Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq252 98.7 8e-16
>seq252
Length=295129
Score = 98.7 bits (108), Expect = 8e-16
Identities = 222/331 (67%), Gaps = 2/331 (1%)
Strand=Plus/Plus
Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377
|| || || ||||| | |||| | || | || |||||| |||||| || |||||
Sbjct 172774 TCGGTTTCAGGGTTCTTGCATTTCTTGCAGAGGACGAACTTGGAGATGAAGCCGTCAAGG 172833
Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437
|||||| | ||| || |||||| | ||||||| ||| | || |||| |||
Sbjct 172834 TAGTCCTGGAGCTTGCTGGCGTCGTGAGCACCGTTGATGATCCAGCGGTCGTCGTTGGGG 172893
Query 34438 -TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496
| | || || || || || || || |||| |||||||| | || | || ||
Sbjct 172894 CTAGTGTTG-GTCTGGGCTCCGAGTTCAAACCCAAAGTACTTGATGACGTGAGAGGGAGG 172952
Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556
|| | || | || | || || |||||| |||||||||||||||||||||||
Sbjct 172953 GCGGGCGAGGGAGCCAGCCACACTGGTCAGGTTGACAATGACAGTCTTGATGCCGTTGCC 173012
Query 34557 CTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCAC 34616
||| || || | ||| | ||| ||| ||| |||||||||||||| | ||| | ||
Sbjct 173013 CTTGCCCTCAATCTTAGACTGGATACGCTCCATCTTGTAGCGGTAGAAGGGGTCGGTGAC 173072
Query 34617 ATTGCGGTTAACGTTCACAGTCCCCATCGTG 34647
|| |||| || ||| || || |||| |||
Sbjct 173073 ATCGCGGCGAATGTTGACGGTAGCCATGGTG 173103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412839516956102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |