409
Query 195828 TTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCG 195887
|||| || ||||| |||||||| | | | || || || | ||||| || | |
Sbjct 440410 TTGCCTACGGTCTTGACAAGAAGACCCAGGGTGAGCGCAACGTCCTCATCTTCGACTTGG 440469
Query 195888 GTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGG 195947
|||||||||| || |||||||| || | | |||||| | ||||| ||||| || |||
Sbjct 440470 GTGGTGGTACCTTCGATGTCTCCCTCTTGACTATTGAGGAGGGTATCTTCGAGGTCAAGT 440529
Query 195948 CTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC 196000
| ||||| ||||| ||||| | |||||||| || ||||| |||||| ||
Sbjct 440530 CCACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTTGTC 440582
Score = 95.1 bits (104), Expect = 2e-14
Identities = 221/330 (67%), Gaps = 4/330 (1%)
Strand=Plus/Plus
Query 198443 TACGCGATTCAAGGATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGT 198502
||| || |||| || || | ||| |||| || ||||| || ||| || | ||
Sbjct 20019 TACCCGCTTCAGTGACGTGCACGGTTGCGACGAGGCCAAGGAAGAACTCCTAGATGTAGT 20078
Query 198503 TGATTTTCTTAAAAACCCCGAAAAGTACTATGGAAGTGGTGCCCGAATCCCACGTGGTGC 198562
|| ||||| || ||||| || |||||| | | |||| | | |||| || |
Sbjct 20079 CGACTTTCTCAAGAACCCGGACAAGTACAACAAACTCGGTGGCAGGCTCCCCAAGGGCGT 20138
Query 198563 TCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGA 198622
|| |||| || | || |||||||||||||| || || ||||||||| ||| || ||
Sbjct 20139 CCTCCTCGTTGGCCCTCCCGGTACTGGTAAAACTCTGCTTGCTCGTGCTTGCGCTGGAGA 20198
Query 198623 ATCGAGTGTCCCCT--TTCTTCAGTGCTCCGCGGCGAGTTTCATCGAGATGTTCGTTGGT 198680
| | | || |||| |||| || || || | | ||| ||| | | ||| |||
Sbjct 20199 AGCTGGCGTTCCCTTCTTCTACA-TG-TCTGGATCCGAATTCGACGAAGTCTACGTCGGT 20256
Query 198681 GTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCAACCATGTATC 198740
||||| ||||||||||| || |||||||| || ||| || ||| ||||
Sbjct 20257 GTTGGAGCTAAGCGCGTTCGCGAACTCTTCTCTACTGCTCGTTCCAAGGCACCTGCTATC 20316
Query 198741 ATCTTCATTGATGAGATTGACGCTGTTGGT 198770
||||||||||| ||| | |||||||| |||
Sbjct 20317 ATCTTCATTGACGAGCTGGACGCTGTAGGT 20346
>seq225
Length=197037
Score = 170 bits (188), Expect = 3e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| || || || || || ||||| || |||||| | ||||| || ||
Sbjct 138691 ATGCAAATCTTCGTCAAGACTCTCACAGGAAAGACCATCACCTTGGAGGTGGAATCCAGC 138750
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| ||| | || ||||||| ||||| ||||| ||||| || || || |||
Sbjct 138751 GACACCATCGACAACGTAAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAG 138810
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
||||| || || ||||||||||| || |||||||| ||||| |||||| | || ||||||
Sbjct 138811 CAACGTCTCATCTTTGCTGGTAAGCAACTTGAAGACGGACGGACCCTCTCAGACTACAAC 138870
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
| || ||||||||||| || || | || || | || || |||||
Sbjct 138871 ATCCAGAAGGAGTCTACACTCCATTTGGTGCTCCGTCTACGTGGTGG 138917
Score = 147 bits (162), Expect = 3e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || || ||||| || || || |||||||| ||||| || || ||| |||| |
Sbjct 138259 ACCGGCAAGACCATCACGCTTGAAGTCGAGTCGTCCGACACCATTGACAACGTCAAGTCG 138318
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||||||||| ||||| |||||||| || |||||||| || || ||||| || || ||
Sbjct 138319 AAGATTCAAGACAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATTTTCGCCGGAAAG 138378
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
|| || || ||||| || ||||| | || |||||| |||| |||||||| || || ||
Sbjct 138379 CAACTCGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTGCAT 138438
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || | || || ||||||
Sbjct 138439 CTCGTCCTGCGCCTGCGCGGTGGT 138462
>seq171
Length=1567143
Score = 138 bits (152), Expect = 1e-27
Identities = 226/326 (69%), Gaps = 6/326 (2%)
Strand=Plus/Minus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
||||||||||||||||| || || | |||||| || | || || | || || || ||
Sbjct 245037 AAGATGAAGGAGACTGCCGAGTCCTACATGGGCAAGAACGTCAAGAACGCCGTCGTCACC 244978
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| ||||| ||||||| || || || || || || || |||||||||| | || ||
Sbjct 244977 GTCCCTGCCTACTTCAACGACTCCCAGCGTCAAGCTACCAAGGACGCTGGTCAAATCGCT 244918
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
||||| ||| ||| | || |||| ||||| || || || || |||| || |||||
Sbjct 244917 GGTCTCAACGTTCTCCGTGTTGTCAACGAACCCACTGCTGCCGCTCTTGCCTACGGTCTT 244858
Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901
|||||| || ||| || ||| ||| ||||| ||||||||||| ||
Sbjct 244857 GACAAGGCCACCGAC------AACGTCGTAGCTGTCTACGATCTTGGTGGTGGTACTTTC 244804
Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961
||| |||| | ||| | ||| | |||| | || || || ||| | || |||||
Sbjct 244803 GATATCTCCATCCTCGAGATTCAGTCTGGTGTCTTTGAGGTCAAGTCCACCAACGGTGAC 244744
Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| || |||||||| || |||||
Sbjct 244743 ACTCACCTCGGTGGTGAGGACTTCGA 244718
>seq194
Length=621503
Score = 102 bits (112), Expect = 1e-16
Identities = 184/266 (69%), Gaps = 5/266 (2%)
Strand=Plus/Minus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
|| || || || ||||||| || || || || || || |||||||| | ||| ||
Sbjct 567217 ACCGTCCCCGCCTACTTCAACGACAACCAGCGTCAAGCCACCAAGGACGCCGGTGCCATC 567158
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| || || ||| ||| | || ||||| || || || || || || || ||||| |||
Sbjct 567157 GCTGGCCTGAACGTTCTCCGTATCATCAACGAGCCTACCGCCGCCGCTATCGCTTACGGT 567098
Query 195839 CT-GGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894
|| || | | ||| ||| | || | || || | |||| ||||||||||||||
Sbjct 567097 CTCGGTTCCGGA-AAGTCTGACAAGGAGAGGAACGTCCTCATCTACGATCTCGGTGGTGG 567039
Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954
||| || ||||| || ||||| | || | |||||| | ||| || ||||| || ||
Sbjct 567038 TACTTTCGATGTGTCTCTTCTTCACATCCAGGGTGGTGTCTTCACTGTCAAGGCCACCGC 566979
Query 195955 TGGTGATACTCATCTAGGTGGTGAAG 195980
|||||| || ||| | || ||| |||
Sbjct 566978 TGGTGACACCCATTTGGGCGGTCAAG 566953
>seq272
Length=11714
Score = 96.9 bits (106), Expect = 5e-15
Identities = 159/225 (71%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608
|| || || |||||| | || | || |||| ||||| |||||||| || || ||
Sbjct 9004 ATTCCCCGCGGTGCTATCCTGTCTGGATCCCCAGGTACAGGTAAAACGCTACTTGCCAAG 9063
Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGGC---GAGTTTCATC 198665
|| | || || || ||| |||| || || |||||| | | ||||| ||||| | ||
Sbjct 9064 GCCACAGCTGGAGAGTCGGGTGTGCCATT-CTTCAGCG-TGAGCGGCTCTGAGTT-CGTC 9120
Query 198666 GAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAA 198725
|||||||| || ||||| || || || ||||| || || || | | || ||| |
Sbjct 9121 GAGATGTTTGTGGGTGTCGGCGCCTCACGAGTCCGAGACCTATTCGCCAACGCTCGTAAG 9180
Query 198726 AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGT 198770
| | |||||| ||||||||||| ||||| ||||||||| | |||
Sbjct 9181 AGTACACCATGCATCATCTTCATCGATGAAATTGACGCTATCGGT 9225
>seq333
Length=639366
Score = 89.7 bits (98), Expect = 7e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 195881 GATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAA 195940
||||||||||||||||| || ||||| || | |||| ||||| | || | |||||
Sbjct 304975 GATCTCGGTGGTGGTACTTTCGATGTATCTATCCTCACCATTGAGGAGGGCGTTTTCGAG 305034
Query 195941 GTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987
|| || |||| |||||||| |||||||| |||||||| || |||||
Sbjct 305035 GTTCAGTCTACCGCTGGTGACACTCATCTCGGTGGTGAGGACTTCGA 305081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657858995562080
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