Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq393 367 1e-96
seq403 161 1e-34
seq225 127 2e-24
seq385 87.8 2e-12
>seq393
Length=255347
Score = 367 bits (406), Expect = 1e-96
Identities = 1148/1748 (66%), Gaps = 65/1748 (4%)
Strand=Plus/Minus
Query 148047 TTAAACGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTC-G 148105
|| ||||||||| |||||| || || || |||||||| || ||||| || |||| || |
Sbjct 193077 TTCAACGACTGGGACTGGTCGATAAAGGCACCACGGTCGGCAGCCATCTCGATGATTCTG 193018
Query 148106 CTTTATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTC 148165
| | | || ||||| | |||||||| ||| |||| | | |||||| || |
Sbjct 193017 CGCTG-CGAGATTTCCCAAACAGTCTTGTAAAGCTCCTTGGTCTCATCGGGGATATTGGG 192959
Query 148166 GATGCGCTGCACCG-AGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATA 148224
|| || |||| | | || | | || | || | || ||| | || | | |
Sbjct 192958 AATTCG-TGCAATGGAACCACCCTCGGCGATGATGCGGTTCTTCATGTTCTCAGACCACA 192900
Query 148225 GGTTGAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGA 148284
|| | |||| ||||| | || ||| | | || |||||||| ||||| || ||||
Sbjct 192899 GGCCCATGTCGACAAGGTCCTTGAGCAGCCATGGGTTGACCACCTGGAACTCACCAGCGA 192840
Query 148285 GCACGCGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAA 148343
|||| || || ||| || | |||| || | || || || |||||||||| || | |
Sbjct 192839 GCACACGGCG-AGAGTAAATGTTGGAAGTGTATGGCTCGAAGCACTCGTTGTTTCCGAGA 192781
Query 148344 ATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGA 148403
||||||| ||| | || || |||||| || | |||||||||||||| | |||| |
Sbjct 192780 ATCTGCGAGGTGGAGGCAGTTGGCATGGGTGCGATGAGCAGCGAGTTGCGGACACCGTGC 192721
Query 148404 TTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCAC 148463
| || ||| ||| || | ||||||||||||| | || ||| | ||||
Sbjct 192720 TGGGCAATCTTGGCCTTGAGCTCATCCCAGTCCCAGAGATCGGTAGGGGTCTTCTCCCAC 192661
Query 148464 ATGTCGTACTGCAGAATGCCGC-GGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCC 148522
||||||||||| |||||||| || | || | | |||||||| | ||| || ||
Sbjct 192660 ATGTCGTACTGGAGAATGCCCTTGGAGACAGGAGAT-CCCTCGTAGGTCTCGTAAGGACC 192602
Query 148523 GTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAAT 148582
| || || | |||||| || || ||| ||| ||| || |||||| ||
Sbjct 192601 AAGTTCCTTGGCAATATCGCAGGACGAAGTCAGAGCGGCGTGGTAGATGGTCTCGAAGAT 192542
Query 148583 TTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGC 148642
|| |||||||| | ||| | | ||| | |||| ||||| | || ||
Sbjct 192541 CTGAATGTTGAGCTTCTTGGCCTGGTTGGACTCGAAGGGCAGGCGCAGGGCGAGGAAAGC 192482
Query 148643 GTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGC 148702
||||| || |||||||| |||| ||||| || ||||| | |||| | |||||||
Sbjct 192481 ATCGGCCAGACCCTGTACACCCATACCAATAGGTCGGTGGCGGAAGTTGCTGCGGCGCGC 192422
Query 148703 GCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCT 148761
||| | || ||||||||| || || ||||||| |||| ||||| || || |
Sbjct 192421 CTCCTCAACGGGGTAGTGGTTGACCTCAATAATCTTGTTCAAG-TTGCGGGTGACGACTT 192363
Query 148762 TTGTAATTCTGCGCAGC------AATTCAAAATCGTA---CTTGTCATCTACGA-TGCAT 148811
|||| | ||||| || ||||| ||| ||||| || || | || |
Sbjct 192362 GGGTAACCTCGTGCAGCTTTTGAAAGTCAAACTCGCCGCGCTTGTAGTCGACAAATGAA- 192304
Query 148812 CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCT 148871
|| || |||| || || || ||||| || || |||||| || || |||||||
Sbjct 192303 -GG--CAGAGCGAGCGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGCAGTGTACTCG 192247
Query 148872 ACGATCTCGGCGCACAGATTG---CTGCATTTGATCACGCCCACGTTCTTTTGATTGCTC 148928
|| ||||||| ||| || ||| |||| || | ||||| |||||| || ||||||
Sbjct 192246 ACAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGT---GCCCAGGTTCTTCTGGTTGCTC 192190
Query 148929 TTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCC 148988
|||| |||||| || |||||||| ||||| | || ||||| || ||| | ||
Sbjct 192189 TTGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGAGCCTCA 192130
Query 148989 ACTATGAACCGATG-CAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTC------ 149041
| || | | | ||| | ||| ||||| || | |||| || ||||
Sbjct 192129 AGGAT-AGCATACCACAGCTTCTGGGCGCGAAC---CGTCTCG---CGGCCCTTGTTTTG 192077
Query 149042 CTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGG 149101
|| |||||| |||||| |||||| | ||||||||| |||| | ||||| ||
Sbjct 192076 CTTCTCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACCAGG 192017
Query 149102 GCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAG 149161
||||| || |||||||| || | ||| |||||| | | | || |||||||| ||||
Sbjct 192016 GCACTCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTTGGACACGCTTCATGAACAA 191957
Query 149162 ATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTT 149221
||||| | ||| || ||||| | ||| ||||| || || || || |||
Sbjct 191956 GTCGGGAATCCACAGAGCGTAGAAGAGATCGCGGGCGCGAACCTCCTCCTTTCCGTGGTT 191897
Query 149222 GCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAG 149281
|||||||| || | || || | || |||||||| ||||||| ||| | || |
Sbjct 191896 CTTGCGCAGGTCCAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATGGCAAA 191837
Query 149282 CGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCG 149338
|| || ||||||| || ||||||||||||| ||| | ||||||| | || ||
Sbjct 191836 GGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGTATACACG 191777
Query 149339 AACCATAGGTTCAATGCCACTG---GCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCG 149395
| ||| || |||| || | | || ||||| || || |||| ||||
Sbjct 191776 GAGCATGGG---AATGAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTAGGAGCCGGT 191720
Query 149396 CGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA 149455
|| || | | ||| ||||||| || || ||||| || ||| ||||| |||||
Sbjct 191719 GGCACGGATTCGGTGGACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCGCA 191660
Query 149456 -GTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGC 149514
||| ||| || ||||||||| ||||||||||| ||||||| | || ||||
Sbjct 191659 AGTCTT-GAGTGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTCATGTCGATGAGGAAGC 191601
Query 149515 ACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAA 149574
| ||| |||| || || | | ||||| || ||||| ||| || |||||||||||
Sbjct 191600 AGGAGGACATCTGGGGTGATGGTGTGCCTGCGTTGAACAGGGTTGGCGAGGCGTGTGTAA 191541
Query 149575 AATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGA 149634
| || || || ||| ||||| | ||| | | || ||||||||||| || |
Sbjct 191540 AGTACTTTTGCGACATGTAGTCGTAAGTCTCAATGGCCTTTTCAATGTCATCGCCGTGTA 191481
Query 149635 TGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTG---TTTCCAA 149691
|||| | ||| || ||||| ||||| || || || ||||| || || ||| ||| ||
Sbjct 191480 TGCCGACGGCAACTCGCATGAGCATGTGTTGTGGGCGCTCGGCAACCTTGCCATTTACA- 191422
Query 149692 TTTTGAGCAAGTAG--CCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTC 149749
||| | |||| ||| || || |||||| |||| ||| ||| ||||| |||||
Sbjct 191421 --CGGAGGAGGTAGGACCG--CTCGAGCGTCTTGAAGCCGAAGAACTGGTAGTTGAAGTC 191366
Query 149750 GCGGCCGT 149757
||| |||
Sbjct 191365 TCGGTCGT 191358
>seq403
Length=285126
Score = 161 bits (178), Expect = 1e-34
Identities = 349/515 (68%), Gaps = 13/515 (3%)
Strand=Plus/Plus
Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413
||| || || || || ||||| || ||||| || ||||| | | ||| ||||| | |||
Sbjct 107404 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCAT 107463
Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473
|| ||||| |||||| | ||||| |||| || || | ||| | | |||||| ||
Sbjct 107464 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTGGGGTTGCCGAGAGCAAGGAGCAGACG 107523
Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACGCCA 120532
||| || || ||||||||||||| ||||||| || || ||||||||||| || | ||
Sbjct 107524 GTCGGCGACGAACTCAATGTACTGGCACATGAGAGTG-GCGTTCATGCCGAGAAGAGCGC 107582
Query 120533 CCGGCAACGCCGACG-TGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG-- 120589
|| | || || || ||| ||||||| |||||| || || || || ||| || |
Sbjct 107583 AAGGAAGCG-CGTCGCTGAGGAACTCCTGCTCAATCTCGACAGCTTCGGTGATGATAGCC 107641
Query 120590 -CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCA 120648
||| || | || ||| ||| | || | | | | || |||||| |||
Sbjct 107642 TCGACAGCAGCCTTGCTGGGGCGGTTG---TTGAGGAGAG---AGAAGAGCAGGCAGGCA 107695
Query 120649 AAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGC 120708
||||| ||||||| |||||||| || || || ||||||||| || || || ||||||
Sbjct 107696 AAGTCGGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGC 107755
Query 120709 ATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCC 120768
|||| || | |||| | |||| |||| ||| || || ||||| | |||
Sbjct 107756 ATGAGACCACGCTTCTTCAACCAGAAGATGGAGGCGAATGAACCGCTGAAGAAGATACCC 107815
Query 120769 TCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCAC 120828
|| ||| |||||| ||||| | || | ||| || || | ||||| ||||||
Sbjct 107816 TCAACGGCGGCAAACGCGACAAGACGGTTGGCAAAGGTGGAGTTCTTGTCAGAGATCCAT 107875
Query 120829 TTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863
| ||||| || ||||| ||||| | ||| ||
Sbjct 107876 CGAAGAGCCCAATCAGCCTTCTTGCGGATGCAGGG 107910
>seq225
Length=197037
Score = 127 bits (140), Expect = 2e-24
Identities = 153/206 (74%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||| | ||||||||| ||||| || ||||| |||| || || ||| ||| ||||||
Sbjct 138666 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGT--ACGGCCGTCTTCGAGC 138609
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || ||| | ||||| ||||| ||||| |||||||| || |||||||| |||
Sbjct 138608 TGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGAATC 138549
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | |||| |||||| | | ||| || || | |||| || |||||
Sbjct 138548 TTGGACTTGACATTGTCAATCGTGTCTGAAGACTCAACTTCCAACGTGATAGTCTTGCCA 138489
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| ||||||||
Sbjct 138488 GTCAGGGTCTTGACGAAGATCTGCAT 138463
Score = 98.7 bits (108), Expect = 1e-15
Identities = 132/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || ||||| ||| || ||| | | | ||||| ||||
Sbjct 138155 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCAAGCT 138097
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || | || |||||||| || || ||||| |||||||| ||||
Sbjct 138096 GCTTGCCGGCGAAGATCAAGCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCT 138037
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | || | ||||||| | |||||| || | ||||| || |||||||
Sbjct 138036 TGCTCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTGCCGG 137977
Query 133636 T 133636
|
Sbjct 137976 T 137976
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
||| || || ||||| || || | ||||| || |||||||| ||||||||||| |||||
Sbjct 138846 GTCTTCAAGTTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGAGGGATGCCCTCCTT 138787
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| ||| | | || | |||||| ||| ||||| || | |||||
Sbjct 138786 GTCTTGGATCTTGGACTTTACGTTGTCGATGGTGTCGCTGGATTCCACCTCCAAGGTGAT 138727
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||| || || || ||||| || ||||| || |||||
Sbjct 138726 GGTCTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 138691
>seq385
Length=1101030
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 116472 GCACGGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGA 116531
|| |||| | ||||| |||| || || |||| || |||||||||||||| || |||
Sbjct 522725 GCGCGGCATGCACGTCCACGCTTTCGGTGACAACACAAACGGCTGCACCTCTGCTGGCCC 522784
Query 116532 ACACTTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGG 116591
|||||||||||| | | || ||||| || ||| ||| || | || ||||||||
Sbjct 522785 TCACTTCAACCCCTACAACAAGACGCACGGTGCTCCCGACGACGAGGAGCGCCACGTCGG 522844
Query 116592 TGACCTGGGCAAC 116604
|||| ||||||||
Sbjct 522845 TGACTTGGGCAAC 522857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483418298297360
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