Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq393 232 6e-56
seq225 98.7 9e-16
seq385 84.2 2e-11
>seq393
Length=255347
Score = 232 bits (256), Expect = 6e-56
Identities = 698/1067 (65%), Gaps = 33/1067 (3%)
Strand=Plus/Minus
Query 147271 AAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGC 147330
|| |||||||||| |||||| | ||| | || |||||||| || |||||||||
Sbjct 192486 AAAGCATCGGCCAGACCCTGTACACCCATACCAATAGGTCGGTGGCGGAAGTTGCTGCGG 192427
Query 147331 TTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACA 147390
||| | | | ||| ||||||||| |||||||||||||| | ||| || ||
Sbjct 192426 CGCGCCTCCTCAACGGGGTAGTGGTTGACCTCAATAATCTTGTTCAAGTTGCGGGTGACG 192367
Query 147391 ACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTC-CCGT-CTTCGACACGTACGC 147448
|||| || | | || || | || ||| || || ||| ||| | || ||
Sbjct 192366 ACTTGGGTAACCTCGTGCAGCTTTTGAAAGTCA-AACTCGCCGCGCTTGTAGTCG-ACAA 192309
Query 147449 ATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACT 147508
|| || |||| || ||||| |||||||| || ||| || | | ||||||
Sbjct 192308 ATGAAGGCAGAGCGAGCGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGCAGTGTACT 192249
Query 147509 GCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTT 147568
|| || |||| ||| |||||| || ||| |||| || | ||| ||||| |
Sbjct 192248 CGACAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCT 192189
Query 147569 TCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAA 147628
| || ||||| || || ||| ||||||| | || || ||||| || | ||||
Sbjct 192188 TGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGAGCCTCAA 192129
Query 147629 CGATAAACCTATG-CAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTT-- 147685
|||| | || ||| | ||| || || ||| || |||||||| |||||
Sbjct 192128 GGATAG-CATACCACAGCTTCTGGGCGCGAACCGTCTC------GCGGCCCTTGTTTTGC 192076
Query 147686 ----CGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGA 147741
|||| | |||||||| | || ||||||||||||||| ||||||||| || ||
Sbjct 192075 TTCTCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACCAGGG 192016
Query 147742 CACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGA 147801
|||| | || |||||||| | ||| | ||| | | | || || ||| ||||
Sbjct 192015 CACTCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTTGGACACGCTTCATGAACAAG 191956
Query 147802 TCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGC--CCATG- 147858
|| || | |||||| ||||| | |||||||| || || | |||| | || ||
Sbjct 191955 TCGGGAATCCACAGAGCGTAGAAGAGATCGCGGGC---GCGAACCTCCTCCTTTCCGTGG 191899
Query 147859 ---TTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACG 147915
||||| || | || | || | ||| || |||||||| || |||| ||||| |
Sbjct 191898 TTCTTGCG---CAGGTCCAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATG 191842
Query 147916 GCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAAC 147972
|| | |||||| ||||| || ||||||||||| | ||| | ||||||| |
Sbjct 191841 GCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGTAT 191782
Query 147973 ACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCG 148032
|| || | |||||| || ||| | | || ||||||||| || | | ||||
Sbjct 191781 ACACGGAGCATGGGAATGAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTAGGAGCCG 191722
Query 148033 CGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCG 148092
||| || | | ||| ||||| | ||||| ||||| || ||| || || ||||
Sbjct 191721 GTGGCACGGATTCGGTGGACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCG 191662
Query 148093 CAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAA 148152
||| | ||| ||||||||||||||||||||| | || | | | | | ||
Sbjct 191661 CAAGTCTTGAGTGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTCATGTCGATGAGGAAG 191602
Query 148153 CACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTA 148212
|| || |||| || || | || || || ||| ||||| || ||||| |||
Sbjct 191601 CAGGAGGACATCTGGGGTGATGGTGTGCCTGCGTTGAACAGGGTTGGCGAGGCGTGTGTA 191542
Query 148213 AACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGA 148272
|| | ||||| ||| | || |||||||| || | ||| ||||| ||||||||
Sbjct 191541 AAGTACTTTTGCGACATGTAGTCGTAAGTCTCAATGGCCTTTTCAATGTCATCGCCGTGT 191482
Query 148273 ATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAAC 148319
||||| | || || |||||||||||||| ||||| || ||||||||
Sbjct 191481 ATGCCGACGGCAACTCGCATGAGCATGTGTTGTGGGCGCTCGGCAAC 191435
>seq225
Length=197037
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||||||| ||||| ||||||||||| ||||| |
Sbjct 138656 GACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCGAGCTGCTTACCAGCG 138597
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| ||||||||||| || ||||| || || || || || ||| || || |
Sbjct 138596 AAGATGAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACA 138537
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | | ||| ||||| | ||| | || || |||||||| || ||
Sbjct 138536 TTGTCAATCGTGTCTGAAGACTCAACTTCCAACGTGATAGTCTTGCCAGTCAGGGTCTTG 138477
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 138476 ACGAAGATCTGCAT 138463
>seq385
Length=1101030
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/123 (76%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 51741 TTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAGCGCCGTG-GTCGCTGCCGGT 51799
||||||||||| |||||||||||| | | ||| ||||| ||||| ||| || |
Sbjct 522856 TTGCCCAAGTCACCGACGTGGCGCTCCTCGTCGTCGGGAGCACCGTGCGTCT-TGTTGTA 522798
Query 51800 GGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCAC 51859
|||||||||||| ||| || || ||||||||||| || |||| ||||| |||| ||
Sbjct 522797 GGGGTTGAAGTGAGGGCCAGCAGAGGTGCAGCCGTTTGTGTTGTCACCGAAAGCGTGGAC 522738
Query 51860 GTG 51862
|||
Sbjct 522737 GTG 522735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476608733537040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |