Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq252 98.7 8e-16 >seq252 Length=295129 Score = 98.7 bits (108), Expect = 8e-16 Identities = 222/331 (67%), Gaps = 2/331 (1%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || || || ||||| | |||| | || | || |||||| |||||| || ||||| Sbjct 172774 TCGGTTTCAGGGTTCTTGCATTTCTTGCAGAGGACGAACTTGGAGATGAAGCCGTCAAGG 172833 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 |||||| | ||| || |||||| | ||||||| ||| | || |||| ||| Sbjct 172834 TAGTCCTGGAGCTTGCTGGCGTCGTGAGCACCGTTGATGATCCAGCGGTCGTCGTTGGGG 172893 Query 34438 -TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496 | | || || || || || || || |||| |||||||| | || | || || Sbjct 172894 CTAGTGTTG-GTCTGGGCTCCGAGTTCAAACCCAAAGTACTTGATGACGTGAGAGGGAGG 172952 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 || | || | || | || || |||||| ||||||||||||||||||||||| Sbjct 172953 GCGGGCGAGGGAGCCAGCCACACTGGTCAGGTTGACAATGACAGTCTTGATGCCGTTGCC 173012 Query 34557 CTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCAC 34616 ||| || || | ||| | ||| ||| ||| |||||||||||||| | ||| | || Sbjct 173013 CTTGCCCTCAATCTTAGACTGGATACGCTCCATCTTGTAGCGGTAGAAGGGGTCGGTGAC 173072 Query 34617 ATTGCGGTTAACGTTCACAGTCCCCATCGTG 34647 || |||| || ||| || || |||| ||| Sbjct 173073 ATCGCGGCGAATGTTGACGGTAGCCATGGTG 173103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839516956102