Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq393 232 6e-56 seq225 98.7 9e-16 seq385 84.2 2e-11 >seq393 Length=255347 Score = 232 bits (256), Expect = 6e-56 Identities = 698/1067 (65%), Gaps = 33/1067 (3%) Strand=Plus/Minus Query 147271 AAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGC 147330 || |||||||||| |||||| | ||| | || |||||||| || ||||||||| Sbjct 192486 AAAGCATCGGCCAGACCCTGTACACCCATACCAATAGGTCGGTGGCGGAAGTTGCTGCGG 192427 Query 147331 TTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACA 147390 ||| | | | ||| ||||||||| |||||||||||||| | ||| || || Sbjct 192426 CGCGCCTCCTCAACGGGGTAGTGGTTGACCTCAATAATCTTGTTCAAGTTGCGGGTGACG 192367 Query 147391 ACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTC-CCGT-CTTCGACACGTACGC 147448 |||| || | | || || | || ||| || || ||| ||| | || || Sbjct 192366 ACTTGGGTAACCTCGTGCAGCTTTTGAAAGTCA-AACTCGCCGCGCTTGTAGTCG-ACAA 192309 Query 147449 ATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACT 147508 || || |||| || ||||| |||||||| || ||| || | | |||||| Sbjct 192308 ATGAAGGCAGAGCGAGCGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGCAGTGTACT 192249 Query 147509 GCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTT 147568 || || |||| ||| |||||| || ||| |||| || | ||| ||||| | Sbjct 192248 CGACAATCTCGGTGCAGAGGTTGGAGCTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTCT 192189 Query 147569 TCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAA 147628 | || ||||| || || ||| ||||||| | || || ||||| || | |||| Sbjct 192188 TGCGGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGAGCCTCAA 192129 Query 147629 CGATAAACCTATG-CAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTT-- 147685 |||| | || ||| | ||| || || ||| || |||||||| ||||| Sbjct 192128 GGATAG-CATACCACAGCTTCTGGGCGCGAACCGTCTC------GCGGCCCTTGTTTTGC 192076 Query 147686 ----CGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGA 147741 |||| | |||||||| | || ||||||||||||||| ||||||||| || || Sbjct 192075 TTCTCGTAGCTCTCGTACAGCGCTTCGAACTCGTCGCCGTAGACATCGGCAAGACCAGGG 192016 Query 147742 CACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGA 147801 |||| | || |||||||| | ||| | ||| | | | || || ||| |||| Sbjct 192015 CACTCGTTGGGGCACATCAGGGTCCAATCGCCGTTCTCTTGGACACGCTTCATGAACAAG 191956 Query 147802 TCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGC--CCATG- 147858 || || | |||||| ||||| | |||||||| || || | |||| | || || Sbjct 191955 TCGGGAATCCACAGAGCGTAGAAGAGATCGCGGGC---GCGAACCTCCTCCTTTCCGTGG 191899 Query 147859 ---TTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACG 147915 ||||| || | || | || | ||| || |||||||| || |||| ||||| | Sbjct 191898 TTCTTGCG---CAGGTCCAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATG 191842 Query 147916 GCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGCACCATGTTGTTAAAC 147972 || | |||||| ||||| || ||||||||||| | ||| | ||||||| | Sbjct 191841 GCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGTAT 191782 Query 147973 ACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCG 148032 || || | |||||| || ||| | | || ||||||||| || | | |||| Sbjct 191781 ACACGGAGCATGGGAATGAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTAGGAGCCG 191722 Query 148033 CGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCG 148092 ||| || | | ||| ||||| | ||||| ||||| || ||| || || |||| Sbjct 191721 GTGGCACGGATTCGGTGGACGTTGAGACCAATACCGCCAGCGGTCTTGGAGATCAAAGCG 191662 Query 148093 CAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAA 148152 ||| | ||| ||||||||||||||||||||| | || | | | | | || Sbjct 191661 CAAGTCTTGAGTGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTCATGTCGATGAGGAAG 191602 Query 148153 CACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTA 148212 || || |||| || || | || || || ||| ||||| || ||||| ||| Sbjct 191601 CAGGAGGACATCTGGGGTGATGGTGTGCCTGCGTTGAACAGGGTTGGCGAGGCGTGTGTA 191542 Query 148213 AACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGA 148272 || | ||||| ||| | || |||||||| || | ||| ||||| |||||||| Sbjct 191541 AAGTACTTTTGCGACATGTAGTCGTAAGTCTCAATGGCCTTTTCAATGTCATCGCCGTGT 191482 Query 148273 ATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAAC 148319 ||||| | || || |||||||||||||| ||||| || |||||||| Sbjct 191481 ATGCCGACGGCAACTCGCATGAGCATGTGTTGTGGGCGCTCGGCAAC 191435 >seq225 Length=197037 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||||||| ||||| ||||||||||| ||||| | Sbjct 138656 GACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCGAGCTGCTTACCAGCG 138597 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||||||||| || ||||| || || || || || ||| || || | Sbjct 138596 AAGATGAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACA 138537 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | | ||| ||||| | ||| | || || |||||||| || || Sbjct 138536 TTGTCAATCGTGTCTGAAGACTCAACTTCCAACGTGATAGTCTTGCCAGTCAGGGTCTTG 138477 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 138476 ACGAAGATCTGCAT 138463 >seq385 Length=1101030 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 51741 TTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAGCGCCGTG-GTCGCTGCCGGT 51799 ||||||||||| |||||||||||| | | ||| ||||| ||||| ||| || | Sbjct 522856 TTGCCCAAGTCACCGACGTGGCGCTCCTCGTCGTCGGGAGCACCGTGCGTCT-TGTTGTA 522798 Query 51800 GGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCAC 51859 |||||||||||| ||| || || ||||||||||| || |||| ||||| |||| || Sbjct 522797 GGGGTTGAAGTGAGGGCCAGCAGAGGTGCAGCCGTTTGTGTTGTCACCGAAAGCGTGGAC 522738 Query 51860 GTG 51862 ||| Sbjct 522737 GTG 522735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608733537040