Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq276 167 4e-35 seq403 161 2e-33 seq278 131 3e-24 seq393 118 2e-20 seq274 102 1e-15 >seq276 Length=361267 Score = 167 bits (184), Expect = 4e-35 Identities = 127/150 (85%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 ||||||||||| | ||||| ||| | |||||||||||||||||||||||||||||| Sbjct 257984 AGGTCGACCAAGAGATGCTCTTCGAGATCATCCTCGCCGCCAACTACCTCGACATCAAGG 257925 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 |||| ||||| |||| |||||||| || |||||| | |||||||||||||||||||| | Sbjct 257924 CCCTGCTCGACGTGGGCTGCAAGACTGTCGCCAACATGATCAAGGGCAAGTCGCCCGACG 257865 Query 2035732 ACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||||||| || |||||| || ||| Sbjct 257864 AGATCCGCAAGACGTTCAACATCCAGAACG 257835 >seq403 Length=285126 Score = 161 bits (178), Expect = 2e-33 Identities = 237/331 (72%), Gaps = 12/331 (4%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 107388 TGACACCGGCCTTTTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAA 107447 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||||| |||||| | ||| ||||||| | ||||| ||| | |||| Sbjct 107448 GCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGGGGTTGCCGA 107507 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | ||||| |||||||||||||| |||||||||||||||||||| | |||||||| Sbjct 107508 GAGCAAGGAGCAGACGGTCGGCGACGAACTCAATGTACTGGCACATGAGAGTGGCGTTCA 107567 Query 794071 TGCC--GATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||| || |||||| | || |||| ||||||| ||||| | ||| |||||||| || Sbjct 107568 TGCCGAGAAGAGCGCAA--GGAAGCGCGTCGCTGAGGAACTCCTGCTCAATCTCGACAGC 107625 Query 794129 CTCGATGATGATCTGCCTGGGCA----CGTCGGACGACGGCTTGTCGACGAGCATCGTGT 794184 ||| ||||||| |||| | || | | | | | |||| || ||| | | Sbjct 107626 TTCGGTGATGAT-AGCCTCGACAGCAGCCTTGCTGGGGCGGTTGTTGAGGAG---AGAGA 107681 Query 794185 AGAGCAGGCAGGCAAAGTCGCAATGCAGACC 794215 |||||||||||||||||||| |||| ||| Sbjct 107682 AGAGCAGGCAGGCAAAGTCGGTGTGCATACC 107712 Score = 95.1 bits (104), Expect = 2e-13 Identities = 145/206 (70%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 |||||||| | ||| || || | |||||| || ||| |||||| || ||||| Sbjct 108086 GCCTCGGGAATTTGTACTTCGCTGGAGAAGCGTTCGACCAAGTTCTCGTTGACAATGCCA 108145 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGA-- 796267 || ||||||||||||||| ||||| || ||| || |||||||||||| | | Sbjct 108146 TCCGAGGCGGCGAAAAAGGCAAGGACATGGGAGATGAAAAAGCGCTCGTCGTCGTTCAAT 108205 Query 796268 -GCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 || | ||||| | ||| | ||| || | ||||||||||||||| || || Sbjct 108206 CGCTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGAA 108265 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCA 796352 ||||||||||| |||||||| | ||| Sbjct 108266 GCCTCGGCCTTCTTGTACATTTGCCA 108291 >seq278 Length=203197 Score = 131 bits (144), Expect = 3e-24 Identities = 194/270 (72%), Gaps = 5/270 (2%) Strand=Plus/Minus Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445 || ||||||||| ||| ||| |||||||||||| ||| ||| || || || || ||| Sbjct 35440 TCGATCTTGGAGTCGGGGTCGGAGGCGCTCATCTTTCCGCCCT--GT-AGACCGGGAACC 35384 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505 | ||||| | ||||||| ||| | |||||| | | |||| | ||| || Sbjct 35383 ATGGGGTTCATCAGGTGGGCGCGTTCCTTGTAGCCGATCTTGGGCAAGACGTCCTTTGCG 35324 Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565 | ||| ||||||||||||||||| || || || || |||| || ||||||| |||| Sbjct 35323 AGGGCGAAGATCTTGCGCTGGTCAACACCACCGAATTGAACGTCTACATCGAGGTACTGC 35264 Query 2411566 TCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT-GCGGTCCAT 2411624 ||||| || || |||||||||||||||| ||| || ||||||| ||| | || | Sbjct 35263 TCGTCAAGCGCTTGCATGAGCGGGTAGATGAGTCCACTTAGCGGCGCGTTCTCTGT-CTG 35205 Query 2411625 CTTGACCACCTGGGCGGCGGCCTTTTGCGC 2411654 |||||| || | ||| | ||||| | ||| Sbjct 35204 CTTGACGACTTCGGCACCAGCCTTCTTCGC 35175 >seq393 Length=255347 Score = 118 bits (130), Expect = 2e-20 Identities = 182/260 (70%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| ||||| || |||| ||| | || ||||||||||| | || ||||| || Sbjct 191812 CTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTTGA 191753 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||||| | | ||||| ||| | ||| || | ||| || | || Sbjct 191752 TGTTCCGTTGGTGCCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTGGACGTTGAGACC 191693 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || ||||| || | ||||||||| | ||||| | || || || ||||||||||| || Sbjct 191692 AATACCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTC 191633 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||| |||||||||| | || ||||| || || | || || | ||||| Sbjct 191632 GATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCC 191573 Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799 || ||||| || || |||| Sbjct 191572 TGCGTTGAACAGGGTTGGCG 191553 Score = 109 bits (120), Expect = 9e-18 Identities = 292/449 (65%), Gaps = 20/449 (4%) Strand=Plus/Minus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631 ||| ||| | ||||||||| ||||||| | || ||||||||||||||| |||||| Sbjct 192251 ACTCGACAATCTCGGTGCAGAGGTTGGAG--CTGCGAATGGTGCCCAGGTTCTTCTGGTT 192194 Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691 ||| | ||||| || ||||||| ||||| |||| ||| ||||| |||| || Sbjct 192193 GCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGAGC 192134 Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNN 2071751 | | ||| || |||| | | | ||| | |||| || ||||||||| Sbjct 192133 CTCAAGGATAGCATACCACAGCTTCTGGGCGCGAACCG------TCTCGCGGCCCTTGTT 192080 Query 2071752 NNNNNNNNNNNNNN------AGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCC 2071805 | || || || || || |||||| | ||| || || Sbjct 192079 TTGCTTCTCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACC 192020 Query 2071806 GGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCG--CCAGTCACCACGCGGCGCATA 2071863 || |||| ||||| | || | ||| |||||| | | ||||| | || Sbjct 192019 AGGGCACTCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTTGGACACGCTTC--ATG 191962 Query 2071864 AACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCG 2071923 |||| |||| ||||||| |||| ||||||||||| || || ||||||||| ||| Sbjct 191961 AACAAGTCGGGAATCCACAGAGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTTCCG 191902 Query 2071924 TGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAG 2071983 |||||||| |||||| || || | | || || |||||||| ||||| |||||| | Sbjct 191901 TGGTTCTTGCGCAGGTCCAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATG 191842 Query 2071984 GCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 |||||||| || ||||||| ||| || Sbjct 191841 GCAAAGGCACCTGGGCGCTTGTTGCCACC 191813 Score = 87.8 bits (96), Expect = 3e-11 Identities = 328/509 (64%), Gaps = 24/509 (5%) Strand=Plus/Minus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 ||||||||||| || || || | | || ||| | | ||| || || ||||||||||| Sbjct 193212 TGGTCGACGGTGAATTGAATAGGGGCGGAGGCGGCCATGGTACGGAGGTAGTACATGCCC 193153 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGG 2069370 ||||| || || | ||| | ||||||||||||||| || | | | || Sbjct 193152 GTCTTAAGACCAAGCTTCCATCCAGCAAAGTGCATCGACGTGAT---CTTGCCCAT--GG 193098 Query 2069371 ACGGCACA-----GTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGG 2069425 ||| | || || ||| | ||||||| |||||||| | ||| | ||||||| Sbjct 193097 TAGGCTCCTTCATGTGGATGTTCAACGACTGGGACTGGTCGATAAAGGCACCACGGTCGG 193038 Query 2069426 CCGCCATGTCGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGA 2069485 | ||||| |||||| | ||| | || | ||||| || |||||| | || ||||| Sbjct 193037 CAGCCATCTCGATGATTCTGCGCTGCGAGATTTCCCAAACAGTCTTGTAAAGCTCCTTG- 192979 Query 2069486 GATGCGGCGGCACCTCGTCGTCATCA--AAGCCCTGCACCG-AGCCCTGCGCTGCGATGA 2069542 | | | ||| | || || | |||| | | || | | ||||||| Sbjct 192978 --------GTCTCATCGGGGATATTGGGAATTCGTGCAATGGAACCACCCTCGGCGATGA 192927 Query 2069543 GGCGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGC 2069602 ||||| | || | ||||||||| | | | | || || ||| Sbjct 192926 TGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACAAGGTCCTTGAGCAGCCATG 192867 Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATG 2069661 |||||||||| || || || | |||||| ||||| | ||| |||||| ||| ||| Sbjct 192866 GGTTGACCACCTGGAACTCACCAGCGAGCACACGGCGAGAGTAAATGTTGGAAGTGTATG 192807 Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 2069721 | ||| | |||| |||| || || |||||||| || | ||| || |||||| | || Sbjct 192806 GC-TCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTGGCATGGGTGCG 192748 Query 2069722 ACGAGCAGCGAGTTGCGCAGGCCGTACTG 2069750 | ||||||||||||||| | |||| ||| Sbjct 192747 ATGAGCAGCGAGTTGCGGACACCGTGCTG 192719 >seq274 Length=431314 Score = 102 bits (112), Expect = 1e-15 Identities = 265/402 (66%), Gaps = 4/402 (1%) Strand=Plus/Plus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062 || ||||||||||| || | | | ||||| ||| || | || || || || | Sbjct 390364 GATGGCAACATGCCACACATGATCATCTCGGGCATGCCAGGTATCGGAAAAACAACCTCC 390423 Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122 ||| ||||| || ||| || | |||| ||| | | || ||||| |||||||| Sbjct 390424 ATCCTCTGCCTCGCCCGCCAACTTCTCGGCGACGCCTACAAAGAAGCCGTTCTCGAACTG 390483 Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCTTCG 2019182 || || || |||||||| || | || ||||| || | ||||||| | ||| | Sbjct 390484 AACGCCTCCGACGAGCGTGGTATTGATGTCGTCCGCAATCGCATCAAGGGTTTCGCACAG 390543 Query 2019183 AAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGC 2019242 || | || || | || || | || ||| || ||||||||||||| |||||| | Sbjct 390544 AAGAAGGTCACACTAGCACCGGGTAGGCAAAAGCTGGTCATCCTCGATGAAGCCGACAGT 390603 Query 2019243 CTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACA--CCAACACGA 2019300 | ||| | || || ||||||||| | ||||||||| | |||| ||||| | Sbjct 390604 ATGACGAGTGGTGCGCAACAGGCCCTCAGGAGGACCATGGAGATTTACAGTTCAACA--A 390661 Query 2019301 CGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTT 2019360 | || || || | || ||||| | | | | |||||||| | || ||| | | Sbjct 390662 CCCGCTTCGCCTTTGCTTGCAATCAGCCCAACAAGATCATCGAACCGCTACAGTCGAGAT 390721 Query 2019361 GCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCG 2019402 ||||||| | || | ||| ||||||||||| |||||| ||| Sbjct 390722 GCGCCATTCTCCGTTATGCCCGCCTCACCGATGCCCAGGTCG 390763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916202360931746