Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08-
03] 414 sequences; 35,173,254 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq171 105 8e-18
>seq171
Length=1567143
Score = 105 bits (116), Expect = 8e-18
Identities = 266/400 (67%), Gaps = 6/400 (2%)
Strand=Plus/Minus
Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165
|| ||||||||| | || || ||||||||||||||||| | || || |||
Sbjct 618523 ACATAAAACTGGGCAAACATATGACACGGCGGCAGCGCCATCTTCTTGATATCGGCCGGG 618464
Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA-C 147224
||||| || | || | | || | | | || || |||| | || ||||||| |
Sbjct 618463 TTCCACGCGGTGAGGATAATGCGGCGGTCATATGGTTTATTCTTCAGCTTGTCGATAATC 618404
Query 147225 CCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCC--ACGTACCTG 147282
|| | |||||| || |||||||||||| |||| | || ||||| || ||||
Sbjct 618403 TCAGC-CAGCTGATCGACGCCCTGGCCCTCGTAATCTG--CCGCATGCCCTTTGTACTCT 618347
Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342
|| || || |||| ||| ||||| ||||| || || ||||| ||||| | || ||||
Sbjct 618346 GCGCCGAAATGCCGCCATTGGAAACCGTATACGGGGCCCAGCTCGCCCGTCTCGTAGTGC 618287
Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402
|||| |||| | | | |||| ||||| || |||| | |||||||||| | |||
Sbjct 618286 GAGAGGCCCACGCTGTCGAGATACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGATCCCC 618227
Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAA 147462
| | |||||| | || |||| || || ||||||||| ||||| | |
Sbjct 618226 GCGTCTGAGAGCGGCCCGCTGTGCGTGCTTCCGGCGACGAACCAGAGAAGCTCGCCGATT 618167
Query 147463 ACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502
|| | | | || |||| ||| ||||| || |||||||
Sbjct 618166 ACGGCGCGCAGGAATACCCGCTTCGTGGTGAGGAGGGGGA 618127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583484980449600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |