Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq393 367 1e-96 seq403 161 1e-34 seq225 127 2e-24 seq385 87.8 2e-12 >seq393 Length=255347 Score = 367 bits (406), Expect = 1e-96 Identities = 1148/1748 (66%), Gaps = 65/1748 (4%) Strand=Plus/Minus Query 148047 TTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTC-G 148105 || ||||||||| |||||| || || || |||||||| || ||||| || |||| || | Sbjct 193077 TTCAACGACTGGGACTGGTCGATAAAGGCACCACGGTCGGCAGCCATCTCGATGATTCTG 193018 Query 148106 CTTTATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTC 148165 | | | || ||||| | |||||||| ||| |||| | | |||||| || | Sbjct 193017 CGCTG-CGAGATTTCCCAAACAGTCTTGTAAAGCTCCTTGGTCTCATCGGGGATATTGGG 192959 Query 148166 GATGCGCTGCACCG-AGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATA 148224 || || |||| | | || | | || | || | || ||| | || | | | Sbjct 192958 AATTCG-TGCAATGGAACCACCCTCGGCGATGATGCGGTTCTTCATGTTCTCAGACCACA 192900 Query 148225 GGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGA 148284 || | |||| ||||| | || ||| | | || |||||||| ||||| || |||| Sbjct 192899 GGCCCATGTCGACAAGGTCCTTGAGCAGCCATGGGTTGACCACCTGGAACTCACCAGCGA 192840 Query 148285 GCACGCGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAA 148343 |||| || || ||| || | |||| || | || || || |||||||||| || | | Sbjct 192839 GCACACGGCG-AGAGTAAATGTTGGAAGTGTATGGCTCGAAGCACTCGTTGTTTCCGAGA 192781 Query 148344 ATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGA 148403 ||||||| ||| | || || |||||| || | |||||||||||||| | |||| | Sbjct 192780 ATCTGCGAGGTGGAGGCAGTTGGCATGGGTGCGATGAGCAGCGAGTTGCGGACACCGTGC 192721 Query 148404 TTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCAC 148463 | || ||| ||| || | ||||||||||||| | || ||| | |||| Sbjct 192720 TGGGCAATCTTGGCCTTGAGCTCATCCCAGTCCCAGAGATCGGTAGGGGTCTTCTCCCAC 192661 Query 148464 ATGTCGTACTGCAGAATGCCGC-GGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCC 148522 ||||||||||| |||||||| || | || | | |||||||| | ||| || || Sbjct 192660 ATGTCGTACTGGAGAATGCCCTTGGAGACAGGAGAT-CCCTCGTAGGTCTCGTAAGGACC 192602 Query 148523 GTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAAT 148582 | || || | |||||| || || ||| ||| ||| || |||||| || Sbjct 192601 AAGTTCCTTGGCAATATCGCAGGACGAAGTCAGAGCGGCGTGGTAGATGGTCTCGAAGAT 192542 Query 148583 TTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGC 148642 || |||||||| | ||| | | ||| | |||| ||||| | || || Sbjct 192541 CTGAATGTTGAGCTTCTTGGCCTGGTTGGACTCGAAGGGCAGGCGCAGGGCGAGGAAAGC 192482 Query 148643 GTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGC 148702 ||||| || |||||||| |||| ||||| || ||||| | |||| | ||||||| Sbjct 192481 ATCGGCCAGACCCTGTACACCCATACCAATAGGTCGGTGGCGGAAGTTGCTGCGGCGCGC 192422 Query 148703 GCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCT 148761 ||| | || ||||||||| || || ||||||| |||| ||||| || || | Sbjct 192421 CTCCTCAACGGGGTAGTGGTTGACCTCAATAATCTTGTTCAAG-TTGCGGGTGACGACTT 192363 Query 148762 TTGTAATTCTGCGCAGC------AATTCAAAATCGTA---CTTGTCATCTACGA-TGCAT 148811 |||| | ||||| || ||||| ||| ||||| || || | || | Sbjct 192362 GGGTAACCTCGTGCAGCTTTTGAAAGTCAAACTCGCCGCGCTTGTAGTCGACAAATGAA- 192304 Query 148812 CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCT 148871 || || |||| || || || ||||| || || |||||| || || ||||||| Sbjct 192303 -GG--CAGAGCGAGCGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGCAGTGTACTCG 192247 Query 148872 ACGATCTCGGCGCACAGATTG---CTGCATTTGATCACGCCCACGTTCTTTTGATTGCTC 148928 || ||||||| ||| || ||| |||| || | ||||| |||||| || |||||| Sbjct 192246 ACAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGT---GCCCAGGTTCTTCTGGTTGCTC 192190 Query 148929 TTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCC 148988 |||| |||||| || |||||||| ||||| | || ||||| || ||| | || Sbjct 192189 TTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGAGCCTCA 192130 Query 148989 ACTATGAACCGATG-CAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTC------ 149041 | || | | | ||| | ||| ||||| || | |||| || |||| Sbjct 192129 AGGAT-AGCATACCACAGCTTCTGGGCGCGAAC---CGTCTCG---CGGCCCTTGTTTTG 192077 Query 149042 CTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGG 149101 || |||||| |||||| |||||| | ||||||||| |||| | ||||| || Sbjct 192076 CTTCTCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACCAGG 192017 Query 149102 GCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAG 149161 ||||| || |||||||| || | ||| |||||| | | | || |||||||| |||| Sbjct 192016 GCACTCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTTGGACACGCTTCATGAACAA 191957 Query 149162 ATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTT 149221 ||||| | ||| || ||||| | ||| ||||| || || || || ||| Sbjct 191956 GTCGGGAATCCACAGAGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTTCCGTGGTT 191897 Query 149222 GCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAG 149281 |||||||| || | || || | || |||||||| ||||||| ||| | || | Sbjct 191896 CTTGCGCAGGTCCAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAA 191837 Query 149282 CGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCG 149338 || || ||||||| || ||||||||||||| ||| | ||||||| | || || Sbjct 191836 GGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACG 191777 Query 149339 AACCATAGGTTCAATGCCACTG---GCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCG 149395 | ||| || |||| || | | || ||||| || || |||| |||| Sbjct 191776 GAGCATGGG---AATGAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTAGGAGCCGGT 191720 Query 149396 CGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA 149455 || || | | ||| ||||||| || || ||||| || ||| ||||| ||||| Sbjct 191719 GGCACGGATTCGGTGGACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCGCA 191660 Query 149456 -GTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGC 149514 ||| ||| || ||||||||| ||||||||||| ||||||| | || |||| Sbjct 191659 AGTCTT-GAGTGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTCATGTCGATGAGGAAGC 191601 Query 149515 ACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAA 149574 | ||| |||| || || | | ||||| || ||||| ||| || ||||||||||| Sbjct 191600 AGGAGGACATCTGGGGTGATGGTGTGCCTGCGTTGAACAGGGTTGGCGAGGCGTGTGTAA 191541 Query 149575 AATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGA 149634 | || || || ||| ||||| | ||| | | || ||||||||||| || | Sbjct 191540 AGTACTTTTGCGACATGTAGTCGTAAGTCTCAATGGCCTTTTCAATGTCATCGCCGTGTA 191481 Query 149635 TGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTG---TTTCCAA 149691 |||| | ||| || ||||| ||||| || || || ||||| || || ||| ||| || Sbjct 191480 TGCCGACGGCAACTCGCATGAGCATGTGTTGTGGGCGCTCGGCAACCTTGCCATTTACA- 191422 Query 149692 TTTTGAGCAAGTAG--CCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTC 149749 ||| | |||| ||| || || |||||| |||| ||| ||| ||||| ||||| Sbjct 191421 --CGGAGGAGGTAGGACCG--CTCGAGCGTCTTGAAGCCGAAGAACTGGTAGTTGAAGTC 191366 Query 149750 GCGGCCGT 149757 ||| ||| Sbjct 191365 TCGGTCGT 191358 >seq403 Length=285126 Score = 161 bits (178), Expect = 1e-34 Identities = 349/515 (68%), Gaps = 13/515 (3%) Strand=Plus/Plus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||| || || || || ||||| || ||||| || ||||| | | ||| ||||| | ||| Sbjct 107404 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCAT 107463 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473 || ||||| |||||| | ||||| |||| || || | ||| | | |||||| || Sbjct 107464 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGGGGTTGCCGAGAGCAAGGAGCAGACG 107523 Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACGCCA 120532 ||| || || ||||||||||||| ||||||| || || ||||||||||| || | || Sbjct 107524 GTCGGCGACGAACTCAATGTACTGGCACATGAGAGTG-GCGTTCATGCCGAGAAGAGCGC 107582 Query 120533 CCGGCAACGCCGACG-TGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG-- 120589 || | || || || ||| ||||||| |||||| || || || || ||| || | Sbjct 107583 AAGGAAGCG-CGTCGCTGAGGAACTCCTGCTCAATCTCGACAGCTTCGGTGATGATAGCC 107641 Query 120590 -CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCA 120648 ||| || | || ||| ||| | || | | | | || |||||| ||| Sbjct 107642 TCGACAGCAGCCTTGCTGGGGCGGTTG---TTGAGGAGAG---AGAAGAGCAGGCAGGCA 107695 Query 120649 AAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGC 120708 ||||| ||||||| |||||||| || || || ||||||||| || || || |||||| Sbjct 107696 AAGTCGGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGC 107755 Query 120709 ATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCC 120768 |||| || | |||| | |||| |||| ||| || || ||||| | ||| Sbjct 107756 ATGAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGAACCGCTGAAGAAGATACCC 107815 Query 120769 TCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCAC 120828 || ||| |||||| ||||| | || | ||| || || | ||||| |||||| Sbjct 107816 TCAACGGCGGCAAACGCGACAAGACGGTTGGCAAAGGTGGAGTTCTTGTCAGAGATCCAT 107875 Query 120829 TTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 | ||||| || ||||| ||||| | ||| || Sbjct 107876 CGAAGAGCCCAATCAGCCTTCTTGCGGATGCAGGG 107910 >seq225 Length=197037 Score = 127 bits (140), Expect = 2e-24 Identities = 153/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||||||||| ||||| || ||||| |||| || || ||| ||| |||||| Sbjct 138666 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGT--ACGGCCGTCTTCGAGC 138609 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | ||||| ||||| ||||| |||||||| || |||||||| ||| Sbjct 138608 TGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGAATC 138549 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| |||||| | | ||| || || | |||| || ||||| Sbjct 138548 TTGGACTTGACATTGTCAATCGTGTCTGAAGACTCAACTTCCAACGTGATAGTCTTGCCA 138489 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| |||||||| Sbjct 138488 GTCAGGGTCTTGACGAAGATCTGCAT 138463 Score = 98.7 bits (108), Expect = 1e-15 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| | | | ||||| |||| Sbjct 138155 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCAAGCT 138097 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | || | || |||||||| || || ||||| |||||||| |||| Sbjct 138096 GCTTGCCGGCGAAGATCAAGCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCT 138037 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | ||||||| | |||||| || | ||||| || ||||||| Sbjct 138036 TGCTCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTGCCGG 137977 Query 133636 T 133636 | Sbjct 137976 T 137976 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || || ||||| || || | ||||| || |||||||| ||||||||||| ||||| Sbjct 138846 GTCTTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGGATGCCCTCCTT 138787 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||| | | || | |||||| ||| ||||| || | ||||| Sbjct 138786 GTCTTGGATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTCCACCTCCAAGGTGAT 138727 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || ||||| || ||||| || ||||| Sbjct 138726 GGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 138691 >seq385 Length=1101030 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 116472 GCACGGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGA 116531 || |||| | ||||| |||| || || |||| || |||||||||||||| || ||| Sbjct 522725 GCGCGGCATGCACGTCCACGCTTTCGGTGACAACACAAACGGCTGCACCTCTGCTGGCCC 522784 Query 116532 ACACTTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGG 116591 |||||||||||| | | || ||||| || ||| ||| || | || |||||||| Sbjct 522785 TCACTTCAACCCCTACAACAAGACGCACGGTGCTCCCGACGACGAGGAGCGCCACGTCGG 522844 Query 116592 TGACCTGGGCAAC 116604 |||| |||||||| Sbjct 522845 TGACTTGGGCAAC 522857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418298297360