Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq276 167 4e-35
seq403 161 2e-33
seq278 131 3e-24
seq393 118 2e-20
seq274 102 1e-15
>seq276
Length=361267
Score = 167 bits (184), Expect = 4e-35
Identities = 127/150 (85%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671
||||||||||| | ||||| ||| | ||||||||||||||||||||||||||||||
Sbjct 257984 AGGTCGACCAAGAGATGCTCTTCGAGATCATCCTCGCCGCCAACTACCTCGACATCAAGG 257925
Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731
|||| ||||| |||| |||||||| || |||||| | |||||||||||||||||||| |
Sbjct 257924 CCCTGCTCGACGTGGGCTGCAAGACTGTCGCCAACATGATCAAGGGCAAGTCGCCCGACG 257865
Query 2035732 ACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| ||||||||||| || |||||| || |||
Sbjct 257864 AGATCCGCAAGACGTTCAACATCCAGAACG 257835
>seq403
Length=285126
Score = 161 bits (178), Expect = 2e-33
Identities = 237/331 (72%), Gaps = 12/331 (4%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | |
Sbjct 107388 TGACACCGGCCTTTTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAA 107447
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||||| |||||| | ||| ||||||| | ||||| ||| | ||||
Sbjct 107448 GCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGGGGTTGCCGA 107507
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | ||||| |||||||||||||| |||||||||||||||||||| | ||||||||
Sbjct 107508 GAGCAAGGAGCAGACGGTCGGCGACGAACTCAATGTACTGGCACATGAGAGTGGCGTTCA 107567
Query 794071 TGCC--GATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
|||| || |||||| | || |||| ||||||| ||||| | ||| |||||||| ||
Sbjct 107568 TGCCGAGAAGAGCGCAA--GGAAGCGCGTCGCTGAGGAACTCCTGCTCAATCTCGACAGC 107625
Query 794129 CTCGATGATGATCTGCCTGGGCA----CGTCGGACGACGGCTTGTCGACGAGCATCGTGT 794184
||| ||||||| |||| | || | | | | | |||| || ||| | |
Sbjct 107626 TTCGGTGATGAT-AGCCTCGACAGCAGCCTTGCTGGGGCGGTTGTTGAGGAG---AGAGA 107681
Query 794185 AGAGCAGGCAGGCAAAGTCGCAATGCAGACC 794215
|||||||||||||||||||| |||| |||
Sbjct 107682 AGAGCAGGCAGGCAAAGTCGGTGTGCATACC 107712
Score = 95.1 bits (104), Expect = 2e-13
Identities = 145/206 (70%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
|||||||| | ||| || || | |||||| || ||| |||||| || |||||
Sbjct 108086 GCCTCGGGAATTTGTACTTCGCTGGAGAAGCGTTCGACCAAGTTCTCGTTGACAATGCCA 108145
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGA-- 796267
|| ||||||||||||||| ||||| || ||| || |||||||||||| | |
Sbjct 108146 TCCGAGGCGGCGAAAAAGGCAAGGACATGGGAGATGAAAAAGCGCTCGTCGTCGTTCAAT 108205
Query 796268 -GCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326
|| | ||||| | ||| | ||| || | ||||||||||||||| || ||
Sbjct 108206 CGCTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGAA 108265
Query 796327 GCCTCGGCCTTTTTGTACATCTCCCA 796352
||||||||||| |||||||| | |||
Sbjct 108266 GCCTCGGCCTTCTTGTACATTTGCCA 108291
>seq278
Length=203197
Score = 131 bits (144), Expect = 3e-24
Identities = 194/270 (72%), Gaps = 5/270 (2%)
Strand=Plus/Minus
Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445
|| ||||||||| ||| ||| |||||||||||| ||| ||| || || || || |||
Sbjct 35440 TCGATCTTGGAGTCGGGGTCGGAGGCGCTCATCTTTCCGCCCT--GT-AGACCGGGAACC 35384
Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505
| ||||| | ||||||| ||| | |||||| | | |||| | ||| ||
Sbjct 35383 ATGGGGTTCATCAGGTGGGCGCGTTCCTTGTAGCCGATCTTGGGCAAGACGTCCTTTGCG 35324
Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565
| ||| ||||||||||||||||| || || || || |||| || ||||||| ||||
Sbjct 35323 AGGGCGAAGATCTTGCGCTGGTCAACACCACCGAATTGAACGTCTACATCGAGGTACTGC 35264
Query 2411566 TCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT-GCGGTCCAT 2411624
||||| || || |||||||||||||||| ||| || ||||||| ||| | || |
Sbjct 35263 TCGTCAAGCGCTTGCATGAGCGGGTAGATGAGTCCACTTAGCGGCGCGTTCTCTGT-CTG 35205
Query 2411625 CTTGACCACCTGGGCGGCGGCCTTTTGCGC 2411654
|||||| || | ||| | ||||| | |||
Sbjct 35204 CTTGACGACTTCGGCACCAGCCTTCTTCGC 35175
>seq393
Length=255347
Score = 118 bits (130), Expect = 2e-20
Identities = 182/260 (70%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| ||||| || |||| ||| | || ||||||||||| | || ||||| ||
Sbjct 191812 CTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTTGA 191753
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||||||||| | | ||||| ||| | ||| || | ||| || | ||
Sbjct 191752 TGTTCCGTTGGTGCCGCCAATGTAGGAGCCGGTGGCACGGATTCGGTGGACGTTGAGACC 191693
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| ||||| || | ||||||||| | ||||| | || || || ||||||||||| ||
Sbjct 191692 AATACCGCCAGCGGTCTTGGAGATCAAAGCGCAAGTCTTGAGTGTGTCGTAGATGCCGTC 191633
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| ||| |||||||||| | || ||||| || || | || || | |||||
Sbjct 191632 GATGCTGTCTTCCTTCATGTCGATGAGGAAGCAGGAGGACATCTGGGGTGATGGTGTGCC 191573
Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799
|| ||||| || || ||||
Sbjct 191572 TGCGTTGAACAGGGTTGGCG 191553
Score = 109 bits (120), Expect = 9e-18
Identities = 292/449 (65%), Gaps = 20/449 (4%)
Strand=Plus/Minus
Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTT 2071631
||| ||| | ||||||||| ||||||| | || ||||||||||||||| ||||||
Sbjct 192251 ACTCGACAATCTCGGTGCAGAGGTTGGAG--CTGCGAATGGTGCCCAGGTTCTTCTGGTT 192194
Query 2071632 GCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGC 2071691
||| | ||||| || ||||||| ||||| |||| ||| ||||| |||| ||
Sbjct 192193 GCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGAGC 192134
Query 2071692 CGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCGCGGCCCTNNNN 2071751
| | ||| || |||| | | | ||| | |||| || |||||||||
Sbjct 192133 CTCAAGGATAGCATACCACAGCTTCTGGGCGCGAACCG------TCTCGCGGCCCTTGTT 192080
Query 2071752 NNNNNNNNNNNNNN------AGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCC 2071805
| || || || || || |||||| | ||| || ||
Sbjct 192079 TTGCTTCTCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACC 192020
Query 2071806 GGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCG--CCAGTCACCACGCGGCGCATA 2071863
|| |||| ||||| | || | ||| |||||| | | ||||| | ||
Sbjct 192019 AGGGCACTCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTTGGACACGCTTC--ATG 191962
Query 2071864 AACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCG 2071923
|||| |||| ||||||| |||| ||||||||||| || || ||||||||| |||
Sbjct 191961 AACAAGTCGGGAATCCACAGAGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTTCCG 191902
Query 2071924 TGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAG 2071983
|||||||| |||||| || || | | || || |||||||| ||||| |||||| |
Sbjct 191901 TGGTTCTTGCGCAGGTCCAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATG 191842
Query 2071984 GCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012
|||||||| || ||||||| ||| ||
Sbjct 191841 GCAAAGGCACCTGGGCGCTTGTTGCCACC 191813
Score = 87.8 bits (96), Expect = 3e-11
Identities = 328/509 (64%), Gaps = 24/509 (5%)
Strand=Plus/Minus
Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310
||||||||||| || || || | | || ||| | | ||| || || |||||||||||
Sbjct 193212 TGGTCGACGGTGAATTGAATAGGGGCGGAGGCGGCCATGGTACGGAGGTAGTACATGCCC 193153
Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGG 2069370
||||| || || | ||| | ||||||||||||||| || | | | ||
Sbjct 193152 GTCTTAAGACCAAGCTTCCATCCAGCAAAGTGCATCGACGTGAT---CTTGCCCAT--GG 193098
Query 2069371 ACGGCACA-----GTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGG 2069425
||| | || || ||| | ||||||| |||||||| | ||| | |||||||
Sbjct 193097 TAGGCTCCTTCATGTGGATGTTCAACGACTGGGACTGGTCGATAAAGGCACCACGGTCGG 193038
Query 2069426 CCGCCATGTCGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGA 2069485
| ||||| |||||| | ||| | || | ||||| || |||||| | || |||||
Sbjct 193037 CAGCCATCTCGATGATTCTGCGCTGCGAGATTTCCCAAACAGTCTTGTAAAGCTCCTTG- 192979
Query 2069486 GATGCGGCGGCACCTCGTCGTCATCA--AAGCCCTGCACCG-AGCCCTGCGCTGCGATGA 2069542
| | | ||| | || || | |||| | | || | | |||||||
Sbjct 192978 --------GTCTCATCGGGGATATTGGGAATTCGTGCAATGGAACCACCCTCGGCGATGA 192927
Query 2069543 GGCGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGC 2069602
||||| | || | ||||||||| | | | | || || |||
Sbjct 192926 TGCGGTTCTTCATGTTCTCAGACCACAGGCCCATGTCGACAAGGTCCTTGAGCAGCCATG 192867
Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-ATG 2069661
|||||||||| || || || | |||||| ||||| | ||| |||||| ||| |||
Sbjct 192866 GGTTGACCACCTGGAACTCACCAGCGAGCACACGGCGAGAGTAAATGTTGGAAGTGTATG 192807
Query 2069662 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCC 2069721
| ||| | |||| |||| || || |||||||| || | ||| || |||||| | ||
Sbjct 192806 GC-TCGAAGCACTCGTTGTTTCCGAGAATCTGCGAGGTGGAGGCAGTTGGCATGGGTGCG 192748
Query 2069722 ACGAGCAGCGAGTTGCGCAGGCCGTACTG 2069750
| ||||||||||||||| | |||| |||
Sbjct 192747 ATGAGCAGCGAGTTGCGGACACCGTGCTG 192719
>seq274
Length=431314
Score = 102 bits (112), Expect = 1e-15
Identities = 265/402 (66%), Gaps = 4/402 (1%)
Strand=Plus/Plus
Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062
|| ||||||||||| || | | | ||||| ||| || | || || || || |
Sbjct 390364 GATGGCAACATGCCACACATGATCATCTCGGGCATGCCAGGTATCGGAAAAACAACCTCC 390423
Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122
||| ||||| || ||| || | |||| ||| | | || ||||| ||||||||
Sbjct 390424 ATCCTCTGCCTCGCCCGCCAACTTCTCGGCGACGCCTACAAAGAAGCCGTTCTCGAACTG 390483
Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCTTCG 2019182
|| || || |||||||| || | || ||||| || | ||||||| | ||| |
Sbjct 390484 AACGCCTCCGACGAGCGTGGTATTGATGTCGTCCGCAATCGCATCAAGGGTTTCGCACAG 390543
Query 2019183 AAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGC 2019242
|| | || || | || || | || ||| || ||||||||||||| |||||| |
Sbjct 390544 AAGAAGGTCACACTAGCACCGGGTAGGCAAAAGCTGGTCATCCTCGATGAAGCCGACAGT 390603
Query 2019243 CTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACA--CCAACACGA 2019300
| ||| | || || ||||||||| | ||||||||| | |||| ||||| |
Sbjct 390604 ATGACGAGTGGTGCGCAACAGGCCCTCAGGAGGACCATGGAGATTTACAGTTCAACA--A 390661
Query 2019301 CGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTT 2019360
| || || || | || ||||| | | | | |||||||| | || ||| | |
Sbjct 390662 CCCGCTTCGCCTTTGCTTGCAATCAGCCCAACAAGATCATCGAACCGCTACAGTCGAGAT 390721
Query 2019361 GCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCG 2019402
||||||| | || | ||| ||||||||||| |||||| |||
Sbjct 390722 GCGCCATTCTCCGTTATGCCCGCCTCACCGATGCCCAGGTCG 390763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916202360931746
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |