Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq225 98.7 2e-15 >seq225 Length=197037 Score = 98.7 bits (108), Expect = 2e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||||||||| || ||||| ||||| |||||| ||||| |||| Sbjct 138705 CAAGACTCTCACAGGAAAGACCATCACCTTGGAGGTGGAATCCAGCGACACCATCGACAA 138764 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 |||||| ||||| ||||| || || || || |||||| ||| | || ||||| Sbjct 138765 CGTAAAGTCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAGCAACGTCTCATCTT 138824 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || ||||| | ||||| ||| |||| | | || |||||| ||||||| ||||| Sbjct 138825 TGCTGGTAAGCAACTTGAAGACGGACGGACCCTCTCAGACTACAACATCCAGAAGGAGTC 138884 Query 206364 TACTCTTCA 206372 ||| || || Sbjct 138885 TACACTCCA 138893 Score = 95.1 bits (104), Expect = 3e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 206192 TCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGC 206251 |||| || || |||||||| | || ||||| ||| ||||| |||| || ||| Sbjct 137974 TCACCGGCAAGACGATCACCCTTGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGA 138033 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 |||||||| || || || || ||| || ||| ||| | | ||||||||||| | Sbjct 138034 GCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAACGCTTGATCTTCGCCGGCA 138093 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 ||||| | || ||||| | || || |||| |||||| ||||||| ||||| || || | Sbjct 138094 AGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTGC 138153 Query 206372 ACCTTGT 206378 | ||||| Sbjct 138154 ATCTTGT 138160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181814531179294