Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq225 98.7 2e-15
>seq225
Length=197037
Score = 98.7 bits (108), Expect = 2e-15
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||||||||| || ||||| ||||| |||||| ||||| ||||
Sbjct 138705 CAAGACTCTCACAGGAAAGACCATCACCTTGGAGGTGGAATCCAGCGACACCATCGACAA 138764
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|||||| ||||| ||||| || || || || |||||| ||| | || |||||
Sbjct 138765 CGTAAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAGCAACGTCTCATCTT 138824
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || ||||| | ||||| ||| |||| | | || |||||| ||||||| |||||
Sbjct 138825 TGCTGGTAAGCAACTTGAAGACGGACGGACCCTCTCAGACTACAACATCCAGAAGGAGTC 138884
Query 206364 TACTCTTCA 206372
||| || ||
Sbjct 138885 TACACTCCA 138893
Score = 95.1 bits (104), Expect = 3e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 206192 TCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGC 206251
|||| || || |||||||| | || ||||| ||| ||||| |||| || |||
Sbjct 137974 TCACCGGCAAGACGATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGA 138033
Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311
|||||||| || || || || ||| || ||| ||| | | ||||||||||| |
Sbjct 138034 GCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAACGCTTGATCTTCGCCGGCA 138093
Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371
||||| | || ||||| | || || |||| |||||| ||||||| ||||| || || |
Sbjct 138094 AGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTGC 138153
Query 206372 ACCTTGT 206378
| |||||
Sbjct 138154 ATCTTGT 138160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181814531179294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |