Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stemphylium_20lycopersici_20[genbank_20GCA_5F001191545.1_202015-08- 03] 414 sequences; 35,173,254 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq171 105 8e-18 >seq171 Length=1567143 Score = 105 bits (116), Expect = 8e-18 Identities = 266/400 (67%), Gaps = 6/400 (2%) Strand=Plus/Minus Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 || ||||||||| | || || ||||||||||||||||| | || || ||| Sbjct 618523 ACATAAAACTGGGCAAACATATGACACGGCGGCAGCGCCATCTTCTTGATATCGGCCGGG 618464 Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA-C 147224 ||||| || | || | | || | | | || || |||| | || ||||||| | Sbjct 618463 TTCCACGCGGTGAGGATAATGCGGCGGTCATATGGTTTATTCTTCAGCTTGTCGATAATC 618404 Query 147225 CCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCC--ACGTACCTG 147282 || | |||||| || |||||||||||| |||| | || ||||| || |||| Sbjct 618403 TCAGC-CAGCTGATCGACGCCCTGGCCCTCGTAATCTG--CCGCATGCCCTTTGTACTCT 618347 Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 || || || |||| ||| ||||| ||||| || || ||||| ||||| | || |||| Sbjct 618346 GCGCCGAAATGCCGCCATTGGAAACCGTATACGGGGCCCAGCTCGCCCGTCTCGTAGTGC 618287 Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402 |||| |||| | | | |||| ||||| || |||| | |||||||||| | ||| Sbjct 618286 GAGAGGCCCACGCTGTCGAGATACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGATCCCC 618227 Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAA 147462 | | |||||| | || |||| || || ||||||||| ||||| | | Sbjct 618226 GCGTCTGAGAGCGGCCCGCTGTGCGTGCTTCCGGCGACGAACCAGAGAAGCTCGCCGATT 618167 Query 147463 ACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 || | | | || |||| ||| ||||| || ||||||| Sbjct 618166 ACGGCGCGCAGGAATACCCGCTTCGTGGTGAGGAGGGGGA 618127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484980449600